RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 ZNF506Q5JVG8 444 aa9.96□□□□□ -0.82
CHFR-201ENST00000266880 COA4Q9NYJ1 87 aa9.96□□□□□ -0.82
CHFR-201ENST00000266880 PHIPQ8WWQ0 1821 aa9.96□□□□□ -0.82
CHFR-201ENST00000266880 TMEM202A6NGA9 273 aa9.96□□□□□ -0.82
CHFR-201ENST00000266880 IL13RA2Q14627 380 aa9.96□□□□□ -0.82
CHFR-201ENST00000266880 SDF2Q99470 211 aa9.96□□□□□ -0.82
CHFR-201ENST00000266880 ROS1P08922 2347 aa9.96□□□□□ -0.82
CHFR-201ENST00000266880 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 PSG5Q15238 335 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 PRSS54Q6PEW0 395 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 ZADH2Q8N4Q0 377 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 OR2Z1Q8NG97 314 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 PTX4Q96A99 478 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 ADTRPQ96IZ2 230 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 KCNAB3O43448 404 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 MBPP02686 304 aaPredicted RBP9.95□□□□□ -0.82
CHFR-201ENST00000266880 PPIAP62937 165 aaKnown RBP9.95□□□□□ -0.82
CHFR-201ENST00000266880 IL24Q13007 206 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 PRNTQ86SH4 94 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 TEX101Q9BY14 249 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 C19orf53Q9UNZ5 99 aaPredicted RBP9.95□□□□□ -0.82
CHFR-201ENST00000266880 KCNK7Q9Y2U2 307 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 CLDN16Q9Y5I7 305 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 KHDC3LQ587J8 217 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 FGF20Q9NP95 211 aaPredicted RBP9.95□□□□□ -0.82
CHFR-201ENST00000266880 SLC17A5Q9NRA2 495 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 TREM2Q9NZC2 230 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 NTMQ9P121 344 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 ZNF391Q9UJN7 358 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 LINC00862A6NCI5 91 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 AGERQ15109 404 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 GDE1Q9NZC3 331 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 VAX2Q9UIW0 290 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 SBK3P0C264 359 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 GRAMD2BQ96HH9 432 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 TLCD2A6NGC4 264 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 TM4SF1P30408 202 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 ATOH7Q8N100 152 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 FOCADQ5VW36 1801 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 SLCO2B1O94956 709 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 GUCD1Q96NT3 240 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 OR1F12Q8NHA8 337 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 ARRDC5A6NEK1 342 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 MRPL52Q86TS9 123 aaKnown RBP9.95□□□□□ -0.82
CHFR-201ENST00000266880 NIT1Q86X76 327 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 CYB561D1Q8N8Q1 229 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 EID2BQ96D98 161 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 MFRPQ9BY79 579 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 MTFP1Q9UDX5 166 aa9.95□□□□□ -0.82
CHFR-201ENST00000266880 DNAJC25-GNG10A0A024R161 153 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 P2RY4P51582 365 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 TNFRSF9Q07011 255 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 IGFBP7Q16270 282 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 ANKRD55Q3KP44 614 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 ALKBH3Q96Q83 286 aaPredicted RBP9.94□□□□□ -0.82
CHFR-201ENST00000266880 IL23AQ9NPF7 189 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 IL36GQ9NZH8 169 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 A0A1B0GX78 115 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 VAMP5O95183 116 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 FAM74A3Q4VXF1 159 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 TP53I13Q8NBR0 393 aaPredicted RBP9.94□□□□□ -0.82
CHFR-201ENST00000266880 WBP2Q969T9 261 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 SNRNP40Q96DI7 357 aaKnown RBP9.94□□□□□ -0.82
CHFR-201ENST00000266880 COL25A1Q9BXS0 654 aaPredicted RBP9.94□□□□□ -0.82
CHFR-201ENST00000266880 OR2W1Q9Y3N9 320 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 USP3Q9Y6I4 520 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 CLDN15P56746 228 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 FAHD1Q6P587 224 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 RFESDQ8TAC1 157 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 TJP1Q07157 1748 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 COL14A1Q05707 1796 aaKnown RBP9.94□□□□□ -0.82
CHFR-201ENST00000266880 MARCH11A6NNE9 402 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 HSPB2A8KAH6 182 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 FAM157CP0CG43 387 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 HSPB2Q16082 182 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 SFTPA2Q8IWL1 248 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 SFTPA1Q8IWL2 248 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 OR1K1Q8NGR3 316 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 RNF133Q8WVZ7 376 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 TMEM167BQ9NRX6 74 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 TNFRSF19Q9NS68 423 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 TIMP1P01033 207 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 RPEQ96AT9 228 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 B9D1Q9UPM9 204 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 CCL26Q9Y258 94 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 SERTM1A2A2V5 107 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 CTAG2O75638 210 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 HIST1H1DP16402 221 aaKnown RBP9.94□□□□□ -0.82
CHFR-201ENST00000266880 RCC1P18754 421 aaPredicted RBP9.94□□□□□ -0.82
CHFR-201ENST00000266880 TMEM255AQ5JRV8 349 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 RPS4Y2Q8TD47 263 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 TBL2Q9Y4P3 447 aaKnown RBP9.94□□□□□ -0.82
CHFR-201ENST00000266880 ZNF362Q5T0B9 420 aaPredicted RBP9.94□□□□□ -0.82
CHFR-201ENST00000266880 OR4P4Q8NGL7 312 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 APELAP0DMC3 54 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 BOD1L2Q8IYS8 172 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 VSIG4Q9Y279 399 aa9.94□□□□□ -0.82
CHFR-201ENST00000266880 KLF3P57682 345 aaPredicted RBP9.93□□□□□ -0.82
CHFR-201ENST00000266880 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.93□□□□□ -0.82
CHFR-201ENST00000266880 BEND2Q8NDZ0 799 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms