RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 DCAF12Q5T6F0 453 aa17.27■□□□□ 0.35
HOXC13-201ENST00000243056 FAM90A2PQ658T7 463 aa17.27■□□□□ 0.35
HOXC13-201ENST00000243056 MRPL14Q6P1L8 145 aaKnown RBP17.27■□□□□ 0.35
HOXC13-201ENST00000243056 GATSQ8NAP1 163 aa17.27■□□□□ 0.35
HOXC13-201ENST00000243056 GPR119Q8TDV5 335 aa17.27■□□□□ 0.35
HOXC13-201ENST00000243056 AK3Q9UIJ7 227 aa17.27■□□□□ 0.35
HOXC13-201ENST00000243056 PTRH2Q9Y3E5 179 aaKnown RBP17.27■□□□□ 0.35
HOXC13-201ENST00000243056 BLACEA4D250 179 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 FSTP19883 344 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 TAF9Q16594 264 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 ATP6V1FQ16864 119 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 CDCP2Q5VXM1 449 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 OR8G2PQ6IF36 304 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 SMIM15Q7Z3B0 74 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 P4HA3Q7Z4N8 544 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 LYPD6Q86Y78 171 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 OR14L1PQ8NHC6 308 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 CLDND2Q8NHS1 167 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 TMEM170AQ8WVE7 144 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 SLC35E1Q96K37 410 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 ZNF2Q9BSG1 426 aaPredicted RBP17.26■□□□□ 0.35
HOXC13-201ENST00000243056 LAMP3Q9UQV4 416 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 RNF115Q9Y4L5 304 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 DMXL2Q8TDJ6 3036 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 BOD1L1Q8NFC6 3051 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 VSTM2BA6NLU5 285 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 E5RGE8 158 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 LMX1BO60663 402 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 KLF7O75840 302 aaPredicted RBP17.26■□□□□ 0.35
HOXC13-201ENST00000243056 GZMHP20718 246 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 BCORP1Q8N888 145 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 TMEM37Q8WXS4 190 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 STRADBQ9C0K7 418 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 NSG2Q9Y328 171 aa17.26■□□□□ 0.35
HOXC13-201ENST00000243056 FIGNL2A6NMB9 653 aa17.25■□□□□ 0.35
HOXC13-201ENST00000243056 TNFSF13O75888 250 aa17.25■□□□□ 0.35
HOXC13-201ENST00000243056 KNG1P01042 644 aa17.25■□□□□ 0.35
HOXC13-201ENST00000243056 FTH1P19P0C7X4 201 aa17.25■□□□□ 0.35
HOXC13-201ENST00000243056 MEP1BQ16820 701 aa17.25■□□□□ 0.35
HOXC13-201ENST00000243056 LINC00114Q6XXX2 140 aa17.25■□□□□ 0.35
HOXC13-201ENST00000243056 LHFPL1Q86WI0 220 aa17.25■□□□□ 0.35
HOXC13-201ENST00000243056 CMTM1Q8IZ96 169 aa17.25■□□□□ 0.35
HOXC13-201ENST00000243056 OR8G5Q8NG78 346 aa17.25■□□□□ 0.35
HOXC13-201ENST00000243056 OR2G3Q8NGZ4 309 aa17.25■□□□□ 0.35
HOXC13-201ENST00000243056 LMF2Q9BU23 707 aaKnown RBP17.25■□□□□ 0.35
HOXC13-201ENST00000243056 P4HTMQ9NXG6 502 aa17.25■□□□□ 0.35
HOXC13-201ENST00000243056 TUBG1P23258 451 aa17.25■□□□□ 0.35
HOXC13-201ENST00000243056 ACAA2P42765 397 aaKnown RBP17.25■□□□□ 0.35
HOXC13-201ENST00000243056 FDX2Q6P4F2 183 aa17.25■□□□□ 0.35
HOXC13-201ENST00000243056 GCNT2Q8N0V5 402 aa17.25■□□□□ 0.35
HOXC13-201ENST00000243056 KTI12Q96EK9 354 aaPredicted RBP17.25■□□□□ 0.35
HOXC13-201ENST00000243056 NICN1Q9BSH3 213 aa17.25■□□□□ 0.35
HOXC13-201ENST00000243056 CNTD2Q9H8S5 307 aa17.25■□□□□ 0.35
HOXC13-201ENST00000243056 C1orf123Q9NWV4 160 aa17.25■□□□□ 0.35
HOXC13-201ENST00000243056 TMEM238C9JI98 176 aa17.24■□□□□ 0.35
HOXC13-201ENST00000243056 SDCBPO00560 298 aaPredicted RBP17.24■□□□□ 0.35
HOXC13-201ENST00000243056 NECAP1Q8NC96 275 aa17.24■□□□□ 0.35
HOXC13-201ENST00000243056 ADOQ96SZ5 270 aa17.24■□□□□ 0.35
HOXC13-201ENST00000243056 PYGO2Q9BRQ0 406 aa17.24■□□□□ 0.35
HOXC13-201ENST00000243056 HSBP1L1C9JCN9 74 aa17.23■□□□□ 0.35
HOXC13-201ENST00000243056 ERVS71-1P61550 626 aa17.23■□□□□ 0.35
HOXC13-201ENST00000243056 RPL23AP62750 156 aaKnown RBP17.23■□□□□ 0.35
HOXC13-201ENST00000243056 SLC17A1Q14916 467 aa17.23■□□□□ 0.35
HOXC13-201ENST00000243056 STPG4Q8N801 248 aa17.23■□□□□ 0.35
HOXC13-201ENST00000243056 DAZLQ92904 295 aaKnown RBP17.23■□□□□ 0.35
HOXC13-201ENST00000243056 ADIPOR1Q96A54 375 aa17.23■□□□□ 0.35
HOXC13-201ENST00000243056 KLHDC3Q9BQ90 382 aa17.23■□□□□ 0.35
HOXC13-201ENST00000243056 SEPSECSQ9HD40 501 aaKnown RBP17.23■□□□□ 0.35
HOXC13-201ENST00000243056 FUT9Q9Y231 359 aa17.23■□□□□ 0.35
HOXC13-201ENST00000243056 M0QZ24 198 aa17.23■□□□□ 0.35
HOXC13-201ENST00000243056 SCDO00767 359 aa17.23■□□□□ 0.35
HOXC13-201ENST00000243056 TCN2P20062 427 aa17.23■□□□□ 0.35
HOXC13-201ENST00000243056 CD33P20138 364 aa17.23■□□□□ 0.35
HOXC13-201ENST00000243056 RBMXP38159 391 aaKnown RBP17.23■□□□□ 0.35
HOXC13-201ENST00000243056 RAB11AP62491 216 aa17.23■□□□□ 0.35
HOXC13-201ENST00000243056 HOXB13Q92826 284 aaPredicted RBP17.23■□□□□ 0.35
HOXC13-201ENST00000243056 RTN4RQ9BZR6 473 aa17.23■□□□□ 0.35
HOXC13-201ENST00000243056 PLSCR2Q9NRY7 297 aa17.23■□□□□ 0.35
HOXC13-201ENST00000243056 ANAPC10Q9UM13 185 aa17.23■□□□□ 0.35
HOXC13-201ENST00000243056 RPH3ALQ9UNE2 315 aa17.23■□□□□ 0.35
HOXC13-201ENST00000243056 B9D1Q9UPM9 204 aa17.23■□□□□ 0.35
HOXC13-201ENST00000243056 PRRC2CQ9Y520 2896 aaKnown RBP17.23■□□□□ 0.35
HOXC13-201ENST00000243056 PFN1P07737 140 aaKnown RBP17.22■□□□□ 0.35
HOXC13-201ENST00000243056 VSIG8P0DPA2 414 aa17.22■□□□□ 0.35
HOXC13-201ENST00000243056 ATP6V0CP27449 155 aa17.22■□□□□ 0.35
HOXC13-201ENST00000243056 RPS4XP62701 263 aaKnown RBP17.22■□□□□ 0.35
HOXC13-201ENST00000243056 QRFPP83859 136 aa17.22■□□□□ 0.35
HOXC13-201ENST00000243056 ZNF117Q03924 483 aa17.22■□□□□ 0.35
HOXC13-201ENST00000243056 OR5L2Q8NGL0 311 aa17.22■□□□□ 0.35
HOXC13-201ENST00000243056 ORAOV1Q8WV07 137 aa17.22■□□□□ 0.35
HOXC13-201ENST00000243056 A0A0U1RQV5 110 aa17.22■□□□□ 0.35
HOXC13-201ENST00000243056 TNFSF15O95150 251 aa17.22■□□□□ 0.35
HOXC13-201ENST00000243056 DNASE1L1P49184 302 aa17.22■□□□□ 0.35
HOXC13-201ENST00000243056 PNRC1Q12796 327 aaPredicted RBP17.22■□□□□ 0.35
HOXC13-201ENST00000243056 TMEM241Q24JQ0 296 aa17.22■□□□□ 0.35
HOXC13-201ENST00000243056 TOMM20LQ6UXN7 152 aa17.22■□□□□ 0.35
HOXC13-201ENST00000243056 TMEM123Q8N131 208 aa17.22■□□□□ 0.35
HOXC13-201ENST00000243056 ZCCHC14Q8WYQ9 949 aaKnown RBP17.22■□□□□ 0.35
HOXC13-201ENST00000243056 FOXN4Q96NZ1 517 aa17.22■□□□□ 0.35
HOXC13-201ENST00000243056 OR8B4Q96RC9 309 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms