RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 IAH1Q2TAA2 248 aaPredicted RBP7.39□□□□□ -1.23
VPS4B-201ENST00000238497 IGSF11Q5DX21 431 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 MDP1Q86V88 176 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 MKXQ8IYA7 352 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 OR10AD1Q8NGE0 317 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 MED30Q96HR3 178 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 HEXA-AS1Q9H8Q6 139 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 FN3KRPQ9HA64 309 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 CDH20Q9HBT6 801 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 NGBQ9NPG2 151 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 ANKRD30BLA7E2S9 258 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 LEUTXA8MZ59 168 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 MFNGO00587 321 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 XRCC2O43543 280 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 PLAUP00749 431 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 TFF1P04155 84 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 PIGPP57054 158 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 LY6G6FQ5SQ64 297 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 BHLHA15Q7RTS1 189 aaPredicted RBP7.38□□□□□ -1.23
VPS4B-201ENST00000238497 CDH26Q8IXH8 852 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 OR5AP2Q8NGF4 316 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 CCL19Q99731 98 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 OBP2BQ9NPH6 170 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 PFDN2Q9UHV9 154 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 NIPBLQ6KC79 2804 aaeCLIP7.38□□□□□ -1.23
VPS4B-201ENST00000238497 SIRPB1O00241 398 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 TSPAN4O14817 238 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 APOC3P02656 99 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 CRYGSP22914 178 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 OMGP23515 440 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 DEFA5Q01523 94 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 ANKRD55Q3KP44 614 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 TMEM128Q5BJH2 165 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 ADAM5Q6NVV9 412 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 OR2W3Q7Z3T1 314 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 SLC25A42Q86VD7 318 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 MYPOPQ86VE0 399 aaPredicted RBP7.38□□□□□ -1.23
VPS4B-201ENST00000238497 SGPP2Q8IWX5 399 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 MRGPRFQ96AM1 343 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 OR2J1Q9GZK6 312 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 BCO1Q9HAY6 547 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 TAS2R3Q9NYW6 316 aa7.38□□□□□ -1.23
VPS4B-201ENST00000238497 HSD17B6O14756 317 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 PHF1O43189 567 aaPredicted RBP7.37□□□□□ -1.23
VPS4B-201ENST00000238497 SMPD2O60906 423 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 TMEM127O75204 238 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 EPHA1P21709 976 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 ZBTB25P24278 435 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 GLP1RP43220 463 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 FUT6P51993 359 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 TAS2R46P59540 309 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 RAB32Q13637 225 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 TOR2AQ5JU69 321 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 Q71RC1 249 aaPredicted RBP7.37□□□□□ -1.23
VPS4B-201ENST00000238497 SLC30A7Q8NEW0 376 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 OR5M8Q8NGP6 311 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 ANGPTL6Q8NI99 470 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 EMG1Q92979 244 aaKnown RBP7.37□□□□□ -1.23
VPS4B-201ENST00000238497 B3GNT2Q9NY97 397 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 LAMP3Q9UQV4 416 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 CD300LBA8K4G0 201 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 DEFB108AA8MXU0 73 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 SIAH2O43255 324 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 CNOT4O95628 575 aaKnown RBP7.37□□□□□ -1.23
VPS4B-201ENST00000238497 CD74P04233 296 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 ZNF728P0DKX0 622 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 GNRHRP30968 328 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 ZNF83P51522 516 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 FAM189A2Q15884 450 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 ESCO2Q56NI9 601 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 SIGIRRQ6IA17 410 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 C11orf87Q6NUJ2 197 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 LHFPL2Q6ZUX7 228 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 RFPL4BQ6ZWI9 263 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 TMED6Q8WW62 240 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 SPSB1Q96BD6 273 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 CPNE2Q96FN4 548 aaPredicted RBP7.37□□□□□ -1.23
VPS4B-201ENST00000238497 OR10C1Q96KK4 312 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 PLEKHF2Q9H8W4 249 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 KCNIP3Q9Y2W7 256 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 V9GYS6 101 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 H3BUI4 141 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 OR2A4O95047 310 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 IFNA21P01568 189 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 IGHV3-13P01766 116 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 IGHV3-7P01780 117 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 CD3EP07766 207 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 CD99P14209 185 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 PSMB6P28072 239 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 NKX6-1P78426 367 aaPredicted RBP7.37□□□□□ -1.23
VPS4B-201ENST00000238497 P2RY6Q15077 328 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 DEFB113Q30KQ7 82 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 ABLIM2Q6H8Q1 611 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 LYPD6Q86Y78 171 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 ZDHHC23Q8IYP9 409 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 ZNF565Q8N9K5 539 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 TMEM171Q8WVE6 324 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 PTX4Q96A99 478 aa7.37□□□□□ -1.23
VPS4B-201ENST00000238497 MARS2Q96GW9 593 aaKnown RBP7.37□□□□□ -1.23
VPS4B-201ENST00000238497 OR2A7Q96R45 310 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms