RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 NUFIP2Q7Z417 695 aaKnown RBP11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 CDX2Q99626 313 aaPredicted RBP11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SAP30LQ9HAJ7 183 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 LPAR3Q9UBY5 353 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 TRIP11Q15643 1979 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 TUBAL3A6NHL2 446 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 PSG2P11465 335 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 PPOXP50336 477 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 TPRX1Q8N7U7 411 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 GRAMD2BQ96HH9 432 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 GNG7O60262 68 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 CCKARP32238 428 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 PSG6Q00889 435 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 ZNF841Q6ZN19 808 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 OR6X1Q8NH79 312 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SLC25A40Q8TBP6 338 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SLC7A10Q9NS82 523 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SULT1A2P50226 295 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 EFNB2P52799 333 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 HLA-DRB3P79483 266 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 LYZL2Q7Z4W2 148 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SPICQ8N5J4 248 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 TMUB1Q9BVT8 246 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 MS4A7Q9GZW8 240 aaPredicted RBP11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 CLN8Q9UBY8 286 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 NKX2-6A6NCS4 301 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 C5orf52A6NGY3 159 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 GP1BAP07359 652 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 CELA2AP08217 269 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 DLK1P80370 383 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 TMEM183BQ1AE95 376 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 Q6ZN92 141 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 OR11H7Q8NGC8 314 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 OR8A1Q8NGG7 326 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 OR4S2Q8NH73 311 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 ASB13Q8WXK3 278 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 CENPVL1A0A0U1RR11 272 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 RPS4Y1P22090 263 aaKnown RBP11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 INPP5JQ15735 1006 aaPredicted RBP11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 GSX1Q9H4S2 264 aaPredicted RBP11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 OR6C3Q9NZP0 311 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 RABAC1Q9UI14 185 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 TRAV8-7A0A075B6U6 113 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 TRAV38-1A0A0B4J264 116 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 MDKP21741 143 aaPredicted RBP11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 B2MP61769 119 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 ATG4DQ86TL0 474 aaPredicted RBP11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 OR4D10Q8NGI6 311 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 WDFY2Q96P53 400 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 PCGF1Q9BSM1 259 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 OR2H1Q9GZK4 316 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SLC52A3Q9NQ40 469 aa11.92□□□□□ -0.5
CHRFAM7A-201ENST00000299847 TFPI2P48307 235 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 NAAAQ02083 359 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 RFLNBQ8N5W9 214 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 ARL6IP6Q8N6S5 226 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 MRPL37Q9BZE1 423 aaKnown RBP11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 CACFD1Q9UGQ2 172 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 KIAA1551Q9HCM1 1747 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 DOCK1Q14185 1865 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 M0R296 226 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 LY86O95711 162 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 TMEM52Q8NDY8 209 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 DTD1Q8TEA8 209 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SNX22Q96L94 193 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 ANXA10Q9UJ72 324 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 V9GYH0 126 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 OR4C46A6NHA9 309 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SIGLEC5O15389 551 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SIGLEC14Q08ET2 396 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SLC25A30Q5SVS4 291 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 DMKNQ6E0U4 476 aaPredicted RBP11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 OR4X1Q8NH49 305 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 PIK3IP1Q96FE7 263 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 RGS13O14921 159 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 PAGE4O60829 102 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SRSF10O75494 262 aaKnown RBP11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SCN7AQ01118 1682 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SLC26A10Q8NG04 563 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 FAM222BQ8WU58 562 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 CD160O95971 181 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 RCC1P18754 421 aaPredicted RBP11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 COL10A1Q03692 680 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 RHBDD2Q6NTF9 364 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 D2HGDHQ8N465 521 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 NTMQ9P121 344 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 VSIG4Q9Y279 399 aa11.91□□□□□ -0.5
CHRFAM7A-201ENST00000299847 CGB1A6NKQ9 187 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 FAM157CP0CG43 387 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SMUG1Q53HV7 270 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 JMJD6Q6NYC1 403 aaPredicted RBP11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 OR2D3Q8NGH3 330 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 GPR35Q9HC97 309 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 TNFSF14O43557 240 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SYNGR2O43760 224 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 F12P00748 615 aaPredicted RBP11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 PEBP1P30086 187 aaKnown RBP11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 RPL30P62888 115 aaKnown RBP11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 DGAT2L7PQ6IED9 249 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 RAB1CQ92928 201 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms