RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 CLEC18CQ8NCF0 446 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 MRGPRFQ96AM1 343 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 NRIP2Q9BQI9 281 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 PLEKHA3Q9HB20 300 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 PCNX2A6NKB5 2137 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 LOC105371267A0A1B0GV96 52 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 SLC22A20A6NK97 555 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 NPIPB7O75200 414 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 FBP1P09467 338 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 SRPXP78539 464 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 ZNF528Q3MIS6 628 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 GLRX5Q86SX6 157 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 OR4F5Q8NH21 305 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 ADGRG7Q96K78 797 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 OR4F4Q96R69 305 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 GPR35Q9HC97 309 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 NDRG3Q9UGV2 375 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 SYNGR1O43759 233 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 AGFG2O95081 481 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 MBPP02686 304 aaPredicted RBP11.91□□□□□ -0.5
NCLN-201ENST00000246117 CTSDP07339 412 aaPredicted RBP11.91□□□□□ -0.5
NCLN-201ENST00000246117 SNRPCP09234 159 aaKnown RBP11.91□□□□□ -0.5
NCLN-201ENST00000246117 PPP1CCP36873 323 aaKnown RBP11.91□□□□□ -0.5
NCLN-201ENST00000246117 ZP4Q12836 540 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 SSX2Q16385 188 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 SLC25A22Q9H936 323 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 UCK1Q9HA47 277 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 MSL2Q9HCI7 577 aa11.91□□□□□ -0.5
NCLN-201ENST00000246117 MPPED1O15442 326 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 ECI1P42126 302 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 CEBPDP49716 269 aaPredicted RBP11.9□□□□□ -0.5
NCLN-201ENST00000246117 DVL1P1P54792 670 aaPredicted RBP11.9□□□□□ -0.5
NCLN-201ENST00000246117 LIAT1Q6ZQX7 453 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 ZNF573Q86YE8 665 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 FAM185AQ8N0U4 392 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 FAM58AQ8N1B3 248 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 MRGPRDQ8TDS7 321 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 APOBEC3DQ96AK3 386 aaPredicted RBP11.9□□□□□ -0.5
NCLN-201ENST00000246117 PHYHIPLQ96FC7 376 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 GDF15Q99988 308 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 FRMPD3Q5JV73 1810 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 AQP7O14520 342 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 PPP1R2P9O14990 202 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 CLPSP04118 112 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 FGF2P09038 288 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 OR3A1P47881 315 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 H2BFWTQ7Z2G1 175 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 KCNE4Q8WWG9 221 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 NCOA6Q14686 2063 aaPredicted RBP11.9□□□□□ -0.5
NCLN-201ENST00000246117 A0A0A6YYD4 124 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 GABRA4P48169 554 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 MSMO1Q15800 293 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 CLDN23Q96B33 292 aa11.9□□□□□ -0.5
NCLN-201ENST00000246117 RCC2Q9P258 522 aaKnown RBP11.9□□□□□ -0.5
NCLN-201ENST00000246117 RAB19A4D1S5 217 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 HEXAP06865 529 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 MEOX1P50221 254 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 PRAMEF5Q5TYX0 476 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 PRAMEF6Q5VXH4 476 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 FDX2Q6P4F2 183 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 SMIM7Q9BQ49 75 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 ARV1Q9H2C2 271 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 RFNGQ9Y644 331 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 CATR1Q13166 79 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 FAHD2BQ6P2I3 314 aaPredicted RBP11.89□□□□□ -0.51
NCLN-201ENST00000246117 SLC23A3Q6PIS1 610 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 IL34Q6ZMJ4 242 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 ZNF429Q86V71 674 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 CALHM1Q8IU99 346 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 WDFY1Q8IWB7 410 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 FAHD2AQ96GK7 314 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 IP6K3Q96PC2 410 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 RTL8AQ9BWD3 113 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 ATP6V0CP27449 155 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 MRPL41Q8IXM3 137 aaKnown RBP11.89□□□□□ -0.51
NCLN-201ENST00000246117 SAP25Q8TEE9 199 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 FER1L6-AS2Q96M78 137 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 CABLES2Q9BTV7 478 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 RSG1Q9BU20 258 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 NPTNQ9Y639 398 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 MFNGO00587 321 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 GNG3P63215 75 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 EWSR1Q01844 656 aaKnown RBP eCLIP11.89□□□□□ -0.512e-6■■■■■ 27
NCLN-201ENST00000246117 PCOLCEQ15113 449 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 OR8B8Q15620 311 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 ZNF826PQ6ZT77 177 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 OVCH2Q7RTZ1 564 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 LRP11Q86VZ4 500 aa11.89□□□□□ -0.51
NCLN-201ENST00000246117 SPINK4O60575 86 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 CD74P04233 296 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 ZNF735P0CB33 412 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 SLC25A4P12235 298 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 FAM27BQ5VT28 67 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 UBAC2Q8NBM4 344 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 RARRES2Q99969 163 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 PATZ1Q9HBE1 687 aaKnown RBP11.88□□□□□ -0.51
NCLN-201ENST00000246117 CHCHD2Q9Y6H1 151 aaPredicted RBP11.88□□□□□ -0.51
NCLN-201ENST00000246117 TRGV5A0A0B4J1U4 118 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 IGHEP01854 428 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 HBE1P02100 147 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms