RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SPRR3Q9UBC9 169 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 TMED3Q9Y3Q3 217 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 IGKV1D-13A0A0B4J2D9 117 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 PRSS44E7EML9 344 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 ST8SIA3O43173 380 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 TK1P04183 234 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 GLAP06280 429 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 IGKV1-13P0DP09 117 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 APLNRP35414 380 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 CLN3Q13286 438 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 TMEM88Q6PEY1 159 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 C20orf204Q6ZNR8 217 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 CLRN3Q8NCR9 226 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 NRIP2Q9BQI9 281 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 ARV1Q9H2C2 271 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 RCL1Q9Y2P8 373 aaKnown RBP16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 PCNX2A6NKB5 2137 aa16.69■□□□□ 0.26
CDC42EP1-201ENST00000249014 MED12LQ86YW9 2145 aa16.69■□□□□ 0.26
CDC42EP1-201ENST00000249014 NKX2-6A6NCS4 301 aa16.69■□□□□ 0.26
CDC42EP1-201ENST00000249014 AGPAT2O15120 278 aa16.69■□□□□ 0.26
CDC42EP1-201ENST00000249014 GPR137BO60478 399 aa16.69■□□□□ 0.26
CDC42EP1-201ENST00000249014 CD46P15529 392 aa16.69■□□□□ 0.26
CDC42EP1-201ENST00000249014 SPIN3Q5JUX0 258 aa16.69■□□□□ 0.26
CDC42EP1-201ENST00000249014 Q6ZRG5 221 aa16.69■□□□□ 0.26
CDC42EP1-201ENST00000249014 VASH2Q86V25 355 aa16.69■□□□□ 0.26
CDC42EP1-201ENST00000249014 BCL2L2Q92843 193 aaPredicted RBP16.69■□□□□ 0.26
CDC42EP1-201ENST00000249014 PARP12Q9H0J9 701 aaKnown RBP16.69■□□□□ 0.26
CDC42EP1-201ENST00000249014 OPA3Q9H6K4 179 aa16.69■□□□□ 0.26
CDC42EP1-201ENST00000249014 PARP11Q9NR21 331 aa16.69■□□□□ 0.26
CDC42EP1-201ENST00000249014 LHX6Q9UPM6 363 aa16.69■□□□□ 0.26
CDC42EP1-201ENST00000249014 SLC22A20A6NK97 555 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 ANKRD30BLA7E2S9 258 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 TPD52L2O43399 206 aaKnown RBP16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 P2RY1P47900 373 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 NHLH2Q02577 135 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 IL13RA2Q14627 380 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 FBXW9Q5XUX1 488 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 MDP1Q86V88 176 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 FAM185AQ8N0U4 392 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 GAPTQ8N292 157 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 C17orf78Q8N4C9 275 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 SUMF2Q8NBJ7 301 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 SEC11CQ9BY50 192 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 PURGQ9UJV8 347 aaKnown RBP16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 ATP23Q9Y6H3 246 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 ARGFXA6NJG6 315 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 TRDCB7Z8K6 153 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 TUSC2O75896 110 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 SPATA46Q5T0L3 261 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 GPR157Q5UAW9 335 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 OR2T2Q6IF00 324 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 POMT1Q9Y6A1 747 aa16.68■□□□□ 0.26
CDC42EP1-201ENST00000249014 ATP6V1G2-DDX39BF2Z307 99 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 HS3ST1O14792 307 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 MRPL30Q8TCC3 161 aaKnown RBP16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 TMEM56Q96MV1 263 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 ZFP57Q9NU63 452 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 UBE2J1Q9Y385 318 aaPredicted RBP16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 MPC1Q9Y5U8 109 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 TMEM56-RWDD3S4R434 201 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 TRGV5A0A0B4J1U4 118 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 TRAV24A0A0B4J272 114 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 RNASEK-C17orf49H0YIS7 233 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 RHBDL1O75783 438 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 OR8U9P0C7N5 309 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 CA6P23280 308 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 IL32P24001 234 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 F2RL1P55085 397 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 RND3P61587 244 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 TMPRSS7Q7RTY8 843 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 MYPOPQ86VE0 399 aaPredicted RBP16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 ZNF565Q8N9K5 539 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 OR8U1Q8NH10 309 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 LYPD6BQ8NI32 183 aa16.67■□□□□ 0.26
CDC42EP1-201ENST00000249014 KIR2DS1A0A191URI9 304 aa16.66■□□□□ 0.26
CDC42EP1-201ENST00000249014 C9JQL5 133 aa16.66■□□□□ 0.26
CDC42EP1-201ENST00000249014 CD5P06127 495 aa16.66■□□□□ 0.26
CDC42EP1-201ENST00000249014 KIR2DS4P43632 304 aa16.66■□□□□ 0.26
CDC42EP1-201ENST00000249014 NPBWR1P48145 328 aa16.66■□□□□ 0.26
CDC42EP1-201ENST00000249014 GNG3P63215 75 aa16.66■□□□□ 0.26
CDC42EP1-201ENST00000249014 ARG2P78540 354 aa16.66■□□□□ 0.26
CDC42EP1-201ENST00000249014 KIR2DS1Q14954 304 aa16.66■□□□□ 0.26
CDC42EP1-201ENST00000249014 ZNF766Q5HY98 468 aa16.66■□□□□ 0.26
CDC42EP1-201ENST00000249014 ZNF573Q86YE8 665 aa16.66■□□□□ 0.26
CDC42EP1-201ENST00000249014 CBLN2Q8IUK8 224 aa16.66■□□□□ 0.26
CDC42EP1-201ENST00000249014 SELENOHQ8IZQ5 122 aaKnown RBP16.66■□□□□ 0.26
CDC42EP1-201ENST00000249014 LILRB1Q8NHL6 650 aaPredicted RBP16.66■□□□□ 0.26
CDC42EP1-201ENST00000249014 RDH5Q92781 318 aa16.66■□□□□ 0.26
CDC42EP1-201ENST00000249014 C11orf1Q9H5F2 150 aa16.66■□□□□ 0.26
CDC42EP1-201ENST00000249014 GP6Q9HCN6 339 aa16.66■□□□□ 0.26
CDC42EP1-201ENST00000249014 CCL28Q9NRJ3 127 aa16.66■□□□□ 0.26
CDC42EP1-201ENST00000249014 LOC400499M0QZD8 3231 aa16.66■□□□□ 0.26
CDC42EP1-201ENST00000249014 OR5B21A6NL26 309 aa16.65■□□□□ 0.26
CDC42EP1-201ENST00000249014 HSD17B6O14756 317 aa16.65■□□□□ 0.26
CDC42EP1-201ENST00000249014 CDS2O95674 445 aa16.65■□□□□ 0.26
CDC42EP1-201ENST00000249014 CTRB1P17538 263 aa16.65■□□□□ 0.26
CDC42EP1-201ENST00000249014 SRPXP78539 464 aa16.65■□□□□ 0.26
CDC42EP1-201ENST00000249014 CTRB2Q6GPI1 263 aa16.65■□□□□ 0.26
CDC42EP1-201ENST00000249014 PCSK4Q6UW60 755 aa16.65■□□□□ 0.26
CDC42EP1-201ENST00000249014 ZNF695Q8IW36 515 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms