RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 VAX1Q5SQQ9 334 aa16■□□□□ 0.15
TRIM47-201ENST00000254816 KCTD9Q7L273 389 aa16■□□□□ 0.15
TRIM47-201ENST00000254816 ZNF546Q86UE3 836 aa16■□□□□ 0.15
TRIM47-201ENST00000254816 OR5AP2Q8NGF4 316 aa16■□□□□ 0.15
TRIM47-201ENST00000254816 USB1Q9BQ65 265 aaKnown RBP16■□□□□ 0.15
TRIM47-201ENST00000254816 RDH8Q9NYR8 311 aa16■□□□□ 0.15
TRIM47-201ENST00000254816 EHFQ9NZC4 300 aa16■□□□□ 0.15
TRIM47-201ENST00000254816 ZSCAN5BA6NJL1 495 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 TEX46H3BTG2 121 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 SCO1O75880 301 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 ATXN7L3Q14CW9 347 aaPredicted RBP15.99■□□□□ 0.15
TRIM47-201ENST00000254816 ZMYND11Q15326 602 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 ACTBL2Q562R1 376 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 RDH5Q92781 318 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 RCC2Q9P258 522 aaKnown RBP15.99■□□□□ 0.15
TRIM47-201ENST00000254816 KIF25Q9UIL4 384 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 WNT9BO14905 357 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 B3GALNT1O75752 331 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 CD8AP01732 235 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 NPY4RP50391 375 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 ASCL1P50553 236 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 SPRNQ5BIV9 151 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 SLC22A25Q6T423 547 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 SUMF2Q8NBJ7 301 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 NEK7Q8TDX7 302 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 ASB13Q8WXK3 278 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 NRIP2Q9BQI9 281 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 PLK3Q9H4B4 646 aa15.99■□□□□ 0.15
TRIM47-201ENST00000254816 SNAPC5O75971 98 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 NXPH2O95156 264 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 NMBP08949 121 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 PTAFRP25105 342 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 GRNP28799 593 aaKnown RBP15.98■□□□□ 0.15
TRIM47-201ENST00000254816 TAS2R46P59540 309 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 ARPC4P59998 168 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 C5orf24Q7Z6I8 188 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 MITD1Q8WV92 249 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 POM121Q96HA1 1249 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 PHB2Q99623 299 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 WDR13Q9H1Z4 485 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 NARFLQ9H6Q4 476 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 TAAR3PQ9P1P4 343 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 ANXA10Q9UJ72 324 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 DIDO1Q9BTC0 2240 aaKnown RBP15.98■□□□□ 0.15
TRIM47-201ENST00000254816 TRAV24A0A0B4J272 114 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 ZNF44P15621 663 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 DTYMKP23919 212 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 ZNF660Q6AZW8 331 aaPredicted RBP15.98■□□□□ 0.15
TRIM47-201ENST00000254816 LRRC20Q8TCA0 184 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 SCARB1Q8WTV0 552 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 PPA2Q9H2U2 334 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 CHMP1AQ9HD42 196 aaPredicted RBP15.98■□□□□ 0.15
TRIM47-201ENST00000254816 C12orf4Q9NQ89 552 aa15.98■□□□□ 0.15
TRIM47-201ENST00000254816 IGLV3-9A0A075B6K5 115 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 SPRY3O43610 288 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 ZNF205O95201 554 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 PI3P19957 117 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 CHRNB4P30926 498 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 CEBPDP49716 269 aaPredicted RBP15.97■□□□□ 0.15
TRIM47-201ENST00000254816 BAMBIQ13145 260 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 IL13RA2Q14627 380 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 BEX5Q5H9J7 111 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 FAM209AQ5JX71 171 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 ADAM5Q6NVV9 412 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 Q6P435 159 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 WDR82Q6UXN9 313 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 OVCH2Q7RTZ1 564 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 PPP1R1CQ8WVI7 109 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 A0A1B0GWJ7 208 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 hCG_1807616A0A1W2PRN6 198 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 TUBAL3A6NHL2 446 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 SIRPB1O00241 398 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 DEGS1O15121 323 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 RLN2P04090 185 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 RPS23P62266 143 aaKnown RBP15.97■□□□□ 0.15
TRIM47-201ENST00000254816 LPCAT3Q6P1A2 487 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 LINC00596Q86U02 117 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 Q8IYB0 196 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 ARRDC1Q8N5I2 433 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 SPERTQ8NA61 448 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 TERB2Q8NHR7 220 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 RBPMSQ93062 196 aaKnown RBP15.97■□□□□ 0.15
TRIM47-201ENST00000254816 PRR13Q9NZ81 148 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 COQ3Q9NZJ6 369 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 COMMD9Q9P000 198 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 EDARQ9UNE0 448 aa15.97■□□□□ 0.15
TRIM47-201ENST00000254816 PRSS44E7EML9 344 aa15.96■□□□□ 0.15
TRIM47-201ENST00000254816 SHOXO15266 292 aa15.96■□□□□ 0.15
TRIM47-201ENST00000254816 POC1AQ8NBT0 407 aa15.96■□□□□ 0.15
TRIM47-201ENST00000254816 LINC01560Q8TB33 94 aa15.96■□□□□ 0.15
TRIM47-201ENST00000254816 MARVELD3Q96A59 401 aa15.96■□□□□ 0.15
TRIM47-201ENST00000254816 TLNRD1Q9H1K6 362 aa15.96■□□□□ 0.15
TRIM47-201ENST00000254816 C1orf123Q9NWV4 160 aa15.96■□□□□ 0.15
TRIM47-201ENST00000254816 OR14J1Q9UGF5 321 aa15.96■□□□□ 0.15
TRIM47-201ENST00000254816 ATP23Q9Y6H3 246 aa15.96■□□□□ 0.15
TRIM47-201ENST00000254816 TFF1P04155 84 aa15.96■□□□□ 0.14
TRIM47-201ENST00000254816 PMELP40967 661 aa15.96■□□□□ 0.14
TRIM47-201ENST00000254816 SRSF4Q08170 494 aaKnown RBP15.96■□□□□ 0.14
TRIM47-201ENST00000254816 FGL1Q08830 312 aa15.96■□□□□ 0.14
TRIM47-201ENST00000254816 C11orf87Q6NUJ2 197 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms