RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 ZNF552Q9H707 407 aaPredicted RBP19.05■□□□□ 0.64
CCDC9-201ENST00000221922 ASCL3Q9NQ33 180 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 KPTNQ9Y664 436 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 SPP1P10451 314 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 RAB1AP62820 205 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 C3AR1Q16581 482 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 ZDHHC23Q8IYP9 409 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 RSRP1Q9BUV0 290 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 ZNF442Q9H7R0 627 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 SMCO4Q9NRQ5 59 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 FAM221AA4D161 298 aa19.04■□□□□ 0.64
CCDC9-201ENST00000221922 SS18L1O75177 396 aaPredicted RBP19.04■□□□□ 0.64
CCDC9-201ENST00000221922 OR7C1O76099 320 aaPredicted RBP19.04■□□□□ 0.64
CCDC9-201ENST00000221922 DIRAS3O95661 229 aa19.04■□□□□ 0.64
CCDC9-201ENST00000221922 FOLR2P14207 255 aa19.04■□□□□ 0.64
CCDC9-201ENST00000221922 SNCAP37840 140 aa19.04■□□□□ 0.64
CCDC9-201ENST00000221922 GLP1RP43220 463 aa19.04■□□□□ 0.64
CCDC9-201ENST00000221922 FOXG1P55316 489 aaPredicted RBP19.04■□□□□ 0.64
CCDC9-201ENST00000221922 Q6ZPA2 131 aa19.04■□□□□ 0.64
CCDC9-201ENST00000221922 ZDHHC11Q9H8X9 412 aa19.04■□□□□ 0.64
CCDC9-201ENST00000221922 ZDHHC8Q9ULC8 765 aa19.04■□□□□ 0.64
CCDC9-201ENST00000221922 SHANK1Q9Y566 2161 aa19.04■□□□□ 0.64
CCDC9-201ENST00000221922 TSPAN15O95858 294 aa19.04■□□□□ 0.64
CCDC9-201ENST00000221922 CEACAM21Q3KPI0 293 aa19.04■□□□□ 0.64
CCDC9-201ENST00000221922 CLEC9AQ6UXN8 241 aa19.04■□□□□ 0.64
CCDC9-201ENST00000221922 OR5L1Q8NGL2 311 aa19.04■□□□□ 0.64
CCDC9-201ENST00000221922 WDYHV1Q96HA8 205 aa19.04■□□□□ 0.64
CCDC9-201ENST00000221922 AKR1E2Q96JD6 320 aa19.04■□□□□ 0.64
CCDC9-201ENST00000221922 ESRP2Q9H6T0 727 aaKnown RBP19.04■□□□□ 0.64
CCDC9-201ENST00000221922 TRGV5A0A0B4J1U4 118 aa19.03■□□□□ 0.64
CCDC9-201ENST00000221922 ZNF98A6NK75 572 aa19.03■□□□□ 0.64
CCDC9-201ENST00000221922 RNFT1Q5M7Z0 435 aa19.03■□□□□ 0.64
CCDC9-201ENST00000221922 NUFIP2Q7Z417 695 aaKnown RBP19.03■□□□□ 0.64
CCDC9-201ENST00000221922 CCDC71LQ8N9Z2 235 aa19.03■□□□□ 0.64
CCDC9-201ENST00000221922 KDF1Q8NAX2 398 aaPredicted RBP19.03■□□□□ 0.64
CCDC9-201ENST00000221922 OR52M1Q8NGK5 317 aa19.03■□□□□ 0.64
CCDC9-201ENST00000221922 SECTM1Q8WVN6 248 aa19.03■□□□□ 0.64
CCDC9-201ENST00000221922 POM121L2Q96KW2 1035 aa19.03■□□□□ 0.64
CCDC9-201ENST00000221922 EGLN1Q9GZT9 426 aa19.03■□□□□ 0.64
CCDC9-201ENST00000221922 DEFB127Q9H1M4 99 aa19.03■□□□□ 0.64
CCDC9-201ENST00000221922 TMED3Q9Y3Q3 217 aa19.03■□□□□ 0.64
CCDC9-201ENST00000221922 ZNF503-AS2A6NEH8 195 aa19.02■□□□□ 0.64
CCDC9-201ENST00000221922 ST8SIA3O43173 380 aa19.02■□□□□ 0.64
CCDC9-201ENST00000221922 CCL2P13500 99 aa19.02■□□□□ 0.64
CCDC9-201ENST00000221922 LMO1P25800 156 aa19.02■□□□□ 0.64
CCDC9-201ENST00000221922 NPBWR2P48146 333 aa19.02■□□□□ 0.64
CCDC9-201ENST00000221922 TNFSF10P50591 281 aa19.02■□□□□ 0.64
CCDC9-201ENST00000221922 DAZAP2Q15038 168 aaPredicted RBP19.02■□□□□ 0.64
CCDC9-201ENST00000221922 VASH2Q86V25 355 aa19.02■□□□□ 0.64
CCDC9-201ENST00000221922 OR11L1Q8NGX0 322 aa19.02■□□□□ 0.64
CCDC9-201ENST00000221922 HPSE2Q8WWQ2 592 aa19.02■□□□□ 0.64
CCDC9-201ENST00000221922 PLSCR2Q9NRY7 297 aa19.02■□□□□ 0.64
CCDC9-201ENST00000221922 LUZP4Q9P127 313 aa19.02■□□□□ 0.64
CCDC9-201ENST00000221922 SPRR3Q9UBC9 169 aa19.02■□□□□ 0.64
CCDC9-201ENST00000221922 GLAP06280 429 aa19.02■□□□□ 0.63
CCDC9-201ENST00000221922 RPL35P42766 123 aaKnown RBP19.02■□□□□ 0.63
CCDC9-201ENST00000221922 MIDNQ504T8 468 aa19.02■□□□□ 0.63
CCDC9-201ENST00000221922 IGF2-ASQ6U949 168 aa19.02■□□□□ 0.63
CCDC9-201ENST00000221922 FBXW12Q6X9E4 464 aa19.02■□□□□ 0.63
CCDC9-201ENST00000221922 C15orf54Q8N8G6 183 aa19.02■□□□□ 0.63
CCDC9-201ENST00000221922 GP6Q9HCN6 339 aa19.02■□□□□ 0.63
CCDC9-201ENST00000221922 FAM86C1Q9NVL1 165 aa19.02■□□□□ 0.63
CCDC9-201ENST00000221922 COA4Q9NYJ1 87 aa19.02■□□□□ 0.63
CCDC9-201ENST00000221922 FBXO9Q9UK97 447 aaPredicted RBP19.02■□□□□ 0.63
CCDC9-201ENST00000221922 AADACP22760 399 aa19.01■□□□□ 0.63
CCDC9-201ENST00000221922 RAB5CP51148 216 aa19.01■□□□□ 0.63
CCDC9-201ENST00000221922 FGF12P61328 243 aa19.01■□□□□ 0.63
CCDC9-201ENST00000221922 MKXQ8IYA7 352 aa19.01■□□□□ 0.63
CCDC9-201ENST00000221922 OR4D5Q8NGN0 318 aa19.01■□□□□ 0.63
CCDC9-201ENST00000221922 HIST1H2AAQ96QV6 131 aa19.01■□□□□ 0.63
CCDC9-201ENST00000221922 PARP12Q9H0J9 701 aaKnown RBP19.01■□□□□ 0.63
CCDC9-201ENST00000221922 PHF1O43189 567 aaPredicted RBP19.01■□□□□ 0.63
CCDC9-201ENST00000221922 BCL3P20749 454 aa19.01■□□□□ 0.63
CCDC9-201ENST00000221922 APLNRP35414 380 aa19.01■□□□□ 0.63
CCDC9-201ENST00000221922 HAAOP46952 286 aa19.01■□□□□ 0.63
CCDC9-201ENST00000221922 GPM6AP51674 278 aa19.01■□□□□ 0.63
CCDC9-201ENST00000221922 AKR1D1P51857 326 aa19.01■□□□□ 0.63
CCDC9-201ENST00000221922 HERV-K104P61576 105 aa19.01■□□□□ 0.63
CCDC9-201ENST00000221922 SRSF7Q16629 238 aaKnown RBP eCLIP19.01■□□□□ 0.637e-9■■■■■ 29.3
CCDC9-201ENST00000221922 Q6ZS49 121 aa19.01■□□□□ 0.63
CCDC9-201ENST00000221922 OR5A2Q8NGI9 324 aa19.01■□□□□ 0.63
CCDC9-201ENST00000221922 NANOS1Q8WY41 292 aaKnown RBP19.01■□□□□ 0.63
CCDC9-201ENST00000221922 SLAMF9Q96A28 289 aa19.01■□□□□ 0.63
CCDC9-201ENST00000221922 STRAPQ9Y3F4 350 aaKnown RBP19.01■□□□□ 0.63
CCDC9-201ENST00000221922 NKX2-8O15522 239 aa19■□□□□ 0.63
CCDC9-201ENST00000221922 GLI4P10075 376 aa19■□□□□ 0.63
CCDC9-201ENST00000221922 PPT1P50897 306 aa19■□□□□ 0.63
CCDC9-201ENST00000221922 GUK1Q16774 197 aa19■□□□□ 0.63
CCDC9-201ENST00000221922 EXTL1Q92935 676 aa19■□□□□ 0.63
CCDC9-201ENST00000221922 ZNF732B4DXR9 585 aa18.99■□□□□ 0.63
CCDC9-201ENST00000221922 PPYP01298 95 aa18.99■□□□□ 0.63
CCDC9-201ENST00000221922 PDCD1Q15116 288 aa18.99■□□□□ 0.63
CCDC9-201ENST00000221922 MPV17LQ2QL34 196 aa18.99■□□□□ 0.63
CCDC9-201ENST00000221922 TMPRSS7Q7RTY8 843 aa18.99■□□□□ 0.63
CCDC9-201ENST00000221922 TP53RKQ96S44 253 aa18.99■□□□□ 0.63
CCDC9-201ENST00000221922 C11orf1Q9H5F2 150 aa18.99■□□□□ 0.63
CCDC9-201ENST00000221922 SLC22A20A6NK97 555 aa18.99■□□□□ 0.63
CCDC9-201ENST00000221922 TRAPPC2LH3BP13 241 aa18.99■□□□□ 0.63
CCDC9-201ENST00000221922 MPPED1O15442 326 aa18.99■□□□□ 0.63
CCDC9-201ENST00000221922 KCNJ3P48549 501 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms