RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 ERVS71-1P61550 626 aa12.33□□□□□ -0.44
FUBP1-201ENST00000294623 MEF2BQ02080 365 aaPredicted RBP12.33□□□□□ -0.44
FUBP1-201ENST00000294623 OR5I1Q13606 314 aa12.33□□□□□ -0.44
FUBP1-201ENST00000294623 ENDOGQ14249 297 aaKnown RBP12.33□□□□□ -0.44
FUBP1-201ENST00000294623 NMSQ5H8A3 153 aa12.33□□□□□ -0.44
FUBP1-201ENST00000294623 C9orf50Q5SZB4 431 aa12.33□□□□□ -0.44
FUBP1-201ENST00000294623 ODF3L1Q8IXM7 274 aa12.33□□□□□ -0.44
FUBP1-201ENST00000294623 SHISA5Q8N114 240 aa12.33□□□□□ -0.44
FUBP1-201ENST00000294623 MRPL13Q9BYD1 178 aaKnown RBP12.33□□□□□ -0.44
FUBP1-201ENST00000294623 DNAJC4Q9NNZ3 241 aa12.33□□□□□ -0.44
FUBP1-201ENST00000294623 RPRMQ9NS64 109 aa12.33□□□□□ -0.44
FUBP1-201ENST00000294623 PCNTO95613 3336 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 A6NNC1 897 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 FCGR2AP12318 317 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 HLA-DOBP13765 273 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 AADACP22760 399 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 OMGP23515 440 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 PSMB3P49720 205 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 RPL15P61313 204 aaKnown RBP12.32□□□□□ -0.44
FUBP1-201ENST00000294623 RUNX1Q01196 453 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 LHX8Q68G74 356 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 TMEM211Q6ICI0 200 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 ALKBH2Q6NS38 261 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 MRGPRDQ8TDS7 321 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 WDYHV1Q96HA8 205 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 SLC35E1Q96K37 410 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 SIGLEC12Q96PQ1 595 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 TP53RKQ96S44 253 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 GABRG3Q99928 467 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 VAMP8Q9BV40 100 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 HRASLS2Q9NWW9 162 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 B3GALT1Q9Y5Z6 326 aa12.32□□□□□ -0.44
FUBP1-201ENST00000294623 IGKV1D-43A0A0B4J1Z2 117 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 H0YIG0 161 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 DDAH2O95865 285 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 MDKP21741 143 aaPredicted RBP12.31□□□□□ -0.44
FUBP1-201ENST00000294623 GJA4P35212 333 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 ASCL1P50553 236 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 FXYD4P59646 89 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 POU3F1Q03052 451 aaPredicted RBP12.31□□□□□ -0.44
FUBP1-201ENST00000294623 TLE3Q04726 772 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 ASCL4Q6XD76 172 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 C1QL2Q7Z5L3 287 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 PGAM5Q96HS1 289 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 LRRC3BQ96PB8 259 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 SERINC1Q9NRX5 453 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 HCFC2Q9Y5Z7 792 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 PXMP4Q9Y6I8 212 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 KIR2DS5A0A0G2JLQ3 304 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 A0A0G2JNG1 304 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 NKX6-3A6NJ46 265 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 KIR2DS3K7RE56 304 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 TCF21O43680 179 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 ZNF737O75373 536 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 ONECUT2O95948 504 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 IGHG1P01857 330 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 WNT2P09544 360 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 RPS20P60866 119 aaKnown RBP12.31□□□□□ -0.44
FUBP1-201ENST00000294623 KIR2DS5Q14953 304 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 AARDQ4LEZ3 155 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 HLA-DQA1Q5Y7H0 255 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 MEX3BQ6ZN04 569 aaKnown RBP12.31□□□□□ -0.44
FUBP1-201ENST00000294623 DEFB128Q7Z7B8 93 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 C11orf42Q8N5U0 333 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 OR14C36Q8NHC7 312 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 CMTM2Q8TAZ6 248 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 GMPPAQ96IJ6 420 aaPredicted RBP12.31□□□□□ -0.44
FUBP1-201ENST00000294623 SPOCK3Q9BQ16 436 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 FBRSQ9HAH7 460 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 PNRC2Q9NPJ4 139 aaKnown RBP12.31□□□□□ -0.44
FUBP1-201ENST00000294623 IL36GQ9NZH8 169 aa12.31□□□□□ -0.44
FUBP1-201ENST00000294623 TRBV11-1A0A0K0K1C0 115 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 ANKUB1A6NFN9 424 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 CST7O76096 145 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 OPN1LWP04000 364 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 IGKV3-11P04433 115 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 CTSEP14091 401 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 CHRNB4P30926 498 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 HBG1P69891 147 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 HBG2P69892 147 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 FOXL1Q12952 345 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 SLC25A47Q6Q0C1 308 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 FAM57BQ71RH2 274 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 OR5D13Q8NGL4 314 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 THOC3Q96J01 351 aaKnown RBP12.3□□□□□ -0.44
FUBP1-201ENST00000294623 KLHDC3Q9BQ90 382 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 TMEM9BQ9NQ34 198 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 SERGEFQ9UGK8 458 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 RNF115Q9Y4L5 304 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 RFNGQ9Y644 331 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 PPYP01298 95 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 CLRN1P58418 232 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 PPP1CBP62140 327 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 TPTE2P1Q5T6R2 138 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 TSPO2Q5TGU0 170 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 TOMM20LQ6UXN7 152 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 TMEM144Q7Z5S9 345 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 STARD5Q9NSY2 213 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 OBP2AQ9NY56 170 aa12.3□□□□□ -0.44
FUBP1-201ENST00000294623 TRAPPC1Q9Y5R8 145 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms