RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 PTPMT1Q8WUK0 201 aaPredicted RBP9.23□□□□□ -0.93
VCL-201ENST00000211998 SPSB1Q96BD6 273 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 C8orf44Q96CB5 159 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 SLC26A1Q9H2B4 701 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 C5orf49A4QMS7 147 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 B4GALNT1Q00973 533 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 SRSF9Q13242 221 aaKnown RBP eCLIP9.22□□□□□ -0.93
VCL-201ENST00000211998 SLC35E4Q6ICL7 350 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 LRRC75AQ8NAA5 344 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 TMEM116Q8NCL8 245 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 TSPAN32Q96QS1 320 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 NDUFAF3Q9BU61 184 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 COL25A1Q9BXS0 654 aaPredicted RBP9.22□□□□□ -0.93
VCL-201ENST00000211998 KLK13Q9UKR3 277 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 ZFP30Q9Y2G7 519 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 ITGB4P16144 1822 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 NHSQ6T4R5 1651 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 CACNA1CQ13936 2221 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 H3BMH7 237 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 PITX3O75364 302 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 GLIPR1P48060 266 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 TNFRSF9Q07011 255 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 PARLQ9H300 379 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 GNB4Q9HAV0 340 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 TMEM30AQ9NV96 361 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 CES1P1Q9UKY3 287 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 ICAM5Q9UMF0 924 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 SERTM1A2A2V5 107 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 OR4C46A6NHA9 309 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 RUNX1Q01196 453 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 FMODQ06828 376 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 SAMD13Q5VXD3 122 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 FDX2Q6P4F2 183 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 FAM181AQ8N9Y4 354 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 CADM4Q8NFZ8 388 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 RNF133Q8WVZ7 376 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 EID2BQ96D98 161 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 MYEOVQ96EZ4 313 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 POM121L2Q96KW2 1035 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 SH2D2AQ9NP31 389 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 P4HTMQ9NXG6 502 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 SCN7AQ01118 1682 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 CEACAM6P40199 344 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 GZMMP51124 257 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 NIT1Q86X76 327 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 LURAP1LQ8IV03 231 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 KCNK7Q9Y2U2 307 aa9.22□□□□□ -0.93
VCL-201ENST00000211998 OR2M5A3KFT3 312 aa9.21□□□□□ -0.93
VCL-201ENST00000211998 HIST1H1EP10412 219 aaKnown RBP9.21□□□□□ -0.93
VCL-201ENST00000211998 RPL11P62913 178 aaKnown RBP9.21□□□□□ -0.93
VCL-201ENST00000211998 TCTN1Q2MV58 587 aa9.21□□□□□ -0.93
VCL-201ENST00000211998 OR10V1Q8NGI7 309 aa9.21□□□□□ -0.93
VCL-201ENST00000211998 OR2V1Q8NHB1 315 aa9.21□□□□□ -0.93
VCL-201ENST00000211998 LOXHD1Q8IVV2 1947 aa9.21□□□□□ -0.93
VCL-201ENST00000211998 COL22A1Q8NFW1 1626 aaPredicted RBP9.21□□□□□ -0.93
VCL-201ENST00000211998 CTXND1A0A1B0GTU2 59 aa9.21□□□□□ -0.93
VCL-201ENST00000211998 GFERP55789 205 aa9.21□□□□□ -0.93
VCL-201ENST00000211998 DSCR4P56555 118 aaPredicted RBP9.21□□□□□ -0.93
VCL-201ENST00000211998 EIF3IQ13347 325 aaKnown RBP9.21□□□□□ -0.93
VCL-201ENST00000211998 ATOH7Q8N100 152 aa9.21□□□□□ -0.93
VCL-201ENST00000211998 OR10X1Q8NGY0 326 aa9.21□□□□□ -0.93
VCL-201ENST00000211998 OR10AC1Q8NH08 325 aa9.21□□□□□ -0.93
VCL-201ENST00000211998 TMEM167BQ9NRX6 74 aa9.21□□□□□ -0.93
VCL-201ENST00000211998 LRP5O75197 1615 aa9.21□□□□□ -0.93
VCL-201ENST00000211998 SMPD2O60906 423 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 VDAC1P21796 283 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 DEFB109BQ30KR1 87 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 ST6GALNAC3Q8NDV1 305 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 EDARADDQ8WWZ3 215 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 FGF14Q92915 247 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 SPACA9Q96E40 222 aaPredicted RBP9.21□□□□□ -0.94
VCL-201ENST00000211998 ARRDC1-AS1Q9H2J1 176 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 TMEM140Q9NV12 185 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 ST6GALNAC2Q9UJ37 374 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 M0R1B8 84 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 DHHO43323 396 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 PEX11BO96011 259 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 MELTFP08582 738 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 FAM157CP0CG43 387 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 HKR1P10072 659 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 LAIR2Q6ISS4 152 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 NOXO1Q8NFA2 376 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 ZNF707Q96C28 371 aaPredicted RBP9.21□□□□□ -0.94
VCL-201ENST00000211998 OR2J1Q9GZK6 312 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 HES4Q9HCC6 221 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 OR2A4O95047 310 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 ZNF205O95201 554 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 RND3P61587 244 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 SLC35B1P78383 322 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 OR2A7Q96R45 310 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 LRRC61Q9BV99 259 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 MRPL18Q9H0U6 180 aaKnown RBP9.21□□□□□ -0.94
VCL-201ENST00000211998 AP5S1Q9NUS5 200 aa9.21□□□□□ -0.94
VCL-201ENST00000211998 TRDCB7Z8K6 153 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 SNCGO76070 127 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 CDS2O95674 445 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 CYC1P08574 325 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 PPP1CCP36873 323 aaKnown RBP9.2□□□□□ -0.94
VCL-201ENST00000211998 PSG5Q15238 335 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 DEGS2Q6QHC5 323 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms