RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 VDAC3Q9Y277 283 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 HIDE1A8MVS5 230 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 GALR2O43603 387 aaPredicted RBP11.29□□□□□ -0.6
MSH2-201ENST00000233146 ZNF93P35789 620 aaPredicted RBP11.29□□□□□ -0.6
MSH2-201ENST00000233146 LHX2P50458 406 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 YPEL3P61236 119 aaPredicted RBP11.29□□□□□ -0.6
MSH2-201ENST00000233146 GLIPR1L1Q6UWM5 242 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 CADM4Q8NFZ8 388 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 KCNG3Q8TAE7 436 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 MRPL13Q9BYD1 178 aaKnown RBP11.29□□□□□ -0.6
MSH2-201ENST00000233146 BANF2Q9H503 90 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 RYDENQ9NUL5 291 aaKnown RBP11.29□□□□□ -0.6
MSH2-201ENST00000233146 CLEC5AQ9NY25 188 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 B4DGG1 531 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 P2RY10O00398 339 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 HS3ST1O14792 307 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 HMGA1P17096 107 aaKnown RBP11.29□□□□□ -0.6
MSH2-201ENST00000233146 ARG2P78540 354 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 ZNF468Q5VIY5 522 aaPredicted RBP11.29□□□□□ -0.6
MSH2-201ENST00000233146 ZIC4Q8N9L1 334 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 THAP10Q9P2Z0 257 aaPredicted RBP11.29□□□□□ -0.6
MSH2-201ENST00000233146 SCN3AQ9NY46 2000 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 LOC101059948A0A1B0GTJ6 334 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 LINC01553A4QN01 128 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 SH2D1BO14796 132 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 SAP30O75446 220 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 ONECUT2O95948 504 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 CSTAP01040 98 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 SELPP16109 830 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 KRTDAPP60985 99 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 FAM78BQ5VT40 261 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 Q6ZNB5 142 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 CPEB2Q7Z5Q1 589 aaKnown RBP11.28□□□□□ -0.6
MSH2-201ENST00000233146 TCTEX1D1Q8N7M0 179 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 OR4F17Q8NGA8 305 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 DAZLQ92904 295 aaKnown RBP11.28□□□□□ -0.6
MSH2-201ENST00000233146 ADAT3Q96EY9 351 aaPredicted RBP11.28□□□□□ -0.6
MSH2-201ENST00000233146 OR4F4Q96R69 305 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 PLA2G3Q9NZ20 509 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 IGKV1D-8A0A087WSZ0 117 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 CST7O76096 145 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 WNT2P09544 360 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 ASAH2BP0C7U1 165 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 RPS12P25398 132 aaKnown RBP11.28□□□□□ -0.6
MSH2-201ENST00000233146 RPL18Q07020 188 aaKnown RBP11.28□□□□□ -0.6
MSH2-201ENST00000233146 FAM53BQ14153 422 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 PDE4DIPQ5VU43 2346 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 FAM71F2Q6NXP2 309 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 ERN2Q76MJ5 926 aaKnown RBP11.28□□□□□ -0.6
MSH2-201ENST00000233146 ERASQ7Z444 233 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 MUC15Q8N387 334 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 TMEM59Q9BXS4 323 aa11.28□□□□□ -0.6
MSH2-201ENST00000233146 TAX1BP3O14907 124 aa11.27□□□□□ -0.6
MSH2-201ENST00000233146 TOX4O94842 621 aa11.27□□□□□ -0.6
MSH2-201ENST00000233146 IFNA1P01562 189 aa11.27□□□□□ -0.6
MSH2-201ENST00000233146 GNRHRP30968 328 aa11.27□□□□□ -0.6
MSH2-201ENST00000233146 GABRA2P47869 451 aa11.27□□□□□ -0.6
MSH2-201ENST00000233146 ACSF3Q4G176 576 aaPredicted RBP11.27□□□□□ -0.6
MSH2-201ENST00000233146 FAM89BQ8N5H3 189 aa11.27□□□□□ -0.6
MSH2-201ENST00000233146 VN1R2Q8NFZ6 395 aa11.27□□□□□ -0.6
MSH2-201ENST00000233146 SAMD10Q9BYL1 202 aa11.27□□□□□ -0.6
MSH2-201ENST00000233146 A0A1W2PP11 408 aa11.27□□□□□ -0.61
MSH2-201ENST00000233146 G3V4G9 280 aa11.27□□□□□ -0.61
MSH2-201ENST00000233146 TMEM250H0YL14 139 aa11.27□□□□□ -0.61
MSH2-201ENST00000233146 GYPAP02724 150 aa11.27□□□□□ -0.61
MSH2-201ENST00000233146 MRPS34P82930 218 aaKnown RBP11.27□□□□□ -0.61
MSH2-201ENST00000233146 BAXQ07812 192 aa11.27□□□□□ -0.61
MSH2-201ENST00000233146 OR2A1Q8NGT9 310 aa11.27□□□□□ -0.61
MSH2-201ENST00000233146 OR52N5Q8NH56 324 aa11.27□□□□□ -0.61
MSH2-201ENST00000233146 RTN4IP1Q8WWV3 396 aaPredicted RBP11.27□□□□□ -0.61
MSH2-201ENST00000233146 ATP5SQ99766 215 aa11.27□□□□□ -0.61
MSH2-201ENST00000233146 RBM24Q9BX46 236 aaKnown RBP11.27□□□□□ -0.61
MSH2-201ENST00000233146 ZNF586Q9NXT0 402 aa11.27□□□□□ -0.61
MSH2-201ENST00000233146 ODAMA1E959 279 aa11.27□□□□□ -0.61
MSH2-201ENST00000233146 SERPINE3A8MV23 424 aa11.27□□□□□ -0.61
MSH2-201ENST00000233146 GRXCR1A8MXD5 290 aa11.27□□□□□ -0.61
MSH2-201ENST00000233146 CPMP14384 443 aa11.27□□□□□ -0.61
MSH2-201ENST00000233146 GLB1P16278 677 aa11.27□□□□□ -0.61
MSH2-201ENST00000233146 SLC6A8P48029 635 aa11.27□□□□□ -0.61
MSH2-201ENST00000233146 MEF2BQ02080 365 aaPredicted RBP11.27□□□□□ -0.61
MSH2-201ENST00000233146 PAX2Q02962 417 aa11.27□□□□□ -0.61
MSH2-201ENST00000233146 EXT1Q16394 746 aa11.27□□□□□ -0.61
MSH2-201ENST00000233146 MMP25Q9NPA2 562 aa11.27□□□□□ -0.61
MSH2-201ENST00000233146 CXorf51AA0A1B0GTR3 108 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 K7ESM1 405 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 RAMP3O60896 148 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 TNFSF15O95150 251 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 GPX1P07203 203 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 SRPXP78539 464 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 FOXL1Q12952 345 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 TSPO2Q5TGU0 170 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 SAMD13Q5VXD3 122 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 TMEM186Q96B77 213 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 LRRC3BQ96PB8 259 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 LIME1Q9H400 295 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 IGLON5A6NGN9 336 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 NPIPB7O75200 414 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 ZNF737O75373 536 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 GOSR1O95249 250 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 CRISP2P16562 243 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms