RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 DHDHQ9UQ10 334 aa10.17□□□□□ -0.78
CD44-203ENST00000278386 MEIKINA0A087WXM9 373 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 KBTBD11-OT1A0A1B0GTJ5 212 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 PSMB11A5LHX3 300 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 OOSP1A8MZH6 123 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 IGHV3-7P01780 117 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 SNRNP70P08621 437 aaKnown RBP10.16□□□□□ -0.78
CD44-203ENST00000278386 CCDC159P0C7I6 412 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 DBTP11182 482 aaKnown RBP10.16□□□□□ -0.78
CD44-203ENST00000278386 GNG10P50151 68 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 ALDH3A2P51648 485 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 ZP1P60852 638 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 GALEQ14376 348 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 CDK5R1Q15078 307 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 KISS1Q15726 138 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 C17orf58Q2M2W7 97 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 SATL1Q86VE3 508 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 SERPINA12Q8IW75 414 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 WFDC9Q8NEX5 89 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 OR5D14Q8NGL3 314 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 OR56B4Q8NH76 319 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 LEAP2Q969E1 77 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 PCDHB16Q9NRJ7 776 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 KIF25Q9UIL4 384 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 EXOGQ9Y2C4 368 aaKnown RBP10.16□□□□□ -0.78
CD44-203ENST00000278386 ZNF281Q9Y2X9 895 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 GMPPBQ9Y5P6 360 aa10.16□□□□□ -0.78
CD44-203ENST00000278386 A0A087X0M5 115 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 A0A1B0GX30 115 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 TMEM212A6NML5 194 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 MAGEB3O15480 346 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 AMY1AP04745 511 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 AMY2AP04746 511 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 FAM106CPP0CH98 169 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 TMEM11P17152 192 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 SLC25A30Q5SVS4 291 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 UTF1Q5T230 341 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 SYS1Q8N2H4 156 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 OSR2Q8N2R0 312 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 OR51D1Q8NGF3 324 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 OR51T1Q8NGJ9 327 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 OR13A1Q8NGR1 328 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 OR5AK2Q8NH90 309 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 MRGPRDQ8TDS7 321 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 TNFAIP8L1Q8WVP5 186 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 DPF1Q92782 380 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 PDCD1LG2Q9BQ51 273 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 ISG20L2Q9H9L3 353 aaKnown RBP10.15□□□□□ -0.78
CD44-203ENST00000278386 IDI2-AS1Q9NZ38 188 aa10.15□□□□□ -0.78
CD44-203ENST00000278386 LY6LH3BQJ8 138 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 J3QR06 171 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 K7EIL1 84 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 GABRPO00591 440 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 ZFPL1O95159 310 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 DUS4LO95620 317 aaKnown RBP10.14□□□□□ -0.79
CD44-203ENST00000278386 IL1AP01583 271 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 RPSAP08865 295 aaKnown RBP10.14□□□□□ -0.79
CD44-203ENST00000278386 RAB3AP20336 220 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 C21orf33P30042 268 aaPredicted RBP10.14□□□□□ -0.79
CD44-203ENST00000278386 GBX2P52951 348 aaPredicted RBP10.14□□□□□ -0.79
CD44-203ENST00000278386 MRPL28Q13084 256 aaKnown RBP10.14□□□□□ -0.79
CD44-203ENST00000278386 IL13RA2Q14627 380 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 RSU1Q15404 277 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 PIGYQ3MUY2 71 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 CBR4Q8N4T8 237 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 PARP16Q8N5Y8 322 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 DRAM1Q8N682 238 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 ZNF565Q8N9K5 539 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 OR10K1Q8NGX5 313 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 OR10X1Q8NGY0 326 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 CNIH3Q8TBE1 160 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 BARHL1Q9BZE3 327 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 AMBNQ9NP70 447 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 INPP5EQ9NRR6 644 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 TAS2R4Q9NYW5 299 aa10.14□□□□□ -0.79
CD44-203ENST00000278386 TRAV24A0A0B4J272 114 aa10.13□□□□□ -0.79
CD44-203ENST00000278386 A0A1W2PPI3 338 aa10.13□□□□□ -0.79
CD44-203ENST00000278386 NUDT19A8MXV4 375 aa10.13□□□□□ -0.79
CD44-203ENST00000278386 FADS2O95864 444 aaKnown RBP10.13□□□□□ -0.79
CD44-203ENST00000278386 HOXD3P31249 432 aaPredicted RBP10.13□□□□□ -0.79
CD44-203ENST00000278386 SSTR5P35346 364 aa10.13□□□□□ -0.79
CD44-203ENST00000278386 SOX2P48431 317 aa10.13□□□□□ -0.79
CD44-203ENST00000278386 RAB7AP51149 207 aa10.13□□□□□ -0.79
CD44-203ENST00000278386 MADCAM1Q13477 382 aa10.13□□□□□ -0.79
CD44-203ENST00000278386 DEFB121Q5J5C9 76 aa10.13□□□□□ -0.79
CD44-203ENST00000278386 ZNF329Q86UD4 541 aa10.13□□□□□ -0.79
CD44-203ENST00000278386 PXT1Q8NFP0 134 aa10.13□□□□□ -0.79
CD44-203ENST00000278386 OR51A2Q8NGJ7 313 aa10.13□□□□□ -0.79
CD44-203ENST00000278386 RFESDQ8TAC1 157 aa10.13□□□□□ -0.79
CD44-203ENST00000278386 PLPPR1Q8TBJ4 325 aa10.13□□□□□ -0.79
CD44-203ENST00000278386 Q96MT0 163 aa10.13□□□□□ -0.79
CD44-203ENST00000278386 NOL4LQ96MY1 436 aaPredicted RBP10.13□□□□□ -0.79
CD44-203ENST00000278386 GPR61Q9BZJ8 451 aa10.13□□□□□ -0.79
CD44-203ENST00000278386 ERVK13-1Q9NX77 482 aa10.13□□□□□ -0.79
CD44-203ENST00000278386 PSG11Q9UQ72 335 aa10.13□□□□□ -0.79
CD44-203ENST00000278386 WI2-2373I1.2A0A1W2PRP0 233 aa10.12□□□□□ -0.79
CD44-203ENST00000278386 SERPINE3A8MV23 424 aa10.12□□□□□ -0.79
CD44-203ENST00000278386 E9PI62 339 aa10.12□□□□□ -0.79
CD44-203ENST00000278386 E9PQ18 207 aa10.12□□□□□ -0.79
CD44-203ENST00000278386 MPZL2O60487 215 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms