RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 CRYBA1P05813 215 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 RBM11P57052 281 aaKnown RBP11.12□□□□□ -0.63
C9orf3-201ENST00000277198 HERV-K104P61576 105 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 RNF212Q495C1 297 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 LYZL2Q7Z4W2 148 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 FDCSPQ8NFU4 85 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 ERGIC1Q969X5 290 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 TMEM45BQ96B21 275 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 C1QTNF5Q9BXJ0 243 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 A0A1B0GW64 132 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 COLCA2A8K830 154 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 G3V3Y1 287 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 SCGB1D2O95969 90 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 F12P00748 615 aaPredicted RBP11.12□□□□□ -0.63
C9orf3-201ENST00000277198 OR8U9P0C7N5 309 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 B4GALT1P15291 398 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 NTF4P34130 210 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 CLDN15P56746 228 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 GNMTQ14749 295 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 PIGYQ3MUY2 71 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 SHEQ5VZ18 495 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 FBXW12Q6X9E4 464 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 COLCA1Q6ZS62 124 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 SAXO1Q8IYX7 474 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 LFNGQ8NES3 379 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 OR8U1Q8NH10 309 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 RXFP4Q8TDU9 374 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 CPNE4Q96A23 557 aaPredicted RBP11.12□□□□□ -0.63
C9orf3-201ENST00000277198 P4HTMQ9NXG6 502 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 PIGBOS1A0A0B4J2F0 54 aa11.11□□□□□ -0.63
C9orf3-201ENST00000277198 DUXBA0A1W2PPF3 345 aa11.11□□□□□ -0.63
C9orf3-201ENST00000277198 CYTIPO60759 359 aa11.11□□□□□ -0.63
C9orf3-201ENST00000277198 LMO1P25800 156 aa11.11□□□□□ -0.63
C9orf3-201ENST00000277198 RND3P61587 244 aa11.11□□□□□ -0.63
C9orf3-201ENST00000277198 ZNF92Q03936 586 aa11.11□□□□□ -0.63
C9orf3-201ENST00000277198 SSPNQ14714 243 aa11.11□□□□□ -0.63
C9orf3-201ENST00000277198 CEACAM16Q2WEN9 425 aa11.11□□□□□ -0.63
C9orf3-201ENST00000277198 SP6Q3SY56 376 aa11.11□□□□□ -0.63
C9orf3-201ENST00000277198 ZNF468Q5VIY5 522 aaPredicted RBP11.11□□□□□ -0.63
C9orf3-201ENST00000277198 PLCXD3Q63HM9 321 aa11.11□□□□□ -0.63
C9orf3-201ENST00000277198 YRDCQ86U90 279 aaKnown RBP11.11□□□□□ -0.63
C9orf3-201ENST00000277198 OR4D5Q8NGN0 318 aa11.11□□□□□ -0.63
C9orf3-201ENST00000277198 OR10D3Q8NH80 312 aa11.11□□□□□ -0.63
C9orf3-201ENST00000277198 AKR7LQ8NHP1 331 aa11.11□□□□□ -0.63
C9orf3-201ENST00000277198 MARS2Q96GW9 593 aaKnown RBP11.11□□□□□ -0.63
C9orf3-201ENST00000277198 SPIN2AQ99865 258 aa11.11□□□□□ -0.63
C9orf3-201ENST00000277198 SPIN2BQ9BPZ2 258 aa11.11□□□□□ -0.63
C9orf3-201ENST00000277198 GPR35Q9HC97 309 aa11.11□□□□□ -0.63
C9orf3-201ENST00000277198 PARPBPQ9NWS1 579 aa11.11□□□□□ -0.63
C9orf3-201ENST00000277198 ZNF98A6NK75 572 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 MKRN2OSH3BPM6 223 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 MPPED1O15442 326 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 CXCL13O43927 109 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 PPYP01298 95 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 MMP7P09237 267 aaPredicted RBP11.1□□□□□ -0.63
C9orf3-201ENST00000277198 NFYBP25208 207 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 FXYD4P59646 89 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 ZNF266Q14584 549 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 DCAF10Q5QP82 559 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 TMEM56Q96MV1 263 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 ALKBH3Q96Q83 286 aaPredicted RBP11.1□□□□□ -0.63
C9orf3-201ENST00000277198 PBDC1Q9BVG4 233 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 SMIM3Q9BZL3 60 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 TMEM56-RWDD3S4R434 201 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 C9JQL5 133 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 RPL36A-HNRNPH2H7BZ11 118 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 AGPAT2O15120 278 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 PHF1O43189 567 aaPredicted RBP11.1□□□□□ -0.63
C9orf3-201ENST00000277198 RAB5BP61020 215 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 GUK1Q16774 197 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 MIDNQ504T8 468 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 PHLDA2Q53GA4 152 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 OR8G5Q8NG78 346 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 AKR1E2Q96JD6 320 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 SCRT1Q9BWW7 348 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 LINC00470Q9BZP3 86 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 TMEM222Q9H0R3 208 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 ZNF442Q9H7R0 627 aa11.1□□□□□ -0.63
C9orf3-201ENST00000277198 IGKV3D-15A0A087WSY6 115 aa11.09□□□□□ -0.63
C9orf3-201ENST00000277198 C3orf85A0A1B0GTC6 90 aa11.09□□□□□ -0.63
C9orf3-201ENST00000277198 LRRC3CA6NJW4 275 aa11.09□□□□□ -0.63
C9orf3-201ENST00000277198 UMAD1C9J7I0 102 aa11.09□□□□□ -0.63
C9orf3-201ENST00000277198 DIRAS3O95661 229 aa11.09□□□□□ -0.63
C9orf3-201ENST00000277198 CTXN2P0C2S0 81 aa11.09□□□□□ -0.63
C9orf3-201ENST00000277198 AADACP22760 399 aa11.09□□□□□ -0.63
C9orf3-201ENST00000277198 CAMLGP49069 296 aa11.09□□□□□ -0.63
C9orf3-201ENST00000277198 S100A12P80511 92 aa11.09□□□□□ -0.63
C9orf3-201ENST00000277198 Q0VFX4 171 aa11.09□□□□□ -0.63
C9orf3-201ENST00000277198 FOXO1Q12778 655 aa11.09□□□□□ -0.63
C9orf3-201ENST00000277198 ZNF611Q8N823 705 aa11.09□□□□□ -0.63
C9orf3-201ENST00000277198 OR5L1Q8NGL2 311 aa11.09□□□□□ -0.63
C9orf3-201ENST00000277198 PIGCQ92535 297 aa11.09□□□□□ -0.63
C9orf3-201ENST00000277198 WFDC1Q9HC57 220 aa11.09□□□□□ -0.63
C9orf3-201ENST00000277198 C19orf12Q9NSK7 152 aa11.09□□□□□ -0.63
C9orf3-201ENST00000277198 ZNF581Q9P0T4 197 aa11.09□□□□□ -0.63
C9orf3-201ENST00000277198 CLEC18AA5D8T8 446 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 TRDCB7Z8K6 153 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 CEACAM4O75871 244 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 MT-ND4LP03901 98 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 COX5BP10606 129 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms