RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 SULT1A1P50225 295 aa20.95■□□□□ 0.94
SPTSSA-201ENST00000298130 DPPA2Q7Z7J5 298 aa20.95■□□□□ 0.94
SPTSSA-201ENST00000298130 CCDC71LQ8N9Z2 235 aa20.95■□□□□ 0.94
SPTSSA-201ENST00000298130 CCDC54Q8NEL0 328 aa20.95■□□□□ 0.94
SPTSSA-201ENST00000298130 GLRX2Q9NS18 164 aa20.95■□□□□ 0.94
SPTSSA-201ENST00000298130 TRAV39A0A0B4J263 110 aa20.95■□□□□ 0.94
SPTSSA-201ENST00000298130 ACER2Q5QJU3 275 aa20.95■□□□□ 0.94
SPTSSA-201ENST00000298130 VASH2Q86V25 355 aa20.95■□□□□ 0.94
SPTSSA-201ENST00000298130 OR5C1Q8NGR4 320 aa20.95■□□□□ 0.94
SPTSSA-201ENST00000298130 UBALD1Q8TB05 177 aa20.95■□□□□ 0.94
SPTSSA-201ENST00000298130 SGCZQ96LD1 299 aa20.95■□□□□ 0.94
SPTSSA-201ENST00000298130 TMEM222Q9H0R3 208 aa20.95■□□□□ 0.94
SPTSSA-201ENST00000298130 TMED3Q9Y3Q3 217 aa20.95■□□□□ 0.94
SPTSSA-201ENST00000298130 KNTC1P50748 2209 aa20.94■□□□□ 0.94
SPTSSA-201ENST00000298130 TRDCB7Z8K6 153 aa20.94■□□□□ 0.94
SPTSSA-201ENST00000298130 ZNF806P0C7X5 589 aa20.94■□□□□ 0.94
SPTSSA-201ENST00000298130 PRDX4Q13162 271 aa20.94■□□□□ 0.94
SPTSSA-201ENST00000298130 ZNF565Q8N9K5 539 aa20.94■□□□□ 0.94
SPTSSA-201ENST00000298130 RNF122Q9H9V4 155 aa20.94■□□□□ 0.94
SPTSSA-201ENST00000298130 NOSIPQ9Y314 301 aaKnown RBP20.94■□□□□ 0.94
SPTSSA-201ENST00000298130 DOCK10Q96BY6 2186 aa20.94■□□□□ 0.94
SPTSSA-201ENST00000298130 PROB1E7EW31 1015 aa20.94■□□□□ 0.94
SPTSSA-201ENST00000298130 HS3ST1O14792 307 aa20.94■□□□□ 0.94
SPTSSA-201ENST00000298130 FABP9Q0Z7S8 132 aa20.94■□□□□ 0.94
SPTSSA-201ENST00000298130 KRTAP27-1Q3LI81 207 aa20.94■□□□□ 0.94
SPTSSA-201ENST00000298130 TMEM211Q6ICI0 200 aa20.94■□□□□ 0.94
SPTSSA-201ENST00000298130 NCOR1O75376 2440 aa20.94■□□□□ 0.94
SPTSSA-201ENST00000298130 IGHV3-64DA0A0J9YX35 117 aa20.93■□□□□ 0.94
SPTSSA-201ENST00000298130 ZNF727A8MUV8 499 aa20.93■□□□□ 0.94
SPTSSA-201ENST00000298130 SYNGR1O43759 233 aa20.93■□□□□ 0.94
SPTSSA-201ENST00000298130 P4HA3Q7Z4N8 544 aa20.93■□□□□ 0.94
SPTSSA-201ENST00000298130 MTCH1Q9NZJ7 389 aa20.93■□□□□ 0.94
SPTSSA-201ENST00000298130 LILRA1O75019 489 aa20.93■□□□□ 0.94
SPTSSA-201ENST00000298130 MRPL33O75394 65 aaKnown RBP20.93■□□□□ 0.94
SPTSSA-201ENST00000298130 NQO2P16083 231 aa20.93■□□□□ 0.94
SPTSSA-201ENST00000298130 ZFP36L1Q07352 338 aaKnown RBP20.93■□□□□ 0.94
SPTSSA-201ENST00000298130 ABLIM2Q6H8Q1 611 aa20.93■□□□□ 0.94
SPTSSA-201ENST00000298130 C20orf204Q6ZNR8 217 aa20.93■□□□□ 0.94
SPTSSA-201ENST00000298130 SELENOHQ8IZQ5 122 aaKnown RBP20.93■□□□□ 0.94
SPTSSA-201ENST00000298130 C17orf78Q8N4C9 275 aa20.93■□□□□ 0.94
SPTSSA-201ENST00000298130 LILRB1Q8NHL6 650 aaPredicted RBP20.93■□□□□ 0.94
SPTSSA-201ENST00000298130 IGKV1-6A0A0C4DH72 117 aa20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 K7N7A8 449 aa20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 DYNLT3P51808 116 aa20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 C3AR1Q16581 482 aa20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 TUSC5Q8IXB3 177 aa20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 KCNE4Q8WWG9 221 aa20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 SLC35B3Q9H1N7 401 aa20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 PRDM6Q9NQX0 595 aa20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 ZNF732B4DXR9 585 aa20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 RPL36A-HNRNPH2H7BZ11 118 aa20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 NTN3O00634 580 aaPredicted RBP20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 JMJD7P0C870 316 aa20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 ZNF154Q13106 437 aa20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 TIPARPQ7Z3E1 657 aaKnown RBP20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 TMEM252Q8N6L7 170 aa20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 TMEM105Q8N8V8 129 aa20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 RDH5Q92781 318 aa20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 ZNF552Q9H707 407 aaPredicted RBP20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 TCFL5Q9UL49 500 aa20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 DIDO1Q9BTC0 2240 aaKnown RBP20.92■□□□□ 0.94
SPTSSA-201ENST00000298130 SLC22A20A6NK97 555 aa20.91■□□□□ 0.94
SPTSSA-201ENST00000298130 MT-ND4LP03901 98 aa20.91■□□□□ 0.94
SPTSSA-201ENST00000298130 TK1P04183 234 aa20.91■□□□□ 0.94
SPTSSA-201ENST00000298130 ODF3L1Q8IXM7 274 aa20.91■□□□□ 0.94
SPTSSA-201ENST00000298130 C5orf52A6NGY3 159 aa20.91■□□□□ 0.94
SPTSSA-201ENST00000298130 FAM166BA8MTA8 275 aa20.91■□□□□ 0.94
SPTSSA-201ENST00000298130 RAB5AP20339 215 aa20.91■□□□□ 0.94
SPTSSA-201ENST00000298130 UCP3P55916 312 aa20.91■□□□□ 0.94
SPTSSA-201ENST00000298130 PCBD1P61457 104 aa20.91■□□□□ 0.94
SPTSSA-201ENST00000298130 TRIM61Q5EBN2 209 aa20.91■□□□□ 0.94
SPTSSA-201ENST00000298130 EGLN1Q9GZT9 426 aa20.91■□□□□ 0.94
SPTSSA-201ENST00000298130 IFT22Q9H7X7 185 aa20.91■□□□□ 0.94
SPTSSA-201ENST00000298130 IL36GQ9NZH8 169 aa20.91■□□□□ 0.94
SPTSSA-201ENST00000298130 LIPGQ9Y5X9 500 aa20.91■□□□□ 0.94
SPTSSA-201ENST00000298130 VAMP2P63027 116 aa20.91■□□□□ 0.94
SPTSSA-201ENST00000298130 OR51H1Q8NH63 302 aa20.91■□□□□ 0.94
SPTSSA-201ENST00000298130 CYB561P49447 251 aa20.9■□□□□ 0.94
SPTSSA-201ENST00000298130 UCP2P55851 309 aa20.9■□□□□ 0.94
SPTSSA-201ENST00000298130 SOHLH1Q5JUK2 328 aa20.9■□□□□ 0.94
SPTSSA-201ENST00000298130 PRR18Q8N4B5 295 aa20.9■□□□□ 0.94
SPTSSA-201ENST00000298130 C1QTNF5Q9BXJ0 243 aa20.9■□□□□ 0.94
SPTSSA-201ENST00000298130 Q9N2K0 584 aa20.9■□□□□ 0.94
SPTSSA-201ENST00000298130 MMP24Q9Y5R2 645 aa20.9■□□□□ 0.94
SPTSSA-201ENST00000298130 A0A0G2JRQ6 117 aa20.9■□□□□ 0.94
SPTSSA-201ENST00000298130 ARGFXA6NJG6 315 aa20.9■□□□□ 0.94
SPTSSA-201ENST00000298130 TXNL1O43396 289 aa20.9■□□□□ 0.94
SPTSSA-201ENST00000298130 CHST1O43916 411 aa20.9■□□□□ 0.94
SPTSSA-201ENST00000298130 FOLR2P14207 255 aa20.9■□□□□ 0.94
SPTSSA-201ENST00000298130 SUMF2Q8NBJ7 301 aa20.9■□□□□ 0.94
SPTSSA-201ENST00000298130 URGCP-MRPS24S4R325 110 aa20.9■□□□□ 0.94
SPTSSA-201ENST00000298130 IFNA4P05014 189 aa20.89■□□□□ 0.93
SPTSSA-201ENST00000298130 PLA2G5P39877 138 aa20.89■□□□□ 0.93
SPTSSA-201ENST00000298130 ZNF100Q8IYN0 542 aa20.89■□□□□ 0.93
SPTSSA-201ENST00000298130 HMGN3Q15651 99 aa20.89■□□□□ 0.93
SPTSSA-201ENST00000298130 MRPL21Q7Z2W9 205 aaKnown RBP20.89■□□□□ 0.93
SPTSSA-201ENST00000298130 IL1F10Q8WWZ1 152 aa20.89■□□□□ 0.93
SPTSSA-201ENST00000298130 C11orf1Q9H5F2 150 aa20.89■□□□□ 0.93
SPTSSA-201ENST00000298130 LRFN1Q9P244 771 aa20.89■□□□□ 0.93
SPTSSA-201ENST00000298130 LOC400499M0QZD8 3231 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms