RNA–Protein interactions for RNA: ENST00000216121.11

NIPSNAP1-201, Transcript of nipsnap homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP1, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-201ENST00000216121 NHLH2Q02577 135 aa18.89■□□□□ 0.61
NIPSNAP1-201ENST00000216121 PLP2Q04941 152 aa18.89■□□□□ 0.61
NIPSNAP1-201ENST00000216121 C5orf24Q7Z6I8 188 aa18.89■□□□□ 0.61
NIPSNAP1-201ENST00000216121 HIST1H2AAQ96QV6 131 aa18.89■□□□□ 0.61
NIPSNAP1-201ENST00000216121 KIR2DS1A0A191URI9 304 aa18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 IL32P24001 234 aa18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 KIR2DS4P43632 304 aa18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 UCP2P55851 309 aa18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 KIR2DS1Q14954 304 aa18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 HERPUD1Q15011 391 aa18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 NUFIP2Q7Z417 695 aaKnown RBP18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 COMMD1Q8N668 190 aa18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 DEFB123Q8N688 67 aa18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 ZNF565Q8N9K5 539 aa18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 SECTM1Q8WVN6 248 aa18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 UBE2J1Q9Y385 318 aaPredicted RBP18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 PRELID3BQ9Y3B1 194 aa18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 CTXN2P0C2S0 81 aa18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 OR5P3Q8WZ94 311 aa18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 GTF3AQ92664 365 aaKnown RBP18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 PARP12Q9H0J9 701 aaKnown RBP18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 LUZP4Q9P127 313 aa18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 ATP23Q9Y6H3 246 aa18.88■□□□□ 0.61
NIPSNAP1-201ENST00000216121 MED13Q9UHV7 2174 aa18.87■□□□□ 0.61
NIPSNAP1-201ENST00000216121 MUC3AQ02505 3323 aa18.87■□□□□ 0.61
NIPSNAP1-201ENST00000216121 SLC22A20A6NK97 555 aa18.87■□□□□ 0.61
NIPSNAP1-201ENST00000216121 SYNGR1O43759 233 aa18.87■□□□□ 0.61
NIPSNAP1-201ENST00000216121 TSPAN15O95858 294 aa18.87■□□□□ 0.61
NIPSNAP1-201ENST00000216121 RAB5CP51148 216 aa18.87■□□□□ 0.61
NIPSNAP1-201ENST00000216121 TSC22D1Q15714 1073 aa18.87■□□□□ 0.61
NIPSNAP1-201ENST00000216121 SPIN3Q5JUX0 258 aa18.87■□□□□ 0.61
NIPSNAP1-201ENST00000216121 ZNF818PQ6ZRF7 136 aa18.87■□□□□ 0.61
NIPSNAP1-201ENST00000216121 LINC00596Q86U02 117 aa18.87■□□□□ 0.61
NIPSNAP1-201ENST00000216121 ZNF695Q8IW36 515 aa18.87■□□□□ 0.61
NIPSNAP1-201ENST00000216121 SELENOHQ8IZQ5 122 aaKnown RBP18.87■□□□□ 0.61
NIPSNAP1-201ENST00000216121 BOD1Q96IK1 185 aa18.87■□□□□ 0.61
NIPSNAP1-201ENST00000216121 PLK3Q9H4B4 646 aa18.87■□□□□ 0.61
NIPSNAP1-201ENST00000216121 NDUFA2O43678 99 aa18.86■□□□□ 0.61
NIPSNAP1-201ENST00000216121 SP1P08047 785 aa18.86■□□□□ 0.61
NIPSNAP1-201ENST00000216121 CD59P13987 128 aa18.86■□□□□ 0.61
NIPSNAP1-201ENST00000216121 SNCAP37840 140 aa18.86■□□□□ 0.61
NIPSNAP1-201ENST00000216121 MIDNQ504T8 468 aa18.86■□□□□ 0.61
NIPSNAP1-201ENST00000216121 GAPTQ8N292 157 aa18.86■□□□□ 0.61
NIPSNAP1-201ENST00000216121 SPIN2AQ99865 258 aa18.86■□□□□ 0.61
NIPSNAP1-201ENST00000216121 SPIN2BQ9BPZ2 258 aa18.86■□□□□ 0.61
NIPSNAP1-201ENST00000216121 RIMS4Q9H426 269 aaPredicted RBP18.86■□□□□ 0.61
NIPSNAP1-201ENST00000216121 CACFD1Q9UGQ2 172 aa18.86■□□□□ 0.61
NIPSNAP1-201ENST00000216121 ARHGAP21Q5T5U3 1957 aa18.86■□□□□ 0.61
NIPSNAP1-201ENST00000216121 IGKV1D-13A0A0B4J2D9 117 aa18.86■□□□□ 0.61
NIPSNAP1-201ENST00000216121 IGKV1-13P0DP09 117 aa18.86■□□□□ 0.61
NIPSNAP1-201ENST00000216121 NFYBP25208 207 aa18.86■□□□□ 0.61
NIPSNAP1-201ENST00000216121 EWSR1Q01844 656 aaKnown RBP eCLIP18.86■□□□□ 0.61
NIPSNAP1-201ENST00000216121 MCEMP1Q8IX19 187 aa18.86■□□□□ 0.61
NIPSNAP1-201ENST00000216121 NEK7Q8TDX7 302 aa18.86■□□□□ 0.61
NIPSNAP1-201ENST00000216121 SPACA1Q9HBV2 294 aa18.86■□□□□ 0.61
NIPSNAP1-201ENST00000216121 IGKV1-6A0A0C4DH72 117 aa18.85■□□□□ 0.61
NIPSNAP1-201ENST00000216121 NME2P1O60361 137 aa18.85■□□□□ 0.61
NIPSNAP1-201ENST00000216121 NKX2-1P43699 371 aaPredicted RBP18.85■□□□□ 0.61
NIPSNAP1-201ENST00000216121 MEOX1P50221 254 aa18.85■□□□□ 0.61
NIPSNAP1-201ENST00000216121 C3AR1Q16581 482 aa18.85■□□□□ 0.61
NIPSNAP1-201ENST00000216121 OR2C3Q8N628 320 aa18.85■□□□□ 0.61
NIPSNAP1-201ENST00000216121 SCRT1Q9BWW7 348 aa18.85■□□□□ 0.61
NIPSNAP1-201ENST00000216121 KLF13Q9Y2Y9 288 aaPredicted RBP18.85■□□□□ 0.61
NIPSNAP1-201ENST00000216121 STRAPQ9Y3F4 350 aaKnown RBP18.85■□□□□ 0.61
NIPSNAP1-201ENST00000216121 MPC1Q9Y5U8 109 aa18.85■□□□□ 0.61
NIPSNAP1-201ENST00000216121 WDFY4Q6ZS81 3184 aa18.85■□□□□ 0.61
NIPSNAP1-201ENST00000216121 DUXBA0A1W2PPF3 345 aa18.85■□□□□ 0.61
NIPSNAP1-201ENST00000216121 HSPB6O14558 160 aa18.85■□□□□ 0.61
NIPSNAP1-201ENST00000216121 PRKACAP17612 351 aa18.85■□□□□ 0.61
NIPSNAP1-201ENST00000216121 MDS2Q8NDY4 140 aa18.85■□□□□ 0.61
NIPSNAP1-201ENST00000216121 ABHD14BQ96IU4 210 aa18.85■□□□□ 0.61
NIPSNAP1-201ENST00000216121 MLXQ9UH92 298 aa18.85■□□□□ 0.61
NIPSNAP1-201ENST00000216121 KNTC1P50748 2209 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 TRBV6-6A0A0A6YYG2 114 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 CLEC18AA5D8T8 446 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 ANKRD30BLA7E2S9 258 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 MT-CO3P00414 261 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 UCP1P25874 307 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 WNT5AP41221 380 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 CAMLGP49069 296 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 HMGN3Q15651 99 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 ZNF573Q86YE8 665 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 SUMF2Q8NBJ7 301 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 CLEC18CQ8NCF0 446 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 LILRB1Q8NHL6 650 aaPredicted RBP18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 SH3BGRL3Q9H299 93 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 IL17BQ9UHF5 180 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 LHX6Q9UPM6 363 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 KPTNQ9Y664 436 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 OR5B21A6NL26 309 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 SP9P0CG40 484 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 LMO1P25800 156 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 APLNRP35414 380 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 ZNF616Q08AN1 781 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 OR10Z1Q8NGY1 313 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 MRPL30Q8TCC3 161 aaKnown RBP18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 AKR1E2Q96JD6 320 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 IP6K3Q96PC2 410 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 C19orf12Q9NSK7 152 aa18.84■□□□□ 0.61
NIPSNAP1-201ENST00000216121 PRSS50Q9UI38 385 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms