RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 RNF224P0DH78 156 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 HLA-DRB3P79483 266 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 HIST3H3Q16695 136 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 SPSB3Q6PJ21 355 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 AAED1Q7RTV5 226 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 C1orf87Q8N0U7 546 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 OR4D5Q8NGN0 318 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 NABP1Q96AH0 204 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 MALSU1Q96EH3 234 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 ANGPTL4Q9BY76 406 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 A0A087WZY1 265 aa12.71□□□□□ -0.38
CCNF-201ENST00000293968 CEBPZOSA8MTT3 80 aa12.71□□□□□ -0.38
CCNF-201ENST00000293968 SERPINE2P07093 398 aa12.71□□□□□ -0.38
CCNF-201ENST00000293968 SOD3P08294 240 aa12.71□□□□□ -0.38
CCNF-201ENST00000293968 CCL2P13500 99 aa12.71□□□□□ -0.38
CCNF-201ENST00000293968 SRPXP78539 464 aa12.71□□□□□ -0.38
CCNF-201ENST00000293968 ICAM4Q14773 271 aa12.71□□□□□ -0.38
CCNF-201ENST00000293968 KHDC3LQ587J8 217 aa12.71□□□□□ -0.38
CCNF-201ENST00000293968 WDR5BQ86VZ2 330 aa12.71□□□□□ -0.38
CCNF-201ENST00000293968 UBALD1Q8TB05 177 aa12.71□□□□□ -0.38
CCNF-201ENST00000293968 RSG1Q9BU20 258 aa12.71□□□□□ -0.38
CCNF-201ENST00000293968 IFITM10A6NMD0 228 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 HMGB3O15347 200 aaKnown RBP12.7□□□□□ -0.38
CCNF-201ENST00000293968 TRGC1P0CF51 173 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 MMP9P14780 707 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 RAB35Q15286 201 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 SLC25A53Q5H9E4 307 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 ZNF574Q6ZN55 896 aaPredicted RBP12.7□□□□□ -0.38
CCNF-201ENST00000293968 ZNF818PQ6ZRF7 136 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 CALHM1Q8IU99 346 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 OR51B6Q9H340 312 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 GAB2Q9UQC2 676 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 A0A0J9YW62 118 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 SMCO3A2RU48 225 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 ZNF705GA8MUZ8 300 aaPredicted RBP12.7□□□□□ -0.38
CCNF-201ENST00000293968 PHOX2AO14813 284 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 GUSBP11Q6P575 273 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 INTS12Q96CB8 462 aaKnown RBP12.7□□□□□ -0.38
CCNF-201ENST00000293968 BCAT2O15382 392 aaPredicted RBP12.7□□□□□ -0.38
CCNF-201ENST00000293968 CDS2O95674 445 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 CTSSP25774 331 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 ADIRFQ15847 76 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 CEACAM16Q2WEN9 425 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 ZNF787Q6DD87 383 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 OPA3Q9H6K4 179 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 ZNF665Q9H7R5 613 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 LYRM2Q9NU23 88 aaPredicted RBP12.7□□□□□ -0.38
CCNF-201ENST00000293968 UFSP2Q9NUQ7 469 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 PTRH2Q9Y3E5 179 aaKnown RBP12.7□□□□□ -0.38
CCNF-201ENST00000293968 TSTD3H0UI37 97 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 HS3ST1O14792 307 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 LTBRP36941 435 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 UCP2P55851 309 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 ZNF468Q5VIY5 522 aaPredicted RBP12.7□□□□□ -0.38
CCNF-201ENST00000293968 SELENOHQ8IZQ5 122 aaKnown RBP12.7□□□□□ -0.38
CCNF-201ENST00000293968 FRZBQ92765 325 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 CABLES2Q9BTV7 478 aa12.7□□□□□ -0.38
CCNF-201ENST00000293968 FER1L5A0AVI2 2057 aa12.69□□□□□ -0.38
CCNF-201ENST00000293968 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.69□□□□□ -0.38
CCNF-201ENST00000293968 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.69□□□□□ -0.38
CCNF-201ENST00000293968 BTBD17A6NE02 478 aa12.69□□□□□ -0.38
CCNF-201ENST00000293968 HBE1P02100 147 aa12.69□□□□□ -0.38
CCNF-201ENST00000293968 PGA5P0DJD9 388 aa12.69□□□□□ -0.38
CCNF-201ENST00000293968 GPX4P36969 197 aaPredicted RBP12.69□□□□□ -0.38
CCNF-201ENST00000293968 FUT6P51993 359 aa12.69□□□□□ -0.38
CCNF-201ENST00000293968 PLK3Q9H4B4 646 aa12.69□□□□□ -0.38
CCNF-201ENST00000293968 VAMP5O95183 116 aa12.69□□□□□ -0.38
CCNF-201ENST00000293968 S100GP29377 79 aa12.69□□□□□ -0.38
CCNF-201ENST00000293968 RBM11P57052 281 aaKnown RBP12.69□□□□□ -0.38
CCNF-201ENST00000293968 LILRB2Q8N423 598 aa12.69□□□□□ -0.38
CCNF-201ENST00000293968 RDH5Q92781 318 aa12.69□□□□□ -0.38
CCNF-201ENST00000293968 CHCHD2Q9Y6H1 151 aaPredicted RBP12.69□□□□□ -0.38
CCNF-201ENST00000293968 A0A1W2PR80 420 aa12.69□□□□□ -0.38
CCNF-201ENST00000293968 C3orf80F5H4A9 247 aa12.69□□□□□ -0.38
CCNF-201ENST00000293968 CXCL13O43927 109 aa12.69□□□□□ -0.38
CCNF-201ENST00000293968 GPM6AP51674 278 aa12.69□□□□□ -0.38
CCNF-201ENST00000293968 FAM27BQ5VT28 67 aa12.69□□□□□ -0.38
CCNF-201ENST00000293968 SRXN1Q9BYN0 137 aa12.69□□□□□ -0.38
CCNF-201ENST00000293968 OR5H1A6NKK0 313 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 BCL3P20749 454 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 C10orf128Q5T292 105 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 C1QL4Q86Z23 238 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 LRTM2Q8N967 370 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 CCDC54Q8NEL0 328 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 TMEM54Q969K7 222 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 SGCZQ96LD1 299 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 FSCN3Q9NQT6 498 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 IL36RNQ9UBH0 155 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 KCNS2Q9ULS6 477 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 A0A096LPE4 126 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 A0A1W2PPZ6 126 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 METTL15P1P0C7V9 234 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 CARD18P57730 90 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 TESK1Q15569 626 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 KMT5CQ86Y97 462 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 C10orf35Q96D05 121 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 PACRGQ96M98 296 aaPredicted RBP12.68□□□□□ -0.38
CCNF-201ENST00000293968 DECR2Q9NUI1 292 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 IGKV1D-13A0A0B4J2D9 117 aa12.68□□□□□ -0.38
CCNF-201ENST00000293968 TMEM50AO95807 157 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms