RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 TMEM11P17152 192 aa9.79□□□□□ -0.84
TRAF4-202ENST00000262396 RAB3AP20336 220 aa9.79□□□□□ -0.84
TRAF4-202ENST00000262396 GNG10P50151 68 aa9.79□□□□□ -0.84
TRAF4-202ENST00000262396 ISL1P61371 349 aa9.79□□□□□ -0.84
TRAF4-202ENST00000262396 SNRPGP62308 76 aaKnown RBP9.79□□□□□ -0.84
TRAF4-202ENST00000262396 SLC35B1P78383 322 aa9.79□□□□□ -0.84
TRAF4-202ENST00000262396 MRPL28Q13084 256 aaKnown RBP9.79□□□□□ -0.84
TRAF4-202ENST00000262396 GALEQ14376 348 aa9.79□□□□□ -0.84
TRAF4-202ENST00000262396 KISS1Q15726 138 aa9.79□□□□□ -0.84
TRAF4-202ENST00000262396 ZSCAN26Q16670 478 aa9.79□□□□□ -0.84
TRAF4-202ENST00000262396 ZNF691Q5VV52 312 aa9.79□□□□□ -0.84
TRAF4-202ENST00000262396 FDX2Q6P4F2 183 aa9.79□□□□□ -0.84
TRAF4-202ENST00000262396 OR10AC1Q8NH08 325 aa9.79□□□□□ -0.84
TRAF4-202ENST00000262396 NEK7Q8TDX7 302 aa9.79□□□□□ -0.84
TRAF4-202ENST00000262396 TNFAIP8L1Q8WVP5 186 aa9.79□□□□□ -0.84
TRAF4-202ENST00000262396 PELI1Q96FA3 418 aa9.79□□□□□ -0.84
TRAF4-202ENST00000262396 RCC1LQ96I51 464 aaKnown RBP9.79□□□□□ -0.84
TRAF4-202ENST00000262396 MYRFQ9Y2G1 1151 aa9.79□□□□□ -0.84
TRAF4-202ENST00000262396 PRKDCP78527 4128 aaKnown RBP9.78□□□□□ -0.84
TRAF4-202ENST00000262396 KBTBD11-OT1A0A1B0GTJ5 212 aa9.78□□□□□ -0.84
TRAF4-202ENST00000262396 SERPINE3A8MV23 424 aa9.78□□□□□ -0.84
TRAF4-202ENST00000262396 HTR3BO95264 441 aa9.78□□□□□ -0.84
TRAF4-202ENST00000262396 CSTBP04080 98 aaKnown RBP9.78□□□□□ -0.84
TRAF4-202ENST00000262396 CSN2P05814 226 aa9.78□□□□□ -0.84
TRAF4-202ENST00000262396 LMO1P25800 156 aa9.78□□□□□ -0.84
TRAF4-202ENST00000262396 SOX2P48431 317 aa9.78□□□□□ -0.84
TRAF4-202ENST00000262396 ALDH3A2P51648 485 aa9.78□□□□□ -0.84
TRAF4-202ENST00000262396 PPP3R1P63098 170 aa9.78□□□□□ -0.84
TRAF4-202ENST00000262396 MADCAM1Q13477 382 aa9.78□□□□□ -0.84
TRAF4-202ENST00000262396 HNF4GQ14541 408 aa9.78□□□□□ -0.84
TRAF4-202ENST00000262396 OR56B4Q8NH76 319 aa9.78□□□□□ -0.84
TRAF4-202ENST00000262396 HAVCR2Q8TDQ0 301 aa9.78□□□□□ -0.84
TRAF4-202ENST00000262396 MRGPRDQ8TDS7 321 aa9.78□□□□□ -0.84
TRAF4-202ENST00000262396 LGALS12Q96DT0 336 aa9.78□□□□□ -0.84
TRAF4-202ENST00000262396 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.78□□□□□ -0.84
TRAF4-202ENST00000262396 CALYQ9NYX4 217 aa9.78□□□□□ -0.84
TRAF4-202ENST00000262396 IDI2-AS1Q9NZ38 188 aa9.78□□□□□ -0.84
TRAF4-202ENST00000262396 KIF25Q9UIL4 384 aa9.78□□□□□ -0.84
TRAF4-202ENST00000262396 ING4Q9UNL4 249 aa9.78□□□□□ -0.84
TRAF4-202ENST00000262396 PLXNB1O43157 2135 aa9.77□□□□□ -0.84
TRAF4-202ENST00000262396 OR4C45A6NMZ5 311 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 ADARB2-AS1A8MUL3 147 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 IGLV1-47P01700 117 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 ALPLP05186 524 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 SNRNP70P08621 437 aaKnown RBP9.77□□□□□ -0.85
TRAF4-202ENST00000262396 CD34P28906 385 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 GDNFP39905 211 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 RAB7AP51149 207 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 RAB25P57735 213 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 KLHL22Q53GT1 634 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 ZFP1Q6P2D0 407 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 UNQ9370/PRO34162Q6UXP9 181 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 MOB3BQ86TA1 216 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 FOXRED2Q8IWF2 684 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 SYS1Q8N2H4 156 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 OSR2Q8N2R0 312 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 CBR4Q8N4T8 237 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 RFESDQ8TAC1 157 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 CHPT1Q8WUD6 406 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 LEAP2Q969E1 77 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 COQ2Q96H96 371 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 PPIL3Q9H2H8 161 aaKnown RBP9.77□□□□□ -0.85
TRAF4-202ENST00000262396 AMBNQ9NP70 447 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 INPP5EQ9NRR6 644 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 EXOGQ9Y2C4 368 aaKnown RBP9.77□□□□□ -0.85
TRAF4-202ENST00000262396 ZNF281Q9Y2X9 895 aa9.77□□□□□ -0.85
TRAF4-202ENST00000262396 RPL36Q9Y3U8 105 aaKnown RBP9.77□□□□□ -0.85
TRAF4-202ENST00000262396 NCBP2LA6PVI3 153 aaKnown RBP9.76□□□□□ -0.85
TRAF4-202ENST00000262396 J3QR06 171 aa9.76□□□□□ -0.85
TRAF4-202ENST00000262396 OR7C1O76099 320 aaPredicted RBP9.76□□□□□ -0.85
TRAF4-202ENST00000262396 IL1AP01583 271 aa9.76□□□□□ -0.85
TRAF4-202ENST00000262396 IL3RAP26951 378 aa9.76□□□□□ -0.85
TRAF4-202ENST00000262396 SLC25A30Q5SVS4 291 aa9.76□□□□□ -0.85
TRAF4-202ENST00000262396 ATAD3CQ5T2N8 411 aa9.76□□□□□ -0.85
TRAF4-202ENST00000262396 Q6P435 159 aa9.76□□□□□ -0.85
TRAF4-202ENST00000262396 STX19Q8N4C7 294 aa9.76□□□□□ -0.85
TRAF4-202ENST00000262396 DRAM1Q8N682 238 aa9.76□□□□□ -0.85
TRAF4-202ENST00000262396 ZNF555Q8NEP9 628 aa9.76□□□□□ -0.85
TRAF4-202ENST00000262396 WFDC9Q8NEX5 89 aa9.76□□□□□ -0.85
TRAF4-202ENST00000262396 OR10K1Q8NGX5 313 aa9.76□□□□□ -0.85
TRAF4-202ENST00000262396 CNIH3Q8TBE1 160 aa9.76□□□□□ -0.85
TRAF4-202ENST00000262396 KIRREL1Q96J84 757 aa9.76□□□□□ -0.85
TRAF4-202ENST00000262396 PDCD1LG2Q9BQ51 273 aa9.76□□□□□ -0.85
TRAF4-202ENST00000262396 MCRIP2Q9BUT9 160 aaKnown RBP9.76□□□□□ -0.85
TRAF4-202ENST00000262396 C9orf16Q9BUW7 83 aa9.76□□□□□ -0.85
TRAF4-202ENST00000262396 METTL9Q9H1A3 318 aa9.76□□□□□ -0.85
TRAF4-202ENST00000262396 ISG20L2Q9H9L3 353 aaKnown RBP9.76□□□□□ -0.85
TRAF4-202ENST00000262396 PAK1IP1Q9NWT1 392 aaPredicted RBP9.76□□□□□ -0.85
TRAF4-202ENST00000262396 CHCHD3Q9NX63 227 aaKnown RBP9.76□□□□□ -0.85
TRAF4-202ENST00000262396 FAM53CQ9NYF3 392 aa9.76□□□□□ -0.85
TRAF4-202ENST00000262396 AASSQ9UDR5 926 aa9.76□□□□□ -0.85
TRAF4-202ENST00000262396 ZMAT5Q9UDW3 170 aaKnown RBP9.76□□□□□ -0.85
TRAF4-202ENST00000262396 NOTCH3Q9UM47 2321 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 ZFPL1O95159 310 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 KCNJ3P48549 501 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 CD69Q07108 199 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 RAB40BQ12829 278 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 MED21Q13503 144 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 IL13RA2Q14627 380 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 C17orf58Q2M2W7 97 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms