RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 ELOVL5Q9NYP7 299 aa23.45■■□□□ 1.34
CCM2-201ENST00000258781 FZR1Q9UM11 496 aa23.45■■□□□ 1.34
CCM2-201ENST00000258781 HSPB6O14558 160 aa23.44■■□□□ 1.34
CCM2-201ENST00000258781 NXPH2O95156 264 aa23.44■■□□□ 1.34
CCM2-201ENST00000258781 SORDQ00796 357 aa23.44■■□□□ 1.34
CCM2-201ENST00000258781 MZT1Q08AG7 82 aa23.44■■□□□ 1.34
CCM2-201ENST00000258781 ZNF146Q15072 292 aa23.44■■□□□ 1.34
CCM2-201ENST00000258781 SPIN3Q5JUX0 258 aa23.44■■□□□ 1.34
CCM2-201ENST00000258781 MOB3AQ96BX8 217 aa23.44■■□□□ 1.34
CCM2-201ENST00000258781 HEXA-AS1Q9H8Q6 139 aa23.44■■□□□ 1.34
CCM2-201ENST00000258781 HES4Q9HCC6 221 aa23.44■■□□□ 1.34
CCM2-201ENST00000258781 RAB18Q9NP72 206 aa23.44■■□□□ 1.34
CCM2-201ENST00000258781 ZNF44P15621 663 aa23.43■■□□□ 1.34
CCM2-201ENST00000258781 CXCL2P19875 107 aa23.43■■□□□ 1.34
CCM2-201ENST00000258781 MDH2P40926 338 aaKnown RBP23.43■■□□□ 1.34
CCM2-201ENST00000258781 CASP6P55212 293 aa23.43■■□□□ 1.34
CCM2-201ENST00000258781 FAM27E3Q08E93 113 aa23.43■■□□□ 1.34
CCM2-201ENST00000258781 MRPL30Q8TCC3 161 aaKnown RBP23.43■■□□□ 1.34
CCM2-201ENST00000258781 RND1Q92730 232 aa23.43■■□□□ 1.34
CCM2-201ENST00000258781 RDH5Q92781 318 aa23.43■■□□□ 1.34
CCM2-201ENST00000258781 PIK3IP1Q96FE7 263 aa23.43■■□□□ 1.34
CCM2-201ENST00000258781 FXYD6-FXYD2A0A087WZ82 144 aa23.43■■□□□ 1.34
CCM2-201ENST00000258781 L7N2F9 121 aa23.43■■□□□ 1.34
CCM2-201ENST00000258781 HS3ST1O14792 307 aa23.43■■□□□ 1.34
CCM2-201ENST00000258781 KNG1P01042 644 aa23.43■■□□□ 1.34
CCM2-201ENST00000258781 ZNF250P15622 560 aa23.43■■□□□ 1.34
CCM2-201ENST00000258781 SSTR2P30874 369 aa23.43■■□□□ 1.34
CCM2-201ENST00000258781 SHEQ5VZ18 495 aa23.43■■□□□ 1.34
CCM2-201ENST00000258781 FIP1L1Q6UN15 594 aaKnown RBP23.43■■□□□ 1.34
CCM2-201ENST00000258781 TREM2Q9NZC2 230 aa23.43■■□□□ 1.34
CCM2-201ENST00000258781 ATP23Q9Y6H3 246 aa23.43■■□□□ 1.34
CCM2-201ENST00000258781 TRAV14DV4A0A0A6YYC5 116 aa23.42■■□□□ 1.34
CCM2-201ENST00000258781 CRYM-AS1A6NIL9 109 aa23.42■■□□□ 1.34
CCM2-201ENST00000258781 TRDCB7Z8K6 153 aa23.42■■□□□ 1.34
CCM2-201ENST00000258781 GLRXP35754 106 aa23.42■■□□□ 1.34
CCM2-201ENST00000258781 NKX6-1P78426 367 aaPredicted RBP23.42■■□□□ 1.34
CCM2-201ENST00000258781 ANKRD55Q3KP44 614 aa23.42■■□□□ 1.34
CCM2-201ENST00000258781 ZNF880Q6PDB4 577 aa23.42■■□□□ 1.34
CCM2-201ENST00000258781 SGPP2Q8IWX5 399 aa23.42■■□□□ 1.34
CCM2-201ENST00000258781 C11orf53Q8IXP5 236 aa23.42■■□□□ 1.34
CCM2-201ENST00000258781 COMMD9Q9P000 198 aa23.42■■□□□ 1.34
CCM2-201ENST00000258781 IFNA2P01563 188 aa23.41■■□□□ 1.34
CCM2-201ENST00000258781 CTXN2P0C2S0 81 aa23.41■■□□□ 1.34
CCM2-201ENST00000258781 HERV-K104P61576 105 aa23.41■■□□□ 1.34
CCM2-201ENST00000258781 ALKBH2Q6NS38 261 aa23.41■■□□□ 1.34
CCM2-201ENST00000258781 GSG1LQ6UXU4 331 aa23.41■■□□□ 1.34
CCM2-201ENST00000258781 TOMM40LQ969M1 308 aa23.41■■□□□ 1.34
CCM2-201ENST00000258781 DIDO1Q9BTC0 2240 aaKnown RBP23.41■■□□□ 1.34
CCM2-201ENST00000258781 M0R233 179 aa23.41■■□□□ 1.34
CCM2-201ENST00000258781 SH2D1BO14796 132 aa23.41■■□□□ 1.34
CCM2-201ENST00000258781 OR2H2O95918 312 aa23.41■■□□□ 1.34
CCM2-201ENST00000258781 IGSF11Q5DX21 431 aa23.41■■□□□ 1.34
CCM2-201ENST00000258781 SLC38A6Q8IZM9 456 aa23.41■■□□□ 1.34
CCM2-201ENST00000258781 SEC22AQ96IW7 307 aa23.41■■□□□ 1.34
CCM2-201ENST00000258781 MSL2Q9HCI7 577 aa23.41■■□□□ 1.34
CCM2-201ENST00000258781 JKAMPQ9P055 326 aa23.41■■□□□ 1.34
CCM2-201ENST00000258781 HIVEP3Q5T1R4 2406 aa23.4■■□□□ 1.34
CCM2-201ENST00000258781 FAM25EA8MYX2 175 aa23.4■■□□□ 1.34
CCM2-201ENST00000258781 C3orf80F5H4A9 247 aa23.4■■□□□ 1.34
CCM2-201ENST00000258781 H7C1Q1 480 aa23.4■■□□□ 1.34
CCM2-201ENST00000258781 IGHV3-13P01766 116 aa23.4■■□□□ 1.34
CCM2-201ENST00000258781 CCKARP32238 428 aa23.4■■□□□ 1.34
CCM2-201ENST00000258781 SERPINF1P36955 418 aa23.4■■□□□ 1.34
CCM2-201ENST00000258781 PAN3Q58A45 887 aaKnown RBP23.4■■□□□ 1.34
CCM2-201ENST00000258781 OR8H1Q8NGG4 311 aa23.4■■□□□ 1.34
CCM2-201ENST00000258781 SLC33A1O00400 549 aaPredicted RBP23.39■■□□□ 1.34
CCM2-201ENST00000258781 CCL21O00585 134 aa23.39■■□□□ 1.34
CCM2-201ENST00000258781 ARPC5O15511 151 aa23.39■■□□□ 1.34
CCM2-201ENST00000258781 SLC25A4P12235 298 aa23.39■■□□□ 1.34
CCM2-201ENST00000258781 AADACP22760 399 aa23.39■■□□□ 1.34
CCM2-201ENST00000258781 FXYD4P59646 89 aa23.39■■□□□ 1.34
CCM2-201ENST00000258781 RPS23P62266 143 aaKnown RBP23.39■■□□□ 1.34
CCM2-201ENST00000258781 CYCSP99999 105 aaKnown RBP23.39■■□□□ 1.34
CCM2-201ENST00000258781 OPCMLQ14982 345 aa23.39■■□□□ 1.34
CCM2-201ENST00000258781 TMEM65Q6PI78 240 aa23.39■■□□□ 1.34
CCM2-201ENST00000258781 TEX261Q6UWH6 196 aa23.39■■□□□ 1.34
CCM2-201ENST00000258781 NMES1Q9C002 83 aa23.39■■□□□ 1.34
CCM2-201ENST00000258781 U3KQ87 197 aa23.39■■□□□ 1.34
CCM2-201ENST00000258781 C5orf51A6NDU8 294 aa23.39■■□□□ 1.33
CCM2-201ENST00000258781 C16orf97H3BN30 126 aa23.39■■□□□ 1.33
CCM2-201ENST00000258781 ZNF205O95201 554 aa23.39■■□□□ 1.33
CCM2-201ENST00000258781 PPYP01298 95 aa23.39■■□□□ 1.33
CCM2-201ENST00000258781 TK1P04183 234 aa23.39■■□□□ 1.33
CCM2-201ENST00000258781 RPA2P15927 270 aa23.39■■□□□ 1.33
CCM2-201ENST00000258781 RBMXP38159 391 aaKnown RBP23.39■■□□□ 1.33
CCM2-201ENST00000258781 PIGPP57054 158 aa23.39■■□□□ 1.33
CCM2-201ENST00000258781 MSMPQ1L6U9 139 aa23.39■■□□□ 1.33
CCM2-201ENST00000258781 ABCA11PQ4W5N1 156 aa23.39■■□□□ 1.33
CCM2-201ENST00000258781 MOB1BQ7L9L4 216 aa23.39■■□□□ 1.33
CCM2-201ENST00000258781 TMEM165Q9HC07 324 aa23.39■■□□□ 1.33
CCM2-201ENST00000258781 IGHV3-64DA0A0J9YX35 117 aa23.38■■□□□ 1.33
CCM2-201ENST00000258781 TEX13DA0A0J9YY54 714 aaPredicted RBP23.38■■□□□ 1.33
CCM2-201ENST00000258781 ATXN7O15265 892 aaPredicted RBP23.38■■□□□ 1.33
CCM2-201ENST00000258781 SCTP09683 121 aa23.38■■□□□ 1.33
CCM2-201ENST00000258781 WDR82Q6UXN9 313 aa23.38■■□□□ 1.33
CCM2-201ENST00000258781 PPP1R1CQ8WVI7 109 aa23.38■■□□□ 1.33
CCM2-201ENST00000258781 RSRP1Q9BUV0 290 aa23.38■■□□□ 1.33
CCM2-201ENST00000258781 C1orf123Q9NWV4 160 aa23.38■■□□□ 1.33
CCM2-201ENST00000258781 A6NLC8 198 aa23.37■■□□□ 1.33
CCM2-201ENST00000258781 SIRPB1O00241 398 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms