RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 COL10A1Q03692 680 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 LHFPL1Q86WI0 220 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 TGIF2LYQ8IUE0 185 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 OR5T2Q8NGG2 359 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 HPS1Q92902 700 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 GHITMQ9H3K2 345 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 NECAP2Q9NVZ3 263 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 METRNQ9UJH8 293 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 CACNA1DQ01668 2161 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 ZFYVE26Q68DK2 2539 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 IGHV3OR15-7A0A075B7D8 119 aa19.19■□□□□ 0.66
SMARCB1-201ENST00000263121 TMEM82A0PJX8 343 aa19.19■□□□□ 0.66
SMARCB1-201ENST00000263121 ANXA7P20073 488 aaKnown RBP19.19■□□□□ 0.66
SMARCB1-201ENST00000263121 TSPAN5P62079 268 aa19.19■□□□□ 0.66
SMARCB1-201ENST00000263121 TMEM17Q86X19 198 aa19.19■□□□□ 0.66
SMARCB1-201ENST00000263121 TERB2Q8NHR7 220 aa19.19■□□□□ 0.66
SMARCB1-201ENST00000263121 ZNF222Q9UK12 451 aa19.19■□□□□ 0.66
SMARCB1-201ENST00000263121 H7C1Q1 480 aa19.18■□□□□ 0.66
SMARCB1-201ENST00000263121 GSTT2P0CG29 244 aa19.18■□□□□ 0.66
SMARCB1-201ENST00000263121 IRF2P14316 349 aa19.18■□□□□ 0.66
SMARCB1-201ENST00000263121 OR3A1P47881 315 aa19.18■□□□□ 0.66
SMARCB1-201ENST00000263121 KCNJ3P48549 501 aa19.18■□□□□ 0.66
SMARCB1-201ENST00000263121 ATXN7L3Q14CW9 347 aaPredicted RBP19.18■□□□□ 0.66
SMARCB1-201ENST00000263121 FAM201AQ5SY85 155 aa19.18■□□□□ 0.66
SMARCB1-201ENST00000263121 ATPAF1Q5TC12 328 aaPredicted RBP19.18■□□□□ 0.66
SMARCB1-201ENST00000263121 C17orf107Q6ZR85 190 aa19.18■□□□□ 0.66
SMARCB1-201ENST00000263121 ZDHHC22Q8N966 263 aa19.18■□□□□ 0.66
SMARCB1-201ENST00000263121 BEX2Q9BXY8 128 aa19.18■□□□□ 0.66
SMARCB1-201ENST00000263121 BEX1Q9HBH7 125 aa19.18■□□□□ 0.66
SMARCB1-201ENST00000263121 DCAF16Q9NXF7 216 aa19.18■□□□□ 0.66
SMARCB1-201ENST00000263121 VSIG4Q9Y279 399 aa19.18■□□□□ 0.66
SMARCB1-201ENST00000263121 DYSFO75923 2080 aa19.18■□□□□ 0.66
SMARCB1-201ENST00000263121 ROS1P08922 2347 aa19.18■□□□□ 0.66
SMARCB1-201ENST00000263121 CEACAM18A8MTB9 384 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 RLN1P04808 185 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 IL5P05113 134 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 PPOXP50336 477 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 AADACL3Q5VUY0 350 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 ZNF660Q6AZW8 331 aaPredicted RBP19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 SLC36A1Q7Z2H8 476 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 ANGPTL6Q8NI99 470 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 ARFGEF3Q5TH69 2177 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 KIR2DS1A0A191URI9 304 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 HMX3A6NHT5 357 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 LRRC30A6NM36 301 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 TRDCB7Z8K6 153 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 ZNF737O75373 536 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 RNF224P0DH78 156 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 TRAPPC2P0DI81 140 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 TRAPPC2BP0DI82 140 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 OR5H8P0DN80 308 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 VSIG10L2P0DP72 767 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 KIR2DS4P43632 304 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 KIR2DS1Q14954 304 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 TEX36Q5VZQ5 186 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 GLDNQ6ZMI3 551 aaPredicted RBP19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 MOB1BQ7L9L4 216 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 SHARPINQ9H0F6 387 aa19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 ALX4Q9H161 411 aaPredicted RBP19.17■□□□□ 0.66
SMARCB1-201ENST00000263121 TANC2Q9HCD6 1990 aa19.16■□□□□ 0.66
SMARCB1-201ENST00000263121 A0A1W2PPR1 153 aa19.16■□□□□ 0.66
SMARCB1-201ENST00000263121 PAX5Q02548 391 aa19.16■□□□□ 0.66
SMARCB1-201ENST00000263121 STUMQ69YW2 141 aa19.16■□□□□ 0.66
SMARCB1-201ENST00000263121 SLC35E4Q6ICL7 350 aa19.16■□□□□ 0.66
SMARCB1-201ENST00000263121 DHRS11Q6UWP2 260 aa19.16■□□□□ 0.66
SMARCB1-201ENST00000263121 MED30Q96HR3 178 aa19.16■□□□□ 0.66
SMARCB1-201ENST00000263121 MYOZ1Q9NP98 299 aaPredicted RBP19.16■□□□□ 0.66
SMARCB1-201ENST00000263121 CBLN4Q9NTU7 201 aa19.16■□□□□ 0.66
SMARCB1-201ENST00000263121 SPTBN1Q01082 2364 aaKnown RBP19.15■□□□□ 0.66
SMARCB1-201ENST00000263121 FABP7O15540 132 aa19.15■□□□□ 0.66
SMARCB1-201ENST00000263121 MUC1P15941 1255 aaPredicted RBP19.15■□□□□ 0.66
SMARCB1-201ENST00000263121 RCC1P18754 421 aaPredicted RBP19.15■□□□□ 0.66
SMARCB1-201ENST00000263121 METTL11BQ5VVY1 283 aa19.15■□□□□ 0.66
SMARCB1-201ENST00000263121 C11orf71Q6IPW1 123 aa19.15■□□□□ 0.66
SMARCB1-201ENST00000263121 OR6F1Q8NGZ6 308 aa19.15■□□□□ 0.66
SMARCB1-201ENST00000263121 COQ2Q96H96 371 aa19.15■□□□□ 0.66
SMARCB1-201ENST00000263121 OR51J1Q9H342 316 aa19.15■□□□□ 0.66
SMARCB1-201ENST00000263121 LIME1Q9H400 295 aa19.15■□□□□ 0.66
SMARCB1-201ENST00000263121 MBNL3Q9NUK0 354 aaKnown RBP19.15■□□□□ 0.66
SMARCB1-201ENST00000263121 ZNF221Q9UK13 617 aa19.15■□□□□ 0.66
SMARCB1-201ENST00000263121 FBXO9Q9UK97 447 aaPredicted RBP19.15■□□□□ 0.66
SMARCB1-201ENST00000263121 TMEM30CPA0ZSE6 113 aa19.14■□□□□ 0.66
SMARCB1-201ENST00000263121 OOEPA6NGQ2 149 aa19.14■□□□□ 0.66
SMARCB1-201ENST00000263121 TMEM178BH3BS89 294 aa19.14■□□□□ 0.66
SMARCB1-201ENST00000263121 HPXP02790 462 aa19.14■□□□□ 0.66
SMARCB1-201ENST00000263121 SCTP09683 121 aa19.14■□□□□ 0.66
SMARCB1-201ENST00000263121 GABRA2P47869 451 aa19.14■□□□□ 0.66
SMARCB1-201ENST00000263121 HLA-DRB3P79483 266 aa19.14■□□□□ 0.66
SMARCB1-201ENST00000263121 PEG10Q86TG7 708 aaKnown RBP19.14■□□□□ 0.66
SMARCB1-201ENST00000263121 ASCC1Q8N9N2 400 aaKnown RBP19.14■□□□□ 0.66
SMARCB1-201ENST00000263121 MARCH1Q8TCQ1 289 aa19.14■□□□□ 0.66
SMARCB1-201ENST00000263121 PPP1R14BQ96C90 147 aa19.14■□□□□ 0.66
SMARCB1-201ENST00000263121 ZNF2Q9BSG1 426 aaPredicted RBP19.14■□□□□ 0.66
SMARCB1-201ENST00000263121 TMEM106BQ9NUM4 274 aa19.14■□□□□ 0.66
SMARCB1-201ENST00000263121 ING3Q9NXR8 418 aa19.14■□□□□ 0.66
SMARCB1-201ENST00000263121 OR5H14A6NHG9 310 aa19.14■□□□□ 0.65
SMARCB1-201ENST00000263121 CD8AP01732 235 aa19.14■□□□□ 0.65
SMARCB1-201ENST00000263121 DANCRP0C864 163 aa19.14■□□□□ 0.65
SMARCB1-201ENST00000263121 FPR2P25090 351 aa19.14■□□□□ 0.65
SMARCB1-201ENST00000263121 NPY4RP50391 375 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms