RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CHST4Q8NCG5 386 aa17.55■□□□□ 0.4
SMCO4-201ENST00000298966 OR10AD1Q8NGE0 317 aa17.55■□□□□ 0.4
SMCO4-201ENST00000298966 NANPQ8TBE9 248 aa17.55■□□□□ 0.4
SMCO4-201ENST00000298966 SLAMF9Q96A28 289 aa17.55■□□□□ 0.4
SMCO4-201ENST00000298966 TMPRSS13Q9BYE2 586 aa17.55■□□□□ 0.4
SMCO4-201ENST00000298966 RBFOX1Q9NWB1 397 aaKnown RBP17.55■□□□□ 0.4
SMCO4-201ENST00000298966 MTFP1Q9UDX5 166 aa17.55■□□□□ 0.4
SMCO4-201ENST00000298966 ST3GAL6Q9Y274 331 aa17.55■□□□□ 0.4
SMCO4-201ENST00000298966 A0A0A6YYD4 124 aa17.54■□□□□ 0.4
SMCO4-201ENST00000298966 A0A1W2PP11 408 aa17.54■□□□□ 0.4
SMCO4-201ENST00000298966 F5H5P2 479 aa17.54■□□□□ 0.4
SMCO4-201ENST00000298966 H0YL77 283 aa17.54■□□□□ 0.4
SMCO4-201ENST00000298966 RBBP9O75884 186 aa17.54■□□□□ 0.4
SMCO4-201ENST00000298966 LPLP06858 475 aa17.54■□□□□ 0.4
SMCO4-201ENST00000298966 BCL3P20749 454 aa17.54■□□□□ 0.4
SMCO4-201ENST00000298966 MAB21L1Q13394 359 aa17.54■□□□□ 0.4
SMCO4-201ENST00000298966 MIDNQ504T8 468 aa17.54■□□□□ 0.4
SMCO4-201ENST00000298966 RNASE12Q5GAN4 147 aaKnown RBP17.54■□□□□ 0.4
SMCO4-201ENST00000298966 Q6ZTK2 550 aa17.54■□□□□ 0.4
SMCO4-201ENST00000298966 NRARPQ7Z6K4 114 aa17.54■□□□□ 0.4
SMCO4-201ENST00000298966 FAM58AQ8N1B3 248 aa17.54■□□□□ 0.4
SMCO4-201ENST00000298966 POC1AQ8NBT0 407 aa17.54■□□□□ 0.4
SMCO4-201ENST00000298966 GPX8Q8TED1 209 aa17.54■□□□□ 0.4
SMCO4-201ENST00000298966 ZNF665Q9H7R5 613 aa17.54■□□□□ 0.4
SMCO4-201ENST00000298966 FN3KRPQ9HA64 309 aa17.54■□□□□ 0.4
SMCO4-201ENST00000298966 RASL12Q9NYN1 266 aa17.54■□□□□ 0.4
SMCO4-201ENST00000298966 LINC00854A0A1B0GVQ3 168 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 CENPXA8MT69 81 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 J3QLI3 93 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 MFNGO00587 321 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 SYNGR1O43759 233 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 GLAP06280 429 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 GRPP07492 148 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 TNFRSF1AP19438 455 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 FPR2P25090 351 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 BLVRBP30043 206 aaPredicted RBP17.53■□□□□ 0.4
SMCO4-201ENST00000298966 CBX5P45973 191 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 ERVK11-1P61568 191 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 PCGF3Q3KNV8 242 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 CDNFQ49AH0 187 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 SPIN3Q5JUX0 258 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 CCBE1Q6UXH8 406 aaPredicted RBP17.53■□□□□ 0.4
SMCO4-201ENST00000298966 RAB39BQ96DA2 213 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 MEGF10Q96KG7 1140 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 NEDD4LQ96PU5 975 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 NRIP2Q9BQI9 281 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 NICN1Q9BSH3 213 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 IFT22Q9H7X7 185 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 PPIAL4AQ9Y536 164 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 CACNG2Q9Y698 323 aa17.53■□□□□ 0.4
SMCO4-201ENST00000298966 ANKRD20A5PA0PJZ0 165 aa17.52■□□□□ 0.4
SMCO4-201ENST00000298966 A6NLC8 198 aa17.52■□□□□ 0.4
SMCO4-201ENST00000298966 C17orf100A8MU93 164 aa17.52■□□□□ 0.4
SMCO4-201ENST00000298966 CDIPTO14735 213 aa17.52■□□□□ 0.4
SMCO4-201ENST00000298966 SOCS1O15524 211 aa17.52■□□□□ 0.4
SMCO4-201ENST00000298966 RP2O75695 350 aa17.52■□□□□ 0.4
SMCO4-201ENST00000298966 NPBWR2P48146 333 aa17.52■□□□□ 0.4
SMCO4-201ENST00000298966 DCAF12L2Q5VW00 463 aa17.52■□□□□ 0.4
SMCO4-201ENST00000298966 FAM90A1Q86YD7 464 aa17.52■□□□□ 0.4
SMCO4-201ENST00000298966 EMG1Q92979 244 aaKnown RBP17.52■□□□□ 0.4
SMCO4-201ENST00000298966 SEH1LQ96EE3 360 aa17.52■□□□□ 0.4
SMCO4-201ENST00000298966 EGLN1Q9GZT9 426 aa17.52■□□□□ 0.4
SMCO4-201ENST00000298966 GLS2Q9UI32 602 aa17.52■□□□□ 0.4
SMCO4-201ENST00000298966 MEIOCA2RUB1 952 aa17.51■□□□□ 0.39
SMCO4-201ENST00000298966 NAP1L6A6NFF2 107 aa17.51■□□□□ 0.39
SMCO4-201ENST00000298966 IFNL4K9M1U5 179 aa17.51■□□□□ 0.39
SMCO4-201ENST00000298966 PDCD6O75340 191 aa17.51■□□□□ 0.39
SMCO4-201ENST00000298966 IGHV1-46P01743 117 aa17.51■□□□□ 0.39
SMCO4-201ENST00000298966 CSF1P09603 554 aa17.51■□□□□ 0.39
SMCO4-201ENST00000298966 PTHLHP12272 177 aa17.51■□□□□ 0.39
SMCO4-201ENST00000298966 SPNP16150 400 aa17.51■□□□□ 0.39
SMCO4-201ENST00000298966 FUT3P21217 361 aa17.51■□□□□ 0.39
SMCO4-201ENST00000298966 TMEM50BP56557 158 aa17.51■□□□□ 0.39
SMCO4-201ENST00000298966 GNG2P59768 71 aa17.51■□□□□ 0.39
SMCO4-201ENST00000298966 TNFAIP6P98066 277 aaPredicted RBP17.51■□□□□ 0.39
SMCO4-201ENST00000298966 TAF9Q16594 264 aa17.51■□□□□ 0.39
SMCO4-201ENST00000298966 RBMS3Q6XE24 437 aaKnown RBP17.51■□□□□ 0.39
SMCO4-201ENST00000298966 DUSP18Q8NEJ0 188 aa17.51■□□□□ 0.39
SMCO4-201ENST00000298966 ENKURQ8TC29 256 aa17.51■□□□□ 0.39
SMCO4-201ENST00000298966 OR2V2Q96R30 315 aa17.51■□□□□ 0.39
SMCO4-201ENST00000298966 SEBOXQ9HB31 216 aaPredicted RBP17.51■□□□□ 0.39
SMCO4-201ENST00000298966 HES4Q9HCC6 221 aa17.51■□□□□ 0.39
SMCO4-201ENST00000298966 PLEKHJ1Q9NW61 149 aa17.51■□□□□ 0.39
SMCO4-201ENST00000298966 VWFP04275 2813 aa17.5■□□□□ 0.39
SMCO4-201ENST00000298966 SPRY3O43610 288 aa17.5■□□□□ 0.39
SMCO4-201ENST00000298966 GABRR1P24046 479 aa17.5■□□□□ 0.39
SMCO4-201ENST00000298966 CHATP28329 748 aa17.5■□□□□ 0.39
SMCO4-201ENST00000298966 RCVRNP35243 200 aa17.5■□□□□ 0.39
SMCO4-201ENST00000298966 FAUP35544 74 aaKnown RBP17.5■□□□□ 0.39
SMCO4-201ENST00000298966 OLFML2AQ68BL7 652 aa17.5■□□□□ 0.39
SMCO4-201ENST00000298966 WDR82Q6UXN9 313 aa17.5■□□□□ 0.39
SMCO4-201ENST00000298966 C11orf53Q8IXP5 236 aa17.5■□□□□ 0.39
SMCO4-201ENST00000298966 Q8TCH9 128 aa17.5■□□□□ 0.39
SMCO4-201ENST00000298966 C22orf15Q8WYQ4 148 aa17.5■□□□□ 0.39
SMCO4-201ENST00000298966 ST8SIA4Q92187 359 aa17.5■□□□□ 0.39
SMCO4-201ENST00000298966 ARHGAP5-AS1Q96IT6 56 aa17.5■□□□□ 0.39
SMCO4-201ENST00000298966 PECRQ9BY49 303 aa17.5■□□□□ 0.39
SMCO4-201ENST00000298966 KLK11Q9UBX7 282 aa17.5■□□□□ 0.39
SMCO4-201ENST00000298966 TMEM235A6NFC5 223 aa17.49■□□□□ 0.39
SMCO4-201ENST00000298966 POM121CA8CG34 1229 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms