RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 BORCS5Q969J3 196 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 TRIM63Q969Q1 353 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 CMSS1Q9BQ75 279 aaKnown RBP8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 DCTN5Q9BTE1 182 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 ST6GALNAC5Q9BVH7 336 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 CHODLQ9H9P2 273 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 CSMD2Q7Z408 3487 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 ITPR2Q14571 2701 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 UNC79Q9P2D8 2635 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 SERPINE3A8MV23 424 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 ADAM20O43506 726 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 UPK1BO75841 260 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 LPLP06858 475 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 GDNFP39905 211 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 GLIPR1P48060 266 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 MRPS11P82912 194 aaKnown RBP8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 EDDM3AQ14507 147 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 GRK1Q15835 563 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 PNLIPRP3Q17RR3 467 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 OR52W1Q6IF63 320 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 PEG10Q86TG7 708 aaKnown RBP8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 TMEM185AQ8NFB2 350 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 SETD6Q8TBK2 473 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 SDSLQ96GA7 329 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 COQ2Q96H96 371 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 POM121Q96HA1 1249 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 ZNF665Q9H7R5 613 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 SPACA1Q9HBV2 294 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 CHMP1AQ9HD42 196 aaPredicted RBP8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 MYOZ1Q9NP98 299 aaPredicted RBP8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 ZNF701Q9NV72 531 aaPredicted RBP8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 CTSZQ9UBR2 303 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 MTFP1Q9UDX5 166 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 DSCAML1Q8TD84 2053 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 NAV2Q8IVL1 2488 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 MALRD1Q5VYJ5 2156 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 K7N7A8 449 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 SIGLEC5O15389 551 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 RBBP9O75884 186 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 TPPPO94811 219 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 TK1P04183 234 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 RCC1P18754 421 aaPredicted RBP8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 HLA-DMAP28067 261 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 MDH2P40926 338 aaKnown RBP8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 GPR6P46095 362 aaPredicted RBP8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 TMEM33P57088 247 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 SEC61A1P61619 476 aaKnown RBP8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 RBM39Q14498 530 aaKnown RBP8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 ATPAF1Q5TC12 328 aaPredicted RBP8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 TRIQKQ629K1 86 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 ZNF57Q68EA5 555 aaPredicted RBP8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 FAAP20Q6NZ36 180 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 LYSMD2Q8IV50 215 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 UBALD1Q8TB05 177 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 MRPL30Q8TCC3 161 aaKnown RBP8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 C15orf40Q8WUR7 153 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 RAB1CQ92928 201 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 SNAPC3Q92966 411 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 SNX22Q96L94 193 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 CCDC32Q9BV29 185 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 SCPEP1Q9HB40 452 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 RABL2AQ9UBK7 228 aaPredicted RBP8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 KIF25Q9UIL4 384 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 RABL2BQ9UNT1 228 aa8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 RBMX2Q9Y388 322 aaKnown RBP8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 YLPM1P49750 1951 aaKnown RBP8.1□□□□□ -1.11
SNRNP40-201ENST00000263694 VPS13CQ709C8 3753 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 NKX6-3A6NJ46 265 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 CEACAM18A8MTB9 384 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 SULT1C2O00338 296 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 PLA2G10O15496 165 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 NAPSAO96009 420 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 MT-ND4P03905 459 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 FCGR3AP08637 254 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 NDUFB7P17568 137 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 PDLIM4P50479 330 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 EDDM3BP56851 147 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 IL13RA1P78552 427 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 MRPS15P82914 257 aaKnown RBP8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 DCTN2Q13561 401 aaKnown RBP8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 KRBOX4Q5JUW0 171 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 RSBN1Q5VWQ0 802 aaPredicted RBP8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 ZNF497Q6ZNH5 498 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 ZNF561Q8N587 486 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 OR4D10Q8NGI6 311 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 TIMD4Q96H15 378 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 OCSTAMPQ9BR26 566 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 BPESC1Q9GZL8 116 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 SEBOXQ9HB31 216 aaPredicted RBP8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 IFT46Q9NQC8 304 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 TBC1D24Q9ULP9 559 aa8.09□□□□□ -1.11
SNRNP40-201ENST00000263694 MEIKINA0A087WXM9 373 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 ANKRD20A5PA0PJZ0 165 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 M0QYG6 137 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 DVL1O14640 695 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 CA11O75493 328 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 PMP2P02689 132 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 CD3DP04234 171 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 CSN2P05814 226 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms