RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 HSPB9Q9BQS6 159 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 COL25A1Q9BXS0 654 aaPredicted RBP6.72□□□□□ -1.33
GPNMB-201ENST00000258733 DUSP16Q9BY84 665 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 TUBB1Q9H4B7 451 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 SPANXA1Q9NS26 97 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 RLIMQ9NVW2 624 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 NAT8BQ9UHF3 227 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 CYSLTR1Q9Y271 337 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 ZNF106Q9H2Y7 1883 aaKnown RBP6.72□□□□□ -1.33
GPNMB-201ENST00000258733 PLPP3O14495 311 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 TIMM8AO60220 97 aaPredicted RBP6.71□□□□□ -1.33
GPNMB-201ENST00000258733 PPP1R3DO95685 299 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 HRASP01112 189 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 KRASP01116 189 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 LINC00032P0C843 101 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 EPCAMP16422 314 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 CELP19835 753 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 TCTAP57738 103 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 FAM3BP58499 235 aaPredicted RBP6.71□□□□□ -1.33
GPNMB-201ENST00000258733 TAS2R31P59538 309 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 MEF2CQ06413 473 aaPredicted RBP6.71□□□□□ -1.33
GPNMB-201ENST00000258733 PSG5Q15238 335 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 UPP1Q16831 310 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 Q6ZSR6 202 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 CENPVQ7Z7K6 275 aaPredicted RBP6.71□□□□□ -1.33
GPNMB-201ENST00000258733 ZDHHC23Q8IYP9 409 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 OR10V1Q8NGI7 309 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 CMTM2Q8TAZ6 248 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 TMEM204Q9BSN7 226 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 SH2D2AQ9NP31 389 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 WASHC3Q9Y3C0 194 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 CSAG2Q9Y5P2 127 aa6.71□□□□□ -1.33
GPNMB-201ENST00000258733 A0A087WUU8 490 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 TRBV6-7A0A0A0MS04 114 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 MEGF11A6BM72 1044 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 ZBTB42B2RXF5 422 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 DIRC3C9JPN6 131 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 EDIL3O43854 480 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 NUPR1O60356 82 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 CELA2BP08218 269 aaPredicted RBP6.71□□□□□ -1.34
GPNMB-201ENST00000258733 NTF3P20783 257 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 RPS4Y1P22090 263 aaKnown RBP6.71□□□□□ -1.34
GPNMB-201ENST00000258733 P2RY1P47900 373 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 PTPRNQ16849 979 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 ACTL10Q5JWF8 245 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 UBE2NLQ5JXB2 153 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 TMEM215Q68D42 235 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 MOB1BQ7L9L4 216 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 CALHM3Q86XJ0 350 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 IL22RA1Q8N6P7 574 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 OR5A1Q8NGJ0 315 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 FLYWCH2Q96CP2 140 aaKnown RBP6.71□□□□□ -1.34
GPNMB-201ENST00000258733 EID2BQ96D98 161 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 PYGO2Q9BRQ0 406 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 WSB2Q9NYS7 404 aaPredicted RBP6.71□□□□□ -1.34
GPNMB-201ENST00000258733 PLA2G2EQ9NZK7 142 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 CLCF1Q9UBD9 225 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 A0A0G2JLL6 359 aaPredicted RBP6.71□□□□□ -1.34
GPNMB-201ENST00000258733 NPIPB7O75200 414 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 NMBRP28336 390 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 SNRPNP63162 240 aaKnown RBP6.71□□□□□ -1.34
GPNMB-201ENST00000258733 GUCA2AQ02747 115 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 ROM1Q03395 351 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 CLEC12AQ5QGZ9 265 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 BVES-AS1Q5T3Y7 98 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 TMEM184AQ6ZMB5 413 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 H2BFWTQ7Z2G1 175 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 PRRT2Q7Z6L0 340 aaPredicted RBP6.71□□□□□ -1.34
GPNMB-201ENST00000258733 TMPRSS11BQ86T26 416 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 ZIC4Q8N9L1 334 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 OR51A2Q8NGJ7 313 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 OR4A16Q8NH70 328 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 TIMP4Q99727 224 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 TBL1YQ9BQ87 522 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 DPY30Q9C005 99 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 ABT1Q9ULW3 272 aaKnown RBP6.71□□□□□ -1.34
GPNMB-201ENST00000258733 LAMP3Q9UQV4 416 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 VDAC3Q9Y277 283 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 SELENOKQ9Y6D0 94 aa6.71□□□□□ -1.34
GPNMB-201ENST00000258733 IGKV6D-41A0A0C4DH26 115 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 MUC21A0A0G2JKD1 596 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 MUC21A0A140T8X8 626 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 LRP5LA4QPB2 252 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 MEIS3P2A8K0S8 358 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 SFT2D2O95562 160 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 CYB5AP00167 134 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 ORM1P02763 201 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 ZNF728P0DKX0 622 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 IGFBP2P18065 325 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 CD34P28906 385 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 GRPRP30550 384 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 NTSP30990 170 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 BSGP35613 385 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 HLA-DRB3P79483 266 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 ADIRFQ15847 76 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 POM121L1PQ3SYA9 428 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 MUC21Q5SSG8 566 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 PWWP2BQ6NUJ5 590 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 OR6T1Q8NGN1 323 aa6.7□□□□□ -1.34
GPNMB-201ENST00000258733 EMG1Q92979 244 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms