RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 AIFM2Q9BRQ8 373 aa12.92□□□□□ -0.34
CCDC116-201ENST00000292779 ZNF552Q9H707 407 aaPredicted RBP12.92□□□□□ -0.34
CCDC116-201ENST00000292779 Q9N2K0 584 aa12.92□□□□□ -0.34
CCDC116-201ENST00000292779 DLL3Q9NYJ7 618 aa12.92□□□□□ -0.34
CCDC116-201ENST00000292779 ESPL1Q14674 2120 aa12.92□□□□□ -0.34
CCDC116-201ENST00000292779 ZNF724A8MTY0 619 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 SS18L1O75177 396 aaPredicted RBP12.91□□□□□ -0.34
CCDC116-201ENST00000292779 TSPAN9O75954 239 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 NAPSAO96009 420 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 SCTP09683 121 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 F2RL1P55085 397 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 TGIF1Q15583 401 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 Q6ZS49 121 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 NUFIP2Q7Z417 695 aaKnown RBP12.91□□□□□ -0.34
CCDC116-201ENST00000292779 DPPA2Q7Z7J5 298 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 SPAG16Q8N0X2 631 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 POM121L2Q96KW2 1035 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 ARV1Q9H2C2 271 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 TMED3Q9Y3Q3 217 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 MGAQ8IWI9 3026 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 ST8SIA3O43173 380 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 GLAP06280 429 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 SFTA3P0C7M3 94 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 OR8U9P0C7N5 309 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 P2RY1P47900 373 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 SRSF6Q13247 344 aaKnown RBP12.91□□□□□ -0.34
CCDC116-201ENST00000292779 IL13RA2Q14627 380 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 SWI5Q1ZZU3 235 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 GPR157Q5UAW9 335 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 DMBX1Q8NFW5 382 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 OR8U1Q8NH10 309 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 ZFP57Q9NU63 452 aa12.91□□□□□ -0.34
CCDC116-201ENST00000292779 RCL1Q9Y2P8 373 aaKnown RBP12.91□□□□□ -0.34
CCDC116-201ENST00000292779 PRRC2CQ9Y520 2896 aaKnown RBP12.91□□□□□ -0.34
CCDC116-201ENST00000292779 TRAPPC2LH3BP13 241 aa12.9□□□□□ -0.34
CCDC116-201ENST00000292779 SYNGR1O43759 233 aa12.9□□□□□ -0.34
CCDC116-201ENST00000292779 CD5P06127 495 aa12.9□□□□□ -0.34
CCDC116-201ENST00000292779 H2AFB1P0C5Y9 115 aa12.9□□□□□ -0.34
CCDC116-201ENST00000292779 SPINK2P20155 84 aa12.9□□□□□ -0.34
CCDC116-201ENST00000292779 CD80P33681 288 aa12.9□□□□□ -0.34
CCDC116-201ENST00000292779 ARR3P36575 388 aa12.9□□□□□ -0.34
CCDC116-201ENST00000292779 MEOX1P50221 254 aa12.9□□□□□ -0.34
CCDC116-201ENST00000292779 NHLH2Q02577 135 aa12.9□□□□□ -0.34
CCDC116-201ENST00000292779 TSC22D1Q15714 1073 aa12.9□□□□□ -0.34
CCDC116-201ENST00000292779 DHRS7BQ6IAN0 325 aaPredicted RBP12.9□□□□□ -0.34
CCDC116-201ENST00000292779 TBC1D26Q86UD7 250 aa12.9□□□□□ -0.34
CCDC116-201ENST00000292779 OR4D5Q8NGN0 318 aa12.9□□□□□ -0.34
CCDC116-201ENST00000292779 SECTM1Q8WVN6 248 aa12.9□□□□□ -0.34
CCDC116-201ENST00000292779 USB1Q9BQ65 265 aaKnown RBP12.9□□□□□ -0.34
CCDC116-201ENST00000292779 TMEM222Q9H0R3 208 aa12.9□□□□□ -0.34
CCDC116-201ENST00000292779 FAM212BQ9NTI7 297 aaPredicted RBP12.9□□□□□ -0.34
CCDC116-201ENST00000292779 BORCS7-ASMTA0A0B4J1R7 106 aa12.9□□□□□ -0.35
CCDC116-201ENST00000292779 NKX2-6A6NCS4 301 aa12.9□□□□□ -0.35
CCDC116-201ENST00000292779 C9JQL5 133 aa12.9□□□□□ -0.35
CCDC116-201ENST00000292779 TK1P04183 234 aa12.9□□□□□ -0.35
CCDC116-201ENST00000292779 SP1P08047 785 aa12.9□□□□□ -0.35
CCDC116-201ENST00000292779 KCNJ3P48549 501 aa12.9□□□□□ -0.35
CCDC116-201ENST00000292779 HERPUD1Q15011 391 aa12.9□□□□□ -0.35
CCDC116-201ENST00000292779 SPIN3Q5JUX0 258 aa12.9□□□□□ -0.35
CCDC116-201ENST00000292779 MKXQ8IYA7 352 aa12.9□□□□□ -0.35
CCDC116-201ENST00000292779 FAM185AQ8N0U4 392 aa12.9□□□□□ -0.35
CCDC116-201ENST00000292779 LYPD6BQ8NI32 183 aa12.9□□□□□ -0.35
CCDC116-201ENST00000292779 NEK7Q8TDX7 302 aa12.9□□□□□ -0.35
CCDC116-201ENST00000292779 RNF122Q9H9V4 155 aa12.9□□□□□ -0.35
CCDC116-201ENST00000292779 LHX6Q9UPM6 363 aa12.9□□□□□ -0.35
CCDC116-201ENST00000292779 POMT1Q9Y6A1 747 aa12.9□□□□□ -0.35
CCDC116-201ENST00000292779 CD300LBA8K4G0 201 aa12.89□□□□□ -0.35
CCDC116-201ENST00000292779 TRDCB7Z8K6 153 aa12.89□□□□□ -0.35
CCDC116-201ENST00000292779 DLL1O00548 723 aa12.89□□□□□ -0.35
CCDC116-201ENST00000292779 LILRA1O75019 489 aa12.89□□□□□ -0.35
CCDC116-201ENST00000292779 PLP2Q04941 152 aa12.89□□□□□ -0.35
CCDC116-201ENST00000292779 SRSF7Q16629 238 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCDC116-201ENST00000292779 MPV17LQ2QL34 196 aa12.89□□□□□ -0.35
CCDC116-201ENST00000292779 HFEQ30201 348 aa12.89□□□□□ -0.35
CCDC116-201ENST00000292779 ATP1A1-AS1Q5TC04 95 aa12.89□□□□□ -0.35
CCDC116-201ENST00000292779 ZNF818PQ6ZRF7 136 aa12.89□□□□□ -0.35
CCDC116-201ENST00000292779 MCEMP1Q8IX19 187 aa12.89□□□□□ -0.35
CCDC116-201ENST00000292779 OR5A2Q8NGI9 324 aa12.89□□□□□ -0.35
CCDC116-201ENST00000292779 HIST1H2AAQ96QV6 131 aa12.89□□□□□ -0.35
CCDC116-201ENST00000292779 GPHA2Q96T91 129 aa12.89□□□□□ -0.35
CCDC116-201ENST00000292779 GINS3Q9BRX5 216 aa12.89□□□□□ -0.35
CCDC116-201ENST00000292779 NDRG3Q9UGV2 375 aa12.89□□□□□ -0.35
CCDC116-201ENST00000292779 PRSS50Q9UI38 385 aa12.89□□□□□ -0.35
CCDC116-201ENST00000292779 UBE2J1Q9Y385 318 aaPredicted RBP12.89□□□□□ -0.35
CCDC116-201ENST00000292779 LIPGQ9Y5X9 500 aa12.89□□□□□ -0.35
CCDC116-201ENST00000292779 IGKV1D-13A0A0B4J2D9 117 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 NME2P1O60361 137 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 SEC11BP0C7V7 166 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 IGKV1-13P0DP09 117 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 PRKACAP17612 351 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 RNPS1Q15287 305 aaKnown RBP12.88□□□□□ -0.35
CCDC116-201ENST00000292779 GAPTQ8N292 157 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 IL22RA1Q8N6P7 574 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 ZNF565Q8N9K5 539 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 ZNF488Q96MN9 340 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 OR51B6Q9H340 312 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 C12orf49Q9H741 205 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 BOD1L1Q8NFC6 3051 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 SLC22A20A6NK97 555 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 FAM157AC9JC47 383 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms