RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 CXorf67Q86X51 503 aaPredicted RBP10.04□□□□□ -0.8
RHO-201ENST00000296271 GAPTQ8N292 157 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 FAM71E2Q8N5Q1 922 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 EIF4E3Q8N5X7 224 aaKnown RBP10.04□□□□□ -0.8
RHO-201ENST00000296271 CNEP1R1Q8N9A8 125 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 MARC2Q969Z3 335 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 PHYHIPLQ96FC7 376 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 C18orf12Q96KH6 178 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 PRRX2Q99811 253 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 MAGT1Q9H0U3 335 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 ESRP2Q9H6T0 727 aaKnown RBP10.04□□□□□ -0.8
RHO-201ENST00000296271 ZDHHC11Q9H8X9 412 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 RNF122Q9H9V4 155 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 NKX2-6A6NCS4 301 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 IFNA21P01568 189 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 M6PRP20645 277 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 FHITP49789 147 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 FOXF2Q12947 444 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 VWA1Q6PCB0 445 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 LIAT1Q6ZQX7 453 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 TBC1D26Q86UD7 250 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 Q8NFD4 153 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 TAF9BQ9HBM6 251 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 FAM86C1Q9NVL1 165 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 TUBD1Q9UJT1 453 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 KCNIP3Q9Y2W7 256 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 C1QL1O75973 258 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 ATF4P18848 351 aaPredicted RBP10.03□□□□□ -0.8
RHO-201ENST00000296271 GLP1RP43220 463 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 ALKBH2Q6NS38 261 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 MKXQ8IYA7 352 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 IL1F10Q8WWZ1 152 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 HIST1H2AAQ96QV6 131 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 RSRP1Q9BUV0 290 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 GP6Q9HCN6 339 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 ATPIF1Q9UII2 106 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 KALRNO60229 2985 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 ANKRD30BLA7E2S9 258 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 SIRPB1O00241 398 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 MPPED1O15442 326 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 TFAP2EQ6VUC0 442 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 P4HA3Q7Z4N8 544 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 PIP4P1Q86T03 277 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 OR5A2Q8NGI9 324 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 GALNT14Q96FL9 552 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 ASCL3Q9NQ33 180 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 TMEM100Q9NV29 134 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 OR1A1Q9P1Q5 309 aa10.03□□□□□ -0.8
RHO-201ENST00000296271 C3orf85A0A1B0GTC6 90 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 CDIPTO14735 213 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 COX5BP10606 129 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 ZNF14P17017 642 aaPredicted RBP10.02□□□□□ -0.81
RHO-201ENST00000296271 MPV17P39210 176 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 TMEM88Q6PEY1 159 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 MRPL30Q8TCC3 161 aaKnown RBP10.02□□□□□ -0.81
RHO-201ENST00000296271 SH3BGRL3Q9H299 93 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 RCC2Q9P258 522 aaKnown RBP10.02□□□□□ -0.81
RHO-201ENST00000296271 MUC6Q6W4X9 2439 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 A0A1B0GV50 99 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 CDRT15L2A8MXV6 281 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 C9JQL5 133 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 MED6O75586 246 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 ROS1P08922 2347 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 ZNF44P15621 663 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 CXorf66Q5JRM2 361 aaPredicted RBP10.02□□□□□ -0.81
RHO-201ENST00000296271 FBXW12Q6X9E4 464 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 ZNF826PQ6ZT77 177 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 DMBX1Q8NFW5 382 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 LILRB1Q8NHL6 650 aaPredicted RBP10.02□□□□□ -0.81
RHO-201ENST00000296271 PLPPR1Q8TBJ4 325 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 RNF141Q8WVD5 230 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 KIRREL1Q96J84 757 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 TECTBQ96PL2 329 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 LUZP4Q9P127 313 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 RCL1Q9Y2P8 373 aaKnown RBP10.02□□□□□ -0.81
RHO-201ENST00000296271 MEMO1Q9Y316 297 aa10.02□□□□□ -0.81
RHO-201ENST00000296271 H7C1Q1 480 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 DNASE2O00115 360 aaPredicted RBP10.01□□□□□ -0.81
RHO-201ENST00000296271 SMPD2O60906 423 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 GRPP07492 148 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 OMGP23515 440 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 KCNJ3P48549 501 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 POLR2GP62487 172 aaKnown RBP eCLIP10.01□□□□□ -0.81
RHO-201ENST00000296271 NAAAQ02083 359 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 ZNF273Q14593 569 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 STK11Q15831 433 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 DEFB109BQ30KR1 87 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 PCSK4Q6UW60 755 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 FAM58AQ8N1B3 248 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 C9orf106Q8NAJ2 232 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 SLC25A40Q8TBP6 338 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 IP6K3Q96PC2 410 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 TLNRD1Q9H1K6 362 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 OR51I2Q9H344 312 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 DLL3Q9NYJ7 618 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 DNAJB11Q9UBS4 358 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 LPAR3Q9UBY5 353 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 TMEM218A2RU14 115 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 PROB1E7EW31 1015 aa10.01□□□□□ -0.81
RHO-201ENST00000296271 WNT9BO14905 357 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms