RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 HSF4Q9ULV5 492 aa22.58■■□□□ 1.21
CHMP4B-201ENST00000217402 A3GALT2U3KPV4 340 aa22.58■■□□□ 1.21
CHMP4B-201ENST00000217402 TRAV18A0A075B6X5 111 aa22.57■■□□□ 1.2
CHMP4B-201ENST00000217402 CSN2P05814 226 aa22.57■■□□□ 1.2
CHMP4B-201ENST00000217402 HIST1H1DP16402 221 aaKnown RBP22.57■■□□□ 1.2
CHMP4B-201ENST00000217402 BTN2A1Q7KYR7 527 aa22.57■■□□□ 1.2
CHMP4B-201ENST00000217402 COQ2Q96H96 371 aa22.57■■□□□ 1.2
CHMP4B-201ENST00000217402 ADAM30Q9UKF2 790 aa22.57■■□□□ 1.2
CHMP4B-201ENST00000217402 CREBBPQ92793 2442 aa22.57■■□□□ 1.2
CHMP4B-201ENST00000217402 MEX3AA1L020 520 aaKnown RBP22.57■■□□□ 1.2
CHMP4B-201ENST00000217402 KIAA1324LA8MWY0 1029 aaPredicted RBP22.57■■□□□ 1.2
CHMP4B-201ENST00000217402 KRBOX4Q5JUW0 171 aa22.57■■□□□ 1.2
CHMP4B-201ENST00000217402 TMEM69Q5SWH9 247 aa22.57■■□□□ 1.2
CHMP4B-201ENST00000217402 EXTL2Q9UBQ6 330 aa22.57■■□□□ 1.2
CHMP4B-201ENST00000217402 KCNK7Q9Y2U2 307 aa22.57■■□□□ 1.2
CHMP4B-201ENST00000217402 A0A0A6YYH2 397 aa22.56■■□□□ 1.2
CHMP4B-201ENST00000217402 A6NJ64 397 aa22.56■■□□□ 1.2
CHMP4B-201ENST00000217402 MFNGO00587 321 aa22.56■■□□□ 1.2
CHMP4B-201ENST00000217402 GLAP06280 429 aa22.56■■□□□ 1.2
CHMP4B-201ENST00000217402 GLIPR1P48060 266 aa22.56■■□□□ 1.2
CHMP4B-201ENST00000217402 CDNFQ49AH0 187 aa22.56■■□□□ 1.2
CHMP4B-201ENST00000217402 CNIH2Q6PI25 160 aa22.56■■□□□ 1.2
CHMP4B-201ENST00000217402 AK3Q9UIJ7 227 aa22.56■■□□□ 1.2
CHMP4B-201ENST00000217402 MALRD1Q5VYJ5 2156 aa22.56■■□□□ 1.2
CHMP4B-201ENST00000217402 CR1P17927 2039 aa22.55■■□□□ 1.2
CHMP4B-201ENST00000217402 A8MXK9 166 aa22.55■■□□□ 1.2
CHMP4B-201ENST00000217402 C22orf46C9J442 243 aa22.55■■□□□ 1.2
CHMP4B-201ENST00000217402 XRCC3O43542 346 aa22.55■■□□□ 1.2
CHMP4B-201ENST00000217402 CLPXO76031 633 aa22.55■■□□□ 1.2
CHMP4B-201ENST00000217402 KCNJ3P48549 501 aa22.55■■□□□ 1.2
CHMP4B-201ENST00000217402 P2RX3P56373 397 aa22.55■■□□□ 1.2
CHMP4B-201ENST00000217402 TMEM249Q2WGJ8 235 aa22.55■■□□□ 1.2
CHMP4B-201ENST00000217402 NUDT16L1Q9BRJ7 211 aaKnown RBP22.55■■□□□ 1.2
CHMP4B-201ENST00000217402 C19orf12Q9NSK7 152 aa22.55■■□□□ 1.2
CHMP4B-201ENST00000217402 KIF25Q9UIL4 384 aa22.55■■□□□ 1.2
CHMP4B-201ENST00000217402 ELF5Q9UKW6 265 aaPredicted RBP22.55■■□□□ 1.2
CHMP4B-201ENST00000217402 ABCA2Q9BZC7 2435 aa22.55■■□□□ 1.2
CHMP4B-201ENST00000217402 MED13LQ71F56 2210 aa22.55■■□□□ 1.2
CHMP4B-201ENST00000217402 LOC105371242A0A075B767 164 aa22.54■■□□□ 1.2
CHMP4B-201ENST00000217402 GPR37O15354 613 aa22.54■■□□□ 1.2
CHMP4B-201ENST00000217402 FOXH1O75593 365 aa22.54■■□□□ 1.2
CHMP4B-201ENST00000217402 S100A5P33763 92 aa22.54■■□□□ 1.2
CHMP4B-201ENST00000217402 TALDO1P37837 337 aa22.54■■□□□ 1.2
CHMP4B-201ENST00000217402 RSBN1Q5VWQ0 802 aaPredicted RBP22.54■■□□□ 1.2
CHMP4B-201ENST00000217402 DIRAS2Q96HU8 199 aa22.54■■□□□ 1.2
CHMP4B-201ENST00000217402 DCTN5Q9BTE1 182 aa22.54■■□□□ 1.2
CHMP4B-201ENST00000217402 PTTG2Q9NZH5 202 aa22.54■■□□□ 1.2
CHMP4B-201ENST00000217402 MRPS7Q9Y2R9 242 aaKnown RBP22.54■■□□□ 1.2
CHMP4B-201ENST00000217402 FLNAP21333 2647 aaKnown RBP22.53■■□□□ 1.2
CHMP4B-201ENST00000217402 TMEM235A6NFC5 223 aa22.53■■□□□ 1.2
CHMP4B-201ENST00000217402 TAS2R20P59543 309 aa22.53■■□□□ 1.2
CHMP4B-201ENST00000217402 RPL31P62899 125 aaKnown RBP22.53■■□□□ 1.2
CHMP4B-201ENST00000217402 FAM185AQ8N0U4 392 aa22.53■■□□□ 1.2
CHMP4B-201ENST00000217402 HDHD3Q9BSH5 251 aaPredicted RBP22.53■■□□□ 1.2
CHMP4B-201ENST00000217402 MEIKINA0A087WXM9 373 aa22.53■■□□□ 1.2
CHMP4B-201ENST00000217402 TMEM30CPA0ZSE6 113 aa22.53■■□□□ 1.2
CHMP4B-201ENST00000217402 PTHLHP12272 177 aa22.53■■□□□ 1.2
CHMP4B-201ENST00000217402 TNFSF8P32971 234 aa22.53■■□□□ 1.2
CHMP4B-201ENST00000217402 ZNF260Q3ZCT1 412 aa22.53■■□□□ 1.2
CHMP4B-201ENST00000217402 ZNF497Q6ZNH5 498 aa22.53■■□□□ 1.2
CHMP4B-201ENST00000217402 RPUSD1Q9UJJ7 312 aaKnown RBP22.53■■□□□ 1.2
CHMP4B-201ENST00000217402 A0A1W2PQ09 198 aa22.52■■□□□ 1.2
CHMP4B-201ENST00000217402 ODAMA1E959 279 aa22.52■■□□□ 1.2
CHMP4B-201ENST00000217402 IGHV4-31P0DP07 118 aa22.52■■□□□ 1.2
CHMP4B-201ENST00000217402 ERP29P30040 261 aaKnown RBP22.52■■□□□ 1.2
CHMP4B-201ENST00000217402 CD276Q5ZPR3 534 aa22.52■■□□□ 1.2
CHMP4B-201ENST00000217402 WDFY2Q96P53 400 aa22.52■■□□□ 1.2
CHMP4B-201ENST00000217402 CHMP1AQ9HD42 196 aaPredicted RBP22.52■■□□□ 1.2
CHMP4B-201ENST00000217402 TRAV39A0A0B4J263 110 aa22.51■■□□□ 1.19
CHMP4B-201ENST00000217402 FUOMA2VDF0 154 aa22.51■■□□□ 1.19
CHMP4B-201ENST00000217402 SERPINE3A8MV23 424 aa22.51■■□□□ 1.19
CHMP4B-201ENST00000217402 B4DSR2 109 aa22.51■■□□□ 1.19
CHMP4B-201ENST00000217402 ECDO95905 644 aaPredicted RBP22.51■■□□□ 1.19
CHMP4B-201ENST00000217402 MSMBP08118 114 aa22.51■■□□□ 1.19
CHMP4B-201ENST00000217402 GSTP1P09211 210 aaKnown RBP22.51■■□□□ 1.19
CHMP4B-201ENST00000217402 MNDAP41218 407 aa22.51■■□□□ 1.19
CHMP4B-201ENST00000217402 ARFRP1Q13795 201 aa22.51■■□□□ 1.19
CHMP4B-201ENST00000217402 ARL6IP1Q15041 203 aa22.51■■□□□ 1.19
CHMP4B-201ENST00000217402 SLC35E4Q6ICL7 350 aa22.51■■□□□ 1.19
CHMP4B-201ENST00000217402 OR6Q1Q8NGQ2 317 aa22.51■■□□□ 1.19
CHMP4B-201ENST00000217402 OR4K15Q8NH41 348 aa22.51■■□□□ 1.19
CHMP4B-201ENST00000217402 CCDC107Q8WV48 283 aa22.51■■□□□ 1.19
CHMP4B-201ENST00000217402 C1orf159Q96HA4 380 aa22.51■■□□□ 1.19
CHMP4B-201ENST00000217402 COX4I2Q96KJ9 171 aa22.51■■□□□ 1.19
CHMP4B-201ENST00000217402 CMSS1Q9BQ75 279 aaKnown RBP22.51■■□□□ 1.19
CHMP4B-201ENST00000217402 AUNIPQ9H7T9 357 aa22.51■■□□□ 1.19
CHMP4B-201ENST00000217402 TRBV23-1A0A0A0MS06 115 aa22.5■■□□□ 1.19
CHMP4B-201ENST00000217402 CD3GP09693 182 aa22.5■■□□□ 1.19
CHMP4B-201ENST00000217402 MRPS15P82914 257 aaKnown RBP22.5■■□□□ 1.19
CHMP4B-201ENST00000217402 SPNS3Q6ZMD2 512 aa22.5■■□□□ 1.19
CHMP4B-201ENST00000217402 TRAPPC6BQ86SZ2 158 aa22.5■■□□□ 1.19
CHMP4B-201ENST00000217402 SNX29P2Q8IUI4 249 aa22.5■■□□□ 1.19
CHMP4B-201ENST00000217402 LINC01356Q8N9X3 169 aa22.5■■□□□ 1.19
CHMP4B-201ENST00000217402 NUDCD2Q8WVJ2 157 aa22.5■■□□□ 1.19
CHMP4B-201ENST00000217402 GCDHQ92947 438 aaPredicted RBP22.5■■□□□ 1.19
CHMP4B-201ENST00000217402 MSI2Q96DH6 328 aaKnown RBP22.5■■□□□ 1.19
CHMP4B-201ENST00000217402 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP22.5■■□□□ 1.196e-7■■■■■ 30.2
CHMP4B-201ENST00000217402 MMP26Q9NRE1 261 aa22.5■■□□□ 1.19
CHMP4B-201ENST00000217402 ZNF469Q96JG9 3925 aaPredicted RBP22.5■■□□□ 1.19
CHMP4B-201ENST00000217402 CA11O75493 328 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms