RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ZFP92A6NM28 416 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 JTBO76095 146 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 CNN3Q15417 329 aaKnown RBP13□□□□□ -0.33
EFNB1-201ENST00000204961 BCO1Q9HAY6 547 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 C19orf12Q9NSK7 152 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 ZNF107Q9UII5 783 aaPredicted RBP13□□□□□ -0.33
EFNB1-201ENST00000204961 ZNF503-AS2A6NEH8 195 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 PROB1E7EW31 1015 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 CLN5O75503 358 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 PPYP01298 95 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 CHATP28329 748 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 CEBPDP49716 269 aaPredicted RBP13□□□□□ -0.33
EFNB1-201ENST00000204961 MLF1P58340 268 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 TMEM187Q14656 261 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 HIKESHIQ53FT3 197 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 TMPRSS7Q7RTY8 843 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 GCNT2Q8N0V5 402 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 OR2H1Q9GZK4 316 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 ZNF552Q9H707 407 aaPredicted RBP13□□□□□ -0.33
EFNB1-201ENST00000204961 STARD10Q9Y365 291 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 H0YL77 283 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 SIRPB1O00241 398 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 SYNGR3O43761 229 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 WDR1O75083 606 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 CTSDP07339 412 aaPredicted RBP13□□□□□ -0.33
EFNB1-201ENST00000204961 MAGEA5P43359 124 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 NKX2-1P43699 371 aaPredicted RBP13□□□□□ -0.33
EFNB1-201ENST00000204961 HIST3H3Q16695 136 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 FAM27BQ5VT28 67 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 CDPF1Q6NVV7 123 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 ZNF818PQ6ZRF7 136 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 RHOVQ96L33 236 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 TINAGQ9UJW2 476 aa13□□□□□ -0.33
EFNB1-201ENST00000204961 TIPARPQ7Z3E1 657 aaKnown RBP12.99□□□□□ -0.33
EFNB1-201ENST00000204961 IMMP1LQ96LU5 166 aa12.99□□□□□ -0.33
EFNB1-201ENST00000204961 SIGLEC12Q96PQ1 595 aa12.99□□□□□ -0.33
EFNB1-201ENST00000204961 RBMXL2O75526 392 aaKnown RBP12.99□□□□□ -0.33
EFNB1-201ENST00000204961 RNF224P0DH78 156 aa12.99□□□□□ -0.33
EFNB1-201ENST00000204961 DEFA4P12838 97 aa12.99□□□□□ -0.33
EFNB1-201ENST00000204961 CA6P23280 308 aa12.99□□□□□ -0.33
EFNB1-201ENST00000204961 ELLP55199 621 aaPredicted RBP12.99□□□□□ -0.33
EFNB1-201ENST00000204961 ADPRHL1Q8NDY3 354 aa12.99□□□□□ -0.33
EFNB1-201ENST00000204961 EDARADDQ8WWZ3 215 aa12.99□□□□□ -0.33
EFNB1-201ENST00000204961 IER2Q9BTL4 223 aa12.99□□□□□ -0.33
EFNB1-201ENST00000204961 TIMM10BQ9Y5J6 103 aa12.99□□□□□ -0.33
EFNB1-201ENST00000204961 V9GYS6 101 aa12.99□□□□□ -0.33
EFNB1-201ENST00000204961 C3orf85A0A1B0GTC6 90 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 ATP6V0CP27449 155 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 CYB561P49447 251 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 SULT1A2P50226 295 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 SRSF4Q08170 494 aaKnown RBP12.98□□□□□ -0.33
EFNB1-201ENST00000204961 PRDX4Q13162 271 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 CYB5R2Q6BCY4 276 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 OR2Y1Q8NGV0 311 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 GPR35Q9HC97 309 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 LUZP4Q9P127 313 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 ERRFI1Q9UJM3 462 aaPredicted RBP12.98□□□□□ -0.33
EFNB1-201ENST00000204961 IGSF23A1L1A6 192 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 E5RGE8 158 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 RHBDL1O75783 438 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 DYNLT3P51808 116 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 RAC3P60763 192 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 EIF5AP63241 154 aaKnown RBP12.98□□□□□ -0.33
EFNB1-201ENST00000204961 RAB35Q15286 201 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 SOHLH1Q5JUK2 328 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 LIAT1Q6ZQX7 453 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 THNSL2Q86YJ6 484 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 LGI3Q8N145 548 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 TPRX1Q8N7U7 411 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 TMEM100Q9NV29 134 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 NSG2Q9Y328 171 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 CACNA1BQ00975 2339 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 TRBV6-7A0A0A0MS04 114 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 A0A0U1RQV5 110 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 CHST1O43916 411 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 SMIM6P0DI80 62 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 DVL1P1P54792 670 aaPredicted RBP12.98□□□□□ -0.33
EFNB1-201ENST00000204961 LINC00205P59089 165 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 EWSR1Q01844 656 aaKnown RBP eCLIP12.98□□□□□ -0.33
EFNB1-201ENST00000204961 C20orf204Q6ZNR8 217 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 BEND4Q6ZU67 534 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 OIT3Q8WWZ8 545 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 SYT3Q9BQG1 590 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 ANGPTL4Q9BY76 406 aa12.98□□□□□ -0.33
EFNB1-201ENST00000204961 C5orf52A6NGY3 159 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 H7C1Q1 480 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 PDCD6O75340 191 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 TK1P04183 234 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 GRPP07492 148 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 FUT3P21217 361 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 NDUFA6P56556 154 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 RAB1AP62820 205 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 MRPS34P82930 218 aaKnown RBP12.97□□□□□ -0.33
EFNB1-201ENST00000204961 ZNF674Q2M3X9 581 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 GPR157Q5UAW9 335 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 BTNL8Q6UX41 500 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 IL34Q6ZMJ4 242 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 SUMF2Q8NBJ7 301 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 SMIM8Q96KF7 97 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 RSG1Q9BU20 258 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms