RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 C20orf204Q6ZNR8 217 aa20.58■□□□□ 0.89
GTF2A1-201ENST00000298173 Q6ZNX1 250 aa20.58■□□□□ 0.89
GTF2A1-201ENST00000298173 Q6ZS49 121 aa20.58■□□□□ 0.89
GTF2A1-201ENST00000298173 DEFB108BQ8NET1 73 aa20.58■□□□□ 0.89
GTF2A1-201ENST00000298173 MRPL30Q8TCC3 161 aaKnown RBP20.58■□□□□ 0.89
GTF2A1-201ENST00000298173 MAFIPQ8WZ33 124 aa20.58■□□□□ 0.89
GTF2A1-201ENST00000298173 ZNF701Q9NV72 531 aaPredicted RBP20.58■□□□□ 0.89
GTF2A1-201ENST00000298173 MAB21L2Q9Y586 359 aa20.58■□□□□ 0.89
GTF2A1-201ENST00000298173 FSTL3O95633 263 aa20.58■□□□□ 0.88
GTF2A1-201ENST00000298173 TBPP20226 339 aa20.58■□□□□ 0.88
GTF2A1-201ENST00000298173 OR3A1P47881 315 aa20.58■□□□□ 0.88
GTF2A1-201ENST00000298173 KCNJ3P48549 501 aa20.58■□□□□ 0.88
GTF2A1-201ENST00000298173 PAX5Q02548 391 aa20.58■□□□□ 0.88
GTF2A1-201ENST00000298173 ZNF880Q6PDB4 577 aa20.58■□□□□ 0.88
GTF2A1-201ENST00000298173 CCBE1Q6UXH8 406 aaPredicted RBP20.58■□□□□ 0.88
GTF2A1-201ENST00000298173 ZNF788Q6ZQV5 615 aa20.58■□□□□ 0.88
GTF2A1-201ENST00000298173 ZNF295-AS1Q8N0V1 137 aa20.58■□□□□ 0.88
GTF2A1-201ENST00000298173 OR4K15Q8NH41 348 aa20.58■□□□□ 0.88
GTF2A1-201ENST00000298173 SNX22Q96L94 193 aa20.58■□□□□ 0.88
GTF2A1-201ENST00000298173 TINAGL1Q9GZM7 467 aaPredicted RBP20.58■□□□□ 0.88
GTF2A1-201ENST00000298173 DLL4Q9NR61 685 aa20.58■□□□□ 0.88
GTF2A1-201ENST00000298173 UTP20O75691 2785 aaKnown RBP20.57■□□□□ 0.88
GTF2A1-201ENST00000298173 TRAV38-1A0A0B4J264 116 aa20.57■□□□□ 0.88
GTF2A1-201ENST00000298173 LYNX1G3V0Z9 82 aa20.57■□□□□ 0.88
GTF2A1-201ENST00000298173 RAB3DO95716 219 aa20.57■□□□□ 0.88
GTF2A1-201ENST00000298173 CSN2P05814 226 aa20.57■□□□□ 0.88
GTF2A1-201ENST00000298173 ZNF735P0CB33 412 aa20.57■□□□□ 0.88
GTF2A1-201ENST00000298173 LYNX1P0DP58 116 aa20.57■□□□□ 0.88
GTF2A1-201ENST00000298173 FAUP35544 74 aaKnown RBP20.57■□□□□ 0.88
GTF2A1-201ENST00000298173 GABRA2P47869 451 aa20.57■□□□□ 0.88
GTF2A1-201ENST00000298173 Q9N2K0 584 aa20.57■□□□□ 0.88
GTF2A1-201ENST00000298173 FAM240BA0A1B0GVZ2 78 aa20.56■□□□□ 0.88
GTF2A1-201ENST00000298173 HRH1P35367 487 aa20.56■□□□□ 0.88
GTF2A1-201ENST00000298173 CDKN1AP38936 164 aa20.56■□□□□ 0.88
GTF2A1-201ENST00000298173 RSBN1Q5VWQ0 802 aaPredicted RBP20.56■□□□□ 0.88
GTF2A1-201ENST00000298173 ZNF561Q8N587 486 aa20.56■□□□□ 0.88
GTF2A1-201ENST00000298173 ANXA10Q9UJ72 324 aa20.56■□□□□ 0.88
GTF2A1-201ENST00000298173 K7N7A8 449 aa20.55■□□□□ 0.88
GTF2A1-201ENST00000298173 M0QYG6 137 aa20.55■□□□□ 0.88
GTF2A1-201ENST00000298173 GYPAP02724 150 aa20.55■□□□□ 0.88
GTF2A1-201ENST00000298173 GIFP27352 417 aa20.55■□□□□ 0.88
GTF2A1-201ENST00000298173 OR5AP2Q8NGF4 316 aa20.55■□□□□ 0.88
GTF2A1-201ENST00000298173 GAFA1Q96PS6 74 aa20.55■□□□□ 0.88
GTF2A1-201ENST00000298173 DNTTIP1Q9H147 329 aa20.55■□□□□ 0.88
GTF2A1-201ENST00000298173 USF3Q68DE3 2245 aa20.55■□□□□ 0.88
GTF2A1-201ENST00000298173 USP9YO00507 2555 aaPredicted RBP20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 H7C1Q1 480 aa20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 MEF2DQ14814 521 aa20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 ATXN7L3Q14CW9 347 aaPredicted RBP20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 RNASE10Q5GAN6 216 aaKnown RBP20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 VAX1Q5SQQ9 334 aa20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 SLC35E4Q6ICL7 350 aa20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 GLCCI1Q86VQ1 547 aa20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 ZNRF1Q8ND25 227 aa20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 OR56B4Q8NH76 319 aa20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 ENKURQ8TC29 256 aa20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 COQ2Q96H96 371 aa20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 ZNF665Q9H7R5 613 aa20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 CHMP1AQ9HD42 196 aaPredicted RBP20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 MCUBQ9NWR8 336 aa20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 LY6HO94772 140 aa20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 F12P00748 615 aaPredicted RBP20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 PMP2P02689 132 aa20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 CCR6P51684 374 aa20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 ACTBL2Q562R1 376 aa20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 ASCC1Q8N9N2 400 aaKnown RBP20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 CCL13Q99616 98 aa20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 SLC6A7Q99884 636 aa20.54■□□□□ 0.88
GTF2A1-201ENST00000298173 TENM4Q6N022 2769 aa20.53■□□□□ 0.88
GTF2A1-201ENST00000298173 TK1P04183 234 aa20.53■□□□□ 0.88
GTF2A1-201ENST00000298173 DAOP14920 347 aa20.53■□□□□ 0.88
GTF2A1-201ENST00000298173 TAS2R46P59540 309 aa20.53■□□□□ 0.88
GTF2A1-201ENST00000298173 AESQ08117 197 aa20.53■□□□□ 0.88
GTF2A1-201ENST00000298173 ZMYND11Q15326 602 aa20.53■□□□□ 0.88
GTF2A1-201ENST00000298173 OVCH2Q7RTZ1 564 aa20.53■□□□□ 0.88
GTF2A1-201ENST00000298173 PPP1R35Q8TAP8 253 aa20.53■□□□□ 0.88
GTF2A1-201ENST00000298173 DPAGT1Q9H3H5 408 aa20.53■□□□□ 0.88
GTF2A1-201ENST00000298173 ZNF286AQ9HBT8 521 aa20.53■□□□□ 0.88
GTF2A1-201ENST00000298173 MBNL3Q9NUK0 354 aaKnown RBP20.53■□□□□ 0.88
GTF2A1-201ENST00000298173 AKAP6Q13023 2319 aa20.53■□□□□ 0.88
GTF2A1-201ENST00000298173 A0A1B0GVG6 124 aa20.52■□□□□ 0.88
GTF2A1-201ENST00000298173 SIGLEC5O15389 551 aa20.52■□□□□ 0.88
GTF2A1-201ENST00000298173 BTG1P62324 171 aa20.52■□□□□ 0.88
GTF2A1-201ENST00000298173 GRK1Q15835 563 aa20.52■□□□□ 0.88
GTF2A1-201ENST00000298173 OR51S1Q8NGJ8 323 aa20.52■□□□□ 0.88
GTF2A1-201ENST00000298173 C14orf79Q96F83 325 aa20.52■□□□□ 0.88
GTF2A1-201ENST00000298173 PSMG3-AS1Q96PY0 264 aa20.52■□□□□ 0.88
GTF2A1-201ENST00000298173 FAM234AQ9H0X4 552 aa20.52■□□□□ 0.88
GTF2A1-201ENST00000298173 MMP28Q9H239 520 aa20.52■□□□□ 0.88
GTF2A1-201ENST00000298173 COPZ2Q9P299 210 aa20.52■□□□□ 0.88
GTF2A1-201ENST00000298173 A0A1B0GW55 424 aa20.51■□□□□ 0.87
GTF2A1-201ENST00000298173 MGST3O14880 152 aa20.51■□□□□ 0.87
GTF2A1-201ENST00000298173 TCRBP04435 133 aa20.51■□□□□ 0.87
GTF2A1-201ENST00000298173 DUX4L2P0CJ85 424 aa20.51■□□□□ 0.87
GTF2A1-201ENST00000298173 DUX4L3P0CJ86 424 aa20.51■□□□□ 0.87
GTF2A1-201ENST00000298173 DUX4L4P0CJ87 422 aa20.51■□□□□ 0.87
GTF2A1-201ENST00000298173 DUX4L5P0CJ88 424 aa20.51■□□□□ 0.87
GTF2A1-201ENST00000298173 DUX4L6P0CJ89 424 aa20.51■□□□□ 0.87
GTF2A1-201ENST00000298173 DUX4L7P0CJ90 424 aa20.51■□□□□ 0.87
GTF2A1-201ENST00000298173 RCC1P18754 421 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms