RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 RND3P61587 244 aa13.98□□□□□ -0.17
LTBR-201ENST00000228918 FOXO1Q12778 655 aa13.98□□□□□ -0.17
LTBR-201ENST00000228918 PRDX4Q13162 271 aa13.98□□□□□ -0.17
LTBR-201ENST00000228918 SRSF7Q16629 238 aaKnown RBP eCLIP13.98□□□□□ -0.17
LTBR-201ENST00000228918 TMEM182Q6ZP80 229 aaPredicted RBP13.98□□□□□ -0.17
LTBR-201ENST00000228918 SLAMF9Q96A28 289 aa13.98□□□□□ -0.17
LTBR-201ENST00000228918 Q9N2K0 584 aa13.98□□□□□ -0.17
LTBR-201ENST00000228918 CRIM1Q9NZV1 1036 aa13.98□□□□□ -0.17
LTBR-201ENST00000228918 FREM1Q5H8C1 2179 aa13.98□□□□□ -0.17
LTBR-201ENST00000228918 TNRC6AQ8NDV7 1962 aaKnown RBP13.98□□□□□ -0.17
LTBR-201ENST00000228918 TRIOBPQ9H2D6 2365 aa13.98□□□□□ -0.17
LTBR-201ENST00000228918 IGKV3D-15A0A087WSY6 115 aa13.98□□□□□ -0.17
LTBR-201ENST00000228918 C7orf77A4D0Y5 90 aa13.98□□□□□ -0.17
LTBR-201ENST00000228918 NAPSAO96009 420 aa13.98□□□□□ -0.17
LTBR-201ENST00000228918 C5orf24Q7Z6I8 188 aa13.98□□□□□ -0.17
LTBR-201ENST00000228918 REPIN1Q9BWE0 567 aaKnown RBP13.98□□□□□ -0.17
LTBR-201ENST00000228918 IGSF23A1L1A6 192 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 FAM24AA6NFZ4 105 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 MRPL33O75394 65 aaKnown RBP13.97□□□□□ -0.17
LTBR-201ENST00000228918 F10P00742 488 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 SERPINA7P05543 415 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 SNRNP70P08621 437 aaKnown RBP13.97□□□□□ -0.17
LTBR-201ENST00000228918 NKX2-1P43699 371 aaPredicted RBP13.97□□□□□ -0.17
LTBR-201ENST00000228918 ASCL1P50553 236 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 FGF12P61328 243 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 ARF1P84077 181 aaKnown RBP13.97□□□□□ -0.17
LTBR-201ENST00000228918 DBX2Q6ZNG2 339 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 UBALD2Q8IYN6 164 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 SAXO1Q8IYX7 474 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 ZNF561Q8N587 486 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 CT55Q8WUE5 264 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 SPIN2AQ99865 258 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 SPIN2BQ9BPZ2 258 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 LINC00470Q9BZP3 86 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 PRO3102Q9H379 93 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 UBE2J1Q9Y385 318 aaPredicted RBP13.97□□□□□ -0.17
LTBR-201ENST00000228918 PITX3O75364 302 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 TK1P04183 234 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 FBP1P09467 338 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 PPP1CCP36873 323 aaKnown RBP13.97□□□□□ -0.17
LTBR-201ENST00000228918 DCAF12Q5T6F0 453 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 ZNF818PQ6ZRF7 136 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 ZNF695Q8IW36 515 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 SELENOHQ8IZQ5 122 aaKnown RBP13.97□□□□□ -0.17
LTBR-201ENST00000228918 SUMF1Q8NBK3 374 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 LFNGQ8NES3 379 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 FAM213BQ8TBF2 198 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 IP6K3Q96PC2 410 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 HS3ST6Q96QI5 342 aa13.97□□□□□ -0.17
LTBR-201ENST00000228918 TRBV23-1A0A0A0MS06 115 aa13.96□□□□□ -0.17
LTBR-201ENST00000228918 A0A1W2PPE3 182 aa13.96□□□□□ -0.17
LTBR-201ENST00000228918 MED19A0JLT2 244 aaPredicted RBP13.96□□□□□ -0.17
LTBR-201ENST00000228918 UMAD1C9J7I0 102 aa13.96□□□□□ -0.17
LTBR-201ENST00000228918 SCTP09683 121 aa13.96□□□□□ -0.17
LTBR-201ENST00000228918 FABP9Q0Z7S8 132 aa13.96□□□□□ -0.17
LTBR-201ENST00000228918 ZNF266Q14584 549 aa13.96□□□□□ -0.17
LTBR-201ENST00000228918 HERPUD1Q15011 391 aa13.96□□□□□ -0.17
LTBR-201ENST00000228918 SPIN3Q5JUX0 258 aa13.96□□□□□ -0.17
LTBR-201ENST00000228918 ZNF565Q8N9K5 539 aa13.96□□□□□ -0.17
LTBR-201ENST00000228918 PSMF1Q92530 271 aa13.96□□□□□ -0.17
LTBR-201ENST00000228918 PBDC1Q9BVG4 233 aa13.96□□□□□ -0.17
LTBR-201ENST00000228918 TUBA4BQ9H853 241 aa13.96□□□□□ -0.17
LTBR-201ENST00000228918 BOKQ9UMX3 212 aaPredicted RBP13.96□□□□□ -0.17
LTBR-201ENST00000228918 A0A1B0GW64 132 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 M0R036 132 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 WRBO00258 174 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 IGHV2-5P01817 119 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 CCNOP22674 350 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 GPM6AP51674 278 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 CLINT1Q14677 625 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 SSPNQ14714 243 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 TIPARPQ7Z3E1 657 aaKnown RBP13.95□□□□□ -0.18
LTBR-201ENST00000228918 ZDHHC23Q8IYP9 409 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 GAPTQ8N292 157 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 ABHD14BQ96IU4 210 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 SLC35B3Q9H1N7 401 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 LYRM2Q9NU23 88 aaPredicted RBP13.95□□□□□ -0.18
LTBR-201ENST00000228918 IL36RNQ9UBH0 155 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 FBXO7Q9Y3I1 522 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 A0A096LPE4 126 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 IGKV1D-13A0A0B4J2D9 117 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 A0A1W2PPZ6 126 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 SLC22A20A6NK97 555 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 ZNHIT1O43257 154 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 ADAM20O43506 726 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 TUSC2O75896 110 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 MT-ND4LP03901 98 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 IGKV1-13P0DP09 117 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 CCL2P13500 99 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 MPV17LQ2QL34 196 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 CEACAM21Q3KPI0 293 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 C9orf135Q5VTT2 229 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 TAAR9Q96RI9 348 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 C20orf24Q9BUV8 137 aa13.95□□□□□ -0.18
LTBR-201ENST00000228918 DUXBA0A1W2PPF3 345 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 CLEC18AA5D8T8 446 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 ZNF724A8MTY0 619 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 SSSCA1O60232 199 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 PDGFBP01127 241 aaPredicted RBP13.94□□□□□ -0.18
LTBR-201ENST00000228918 HLA-HP01893 362 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms