RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 MEF2DQ14814 521 aa17.34■□□□□ 0.37
PACSIN3-201ENST00000298838 TENM4Q6N022 2769 aa17.34■□□□□ 0.37
PACSIN3-201ENST00000298838 C17orf107Q6ZR85 190 aa17.34■□□□□ 0.37
PACSIN3-201ENST00000298838 ZNF561Q8N587 486 aa17.34■□□□□ 0.37
PACSIN3-201ENST00000298838 TMEM82A0PJX8 343 aa17.33■□□□□ 0.37
PACSIN3-201ENST00000298838 M0QYG6 137 aa17.33■□□□□ 0.37
PACSIN3-201ENST00000298838 ZNF737O75373 536 aa17.33■□□□□ 0.37
PACSIN3-201ENST00000298838 CDKN1AP38936 164 aa17.33■□□□□ 0.37
PACSIN3-201ENST00000298838 OR3A1P47881 315 aa17.33■□□□□ 0.37
PACSIN3-201ENST00000298838 CHRFAM7AQ494W8 412 aa17.33■□□□□ 0.37
PACSIN3-201ENST00000298838 CCBE1Q6UXH8 406 aaPredicted RBP17.33■□□□□ 0.37
PACSIN3-201ENST00000298838 ZNF497Q6ZNH5 498 aa17.33■□□□□ 0.37
PACSIN3-201ENST00000298838 PPP1R35Q8TAP8 253 aa17.33■□□□□ 0.37
PACSIN3-201ENST00000298838 PLPPR1Q8TBJ4 325 aa17.33■□□□□ 0.37
PACSIN3-201ENST00000298838 MRPL30Q8TCC3 161 aaKnown RBP17.33■□□□□ 0.37
PACSIN3-201ENST00000298838 OCEL1Q9H607 264 aa17.33■□□□□ 0.37
PACSIN3-201ENST00000298838 ZNF286AQ9HBT8 521 aa17.33■□□□□ 0.37
PACSIN3-201ENST00000298838 USP9YO00507 2555 aaPredicted RBP17.33■□□□□ 0.36
PACSIN3-201ENST00000298838 TRBV6-6A0A0A6YYG2 114 aa17.33■□□□□ 0.36
PACSIN3-201ENST00000298838 GYPAP02724 150 aa17.33■□□□□ 0.36
PACSIN3-201ENST00000298838 CSN2P05814 226 aa17.33■□□□□ 0.36
PACSIN3-201ENST00000298838 SPNP16150 400 aa17.33■□□□□ 0.36
PACSIN3-201ENST00000298838 COL8A2P25067 703 aa17.33■□□□□ 0.36
PACSIN3-201ENST00000298838 GIFP27352 417 aa17.33■□□□□ 0.36
PACSIN3-201ENST00000298838 OR5AP2Q8NGF4 316 aa17.33■□□□□ 0.36
PACSIN3-201ENST00000298838 OR5H2Q8NGV7 314 aa17.33■□□□□ 0.36
PACSIN3-201ENST00000298838 SDSLQ96GA7 329 aa17.33■□□□□ 0.36
PACSIN3-201ENST00000298838 SNX22Q96L94 193 aa17.33■□□□□ 0.36
PACSIN3-201ENST00000298838 TINAGL1Q9GZM7 467 aaPredicted RBP17.33■□□□□ 0.36
PACSIN3-201ENST00000298838 DPAGT1Q9H3H5 408 aa17.33■□□□□ 0.36
PACSIN3-201ENST00000298838 ZNF665Q9H7R5 613 aa17.33■□□□□ 0.36
PACSIN3-201ENST00000298838 ING3Q9NXR8 418 aa17.33■□□□□ 0.36
PACSIN3-201ENST00000298838 ANXA10Q9UJ72 324 aa17.33■□□□□ 0.36
PACSIN3-201ENST00000298838 NKX6-3A6NJ46 265 aa17.32■□□□□ 0.36
PACSIN3-201ENST00000298838 POM121CA8CG34 1229 aa17.32■□□□□ 0.36
PACSIN3-201ENST00000298838 LYNX1G3V0Z9 82 aa17.32■□□□□ 0.36
PACSIN3-201ENST00000298838 LYNX1P0DP58 116 aa17.32■□□□□ 0.36
PACSIN3-201ENST00000298838 DAOP14920 347 aa17.32■□□□□ 0.36
PACSIN3-201ENST00000298838 ARPC4P59998 168 aa17.32■□□□□ 0.36
PACSIN3-201ENST00000298838 GRK1Q15835 563 aa17.32■□□□□ 0.36
PACSIN3-201ENST00000298838 SRSF7Q16629 238 aaKnown RBP eCLIP17.32■□□□□ 0.36
PACSIN3-201ENST00000298838 ZNF782Q6ZMW2 699 aaPredicted RBP17.32■□□□□ 0.36
PACSIN3-201ENST00000298838 Q6ZPA2 131 aa17.32■□□□□ 0.36
PACSIN3-201ENST00000298838 Q6ZS49 121 aa17.32■□□□□ 0.36
PACSIN3-201ENST00000298838 GAPTQ8N292 157 aa17.32■□□□□ 0.36
PACSIN3-201ENST00000298838 DUSP18Q8NEJ0 188 aa17.32■□□□□ 0.36
PACSIN3-201ENST00000298838 OR56B4Q8NH76 319 aa17.32■□□□□ 0.36
PACSIN3-201ENST00000298838 SHARPINQ9H0F6 387 aa17.32■□□□□ 0.36
PACSIN3-201ENST00000298838 DNTTIP1Q9H147 329 aa17.32■□□□□ 0.36
PACSIN3-201ENST00000298838 Q9N2K0 584 aa17.32■□□□□ 0.36
PACSIN3-201ENST00000298838 COPZ2Q9P299 210 aa17.32■□□□□ 0.36
PACSIN3-201ENST00000298838 IGKV1D-8A0A087WSZ0 117 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 TMEM30CPA0ZSE6 113 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 RP2O75695 350 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 PMP2P02689 132 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 AMY2AP04746 511 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 OR3A3P47888 321 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 BTG1P62324 171 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 KCNJ8Q15842 424 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 PLA1AQ53H76 456 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 VAX1Q5SQQ9 334 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 RSBN1Q5VWQ0 802 aaPredicted RBP17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 ZNF788Q6ZQV5 615 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 MOB1BQ7L9L4 216 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 PEG10Q86TG7 708 aaKnown RBP17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 ZNRF1Q8ND25 227 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 MAB21L2Q9Y586 359 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 HELZ2Q9BYK8 2649 aaKnown RBP17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 DISC1C4P0D8 188 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 K7N7A8 449 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 LY6HO94772 140 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 IFNA6P05013 189 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 CCR6P51684 374 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 PAX5Q02548 391 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 ATPAF1Q5TC12 328 aaPredicted RBP17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 PLET1Q6UQ28 207 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 OR51S1Q8NGJ8 323 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 GAFA1Q96PS6 74 aa17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 MYOZ1Q9NP98 299 aaPredicted RBP17.31■□□□□ 0.36
PACSIN3-201ENST00000298838 KIR2DS1A0A191URI9 304 aa17.3■□□□□ 0.36
PACSIN3-201ENST00000298838 OVOL3O00110 214 aa17.3■□□□□ 0.36
PACSIN3-201ENST00000298838 MGST3O14880 152 aa17.3■□□□□ 0.36
PACSIN3-201ENST00000298838 TK1P04183 234 aa17.3■□□□□ 0.36
PACSIN3-201ENST00000298838 KIR2DS4P43632 304 aa17.3■□□□□ 0.36
PACSIN3-201ENST00000298838 IL13RA1P78552 427 aa17.3■□□□□ 0.36
PACSIN3-201ENST00000298838 AESQ08117 197 aa17.3■□□□□ 0.36
PACSIN3-201ENST00000298838 KIR2DS1Q14954 304 aa17.3■□□□□ 0.36
PACSIN3-201ENST00000298838 ZMYND11Q15326 602 aa17.3■□□□□ 0.36
PACSIN3-201ENST00000298838 SLC35E4Q6ICL7 350 aa17.3■□□□□ 0.36
PACSIN3-201ENST00000298838 Q6ZNX1 250 aa17.3■□□□□ 0.36
PACSIN3-201ENST00000298838 GLCCI1Q86VQ1 547 aa17.3■□□□□ 0.36
PACSIN3-201ENST00000298838 OR5D13Q8NGL4 314 aa17.3■□□□□ 0.36
PACSIN3-201ENST00000298838 CCL13Q99616 98 aa17.3■□□□□ 0.36
PACSIN3-201ENST00000298838 CCL19Q99731 98 aa17.3■□□□□ 0.36
PACSIN3-201ENST00000298838 FAM234AQ9H0X4 552 aa17.3■□□□□ 0.36
PACSIN3-201ENST00000298838 TRAPPC2LQ9UL33 140 aa17.3■□□□□ 0.36
PACSIN3-201ENST00000298838 AKAP6Q13023 2319 aa17.29■□□□□ 0.36
PACSIN3-201ENST00000298838 SIGLEC5O15389 551 aa17.29■□□□□ 0.36
PACSIN3-201ENST00000298838 TMPRSS2O15393 492 aa17.29■□□□□ 0.36
PACSIN3-201ENST00000298838 FSTL3O95633 263 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms