RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 OR2W3Q7Z3T1 314 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 VMO1Q7Z5L0 202 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 GPR141Q7Z602 305 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 C11orf42Q8N5U0 333 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 KIR3DL3Q8N743 410 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 NANPQ8TBE9 248 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 DMRTB1Q96MA1 342 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 LPAR5Q9H1C0 372 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 LIN7BQ9HAP6 207 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 SIRT7Q9NRC8 400 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 RCC2Q9P258 522 aaKnown RBP10.48□□□□□ -0.73
SS18-202ENST00000269138 DAPK2Q9UIK4 370 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 PEX16Q9Y5Y5 336 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 SOX21Q9Y651 276 aaPredicted RBP10.48□□□□□ -0.73
SS18-202ENST00000269138 TRAV39A0A0B4J263 110 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 ODAMA1E959 279 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 FAM90A10PA6NDY2 464 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 FAM90A18PA6NE21 464 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 FAM90A16PA6NEW6 464 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 FAM90A20PA6NIJ5 464 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 FAM90A8PA6NJQ4 464 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 FAM90A7PA6NKC0 464 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 FAM90A22PA8MWA6 464 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 FAM90A12PA8MX19 464 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 FAM90A5PA8MXJ8 464 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 FAM90A23PA8MXZ1 464 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 FAM90A15PP0C7V4 464 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 FAM90A13PP0C7W8 464 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 FAM90A14PP0C7W9 464 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 FAM90A24PP0C7X0 464 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 FUT3P21217 361 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 RPS19P39019 145 aaKnown RBP10.47□□□□□ -0.73
SS18-202ENST00000269138 MEF2CQ06413 473 aaPredicted RBP10.47□□□□□ -0.73
SS18-202ENST00000269138 RSBN1Q5VWQ0 802 aaPredicted RBP10.47□□□□□ -0.73
SS18-202ENST00000269138 SFXN4Q6P4A7 337 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 ANKRD13BQ86YJ7 626 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 PDZD9Q8IXQ8 264 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 CMTM4Q8IZR5 234 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 DYRK2Q92630 601 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 LHX4Q969G2 390 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 TM2D1Q9BX74 207 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 FBLN5Q9UBX5 448 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 KIF25Q9UIL4 384 aa10.47□□□□□ -0.73
SS18-202ENST00000269138 TRAV40A0A0B4J280 105 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 hADV38S2A0JD32 116 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 UBE2QL1A1L167 161 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 M0R1W7 72 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 SOCS1O15524 211 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 PDCD6O75340 191 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 PAHP00439 452 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 ZNF728P0DKX0 622 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 SNRPBP14678 240 aaKnown RBP10.46□□□□□ -0.74
SS18-202ENST00000269138 CHATP28329 748 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 RPL5P46777 297 aaKnown RBP10.46□□□□□ -0.74
SS18-202ENST00000269138 KLRD1Q13241 179 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 CTF1Q16619 201 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 NKAPLQ5M9Q1 402 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 IDNKQ5T6J7 187 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 C1orf122Q6ZSJ8 110 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 NEK7Q8TDX7 302 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 C22orf15Q8WYQ4 148 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 RAB22AQ9UL26 194 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 LINC00312Q9Y6C7 94 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 NF1P21359 2839 aa10.46□□□□□ -0.74
SS18-202ENST00000269138 MEIKINA0A087WXM9 373 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 CENPVL3A0A0U1RRI6 287 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 FUOMA2VDF0 154 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 C17orf98A8MV24 154 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 MCRIP1C9JLW8 97 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 GABARAPO95166 117 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 FAM157CP0CG43 387 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 PRTN3P24158 256 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 BLVRBP30043 206 aaPredicted RBP10.45□□□□□ -0.74
SS18-202ENST00000269138 KCNJ3P48549 501 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 SERPINB10P48595 397 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 VEGFCP49767 419 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 RUSC1-AS1Q66K80 236 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 BRD3OSQ6XYD6 125 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 C6orf201Q7Z4U5 140 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 TRAPPC6BQ86SZ2 158 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 BCL6BQ8N143 479 aaPredicted RBP10.45□□□□□ -0.74
SS18-202ENST00000269138 FAM89BQ8N5H3 189 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 OR13A1Q8NGR1 328 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 CORO2AQ92828 525 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 TNFRSF14Q92956 283 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 NEDD4LQ96PU5 975 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 SULT4A1Q9BR01 284 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 URM1Q9BTM9 101 aaKnown RBP10.45□□□□□ -0.74
SS18-202ENST00000269138 FAAP24Q9BTP7 215 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 BARHL1Q9BZE3 327 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 SPACA1Q9HBV2 294 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 ZNF69Q9UC07 566 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 SCOCQ9UIL1 159 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 NUP50Q9UKX7 468 aa10.45□□□□□ -0.74
SS18-202ENST00000269138 TRGV10A0A0A0MS01 117 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 A0A1W2PPH5 198 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 A0A1W2PRD5 423 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 A0A1W2PRF3 423 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 A0A1W2PRM7 423 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 FOXI3A8MTJ6 420 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms