RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 E5RGE8 158 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 H7C1Q1 480 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 GPR31O00270 319 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 HS3ST1O14792 307 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 DEGS1O15121 323 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 MPPED1O15442 326 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 SCTP09683 121 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 RPL12P30050 165 aaKnown RBP7.05□□□□□ -1.28
VAMP3-201ENST00000054666 UCP2P55851 309 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 HLA-DRB3P79483 266 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 ACSF3Q4G176 576 aaPredicted RBP7.05□□□□□ -1.28
VAMP3-201ENST00000054666 VWA1Q6PCB0 445 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 CMTM1Q8IZ96 169 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 C17orf78Q8N4C9 275 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 C9orf106Q8NAJ2 232 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 OR4A4PQ8NGN8 299 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 TMED6Q8WW62 240 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 SPIN2AQ99865 258 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 SPIN2BQ9BPZ2 258 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 PIGMQ9H3S5 423 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 IFT22Q9H7X7 185 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 PLEKHA2Q9HB19 425 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 NSG2Q9Y328 171 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 UBE2J1Q9Y385 318 aaPredicted RBP7.05□□□□□ -1.28
VAMP3-201ENST00000054666 PTPRBP23467 1997 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 PIGBOS1A0A0B4J2F0 54 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 AHRRA9YTQ3 701 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 B8ZZF3 427 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 CEACAM4O75871 244 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 NXPH2O95156 264 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 HKR1P10072 659 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 CEACAM1P13688 526 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 CBR1P16152 277 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 SPINK2P20155 84 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 M6PRP20645 277 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 KIR2DL2P43627 348 aaPredicted RBP7.04□□□□□ -1.28
VAMP3-201ENST00000054666 RND3P61587 244 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 OR8G1Q15617 311 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 TMEM268Q5VZI3 342 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 LYZL2Q7Z4W2 148 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 ZNF695Q8IW36 515 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 GALNT11Q8NCW6 608 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 MRPL30Q8TCC3 161 aaKnown RBP7.04□□□□□ -1.28
VAMP3-201ENST00000054666 GLYATL2Q8WU03 294 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 ARL11Q969Q4 196 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 MSI2Q96DH6 328 aaKnown RBP7.04□□□□□ -1.28
VAMP3-201ENST00000054666 KIRREL1Q96J84 757 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 C18orf12Q96KH6 178 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 DMRTA2Q96SC8 542 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 BARX1Q9HBU1 254 aaPredicted RBP7.04□□□□□ -1.28
VAMP3-201ENST00000054666 CYTL1Q9NRR1 136 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 DLL3Q9NYJ7 618 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 PCDHB10Q9UN67 800 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 PROCRQ9UNN8 238 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 CACNA1GO43497 2377 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 SHANK1Q9Y566 2161 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 CELSR3Q9NYQ7 3312 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 TRAV24A0A0B4J272 114 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 RHBDL1O75783 438 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 SCO1O75880 301 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 IGKV3-15P01624 115 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 GLI4P10075 376 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 ERVS71-1P61550 626 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 TCF15Q12870 199 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 TBC1D26Q86UD7 250 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 SLC35G3Q8N808 338 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 SCCPDHQ8NBX0 429 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 OR10J5Q8NHC4 309 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 NARS2Q96I59 477 aaKnown RBP7.04□□□□□ -1.28
VAMP3-201ENST00000054666 TP53RKQ96S44 253 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 SLX1AQ9BQ83 275 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 TMEM222Q9H0R3 208 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 TAF9BQ9HBM6 251 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 OBP2BQ9NPH6 170 aa7.04□□□□□ -1.28
VAMP3-201ENST00000054666 ESPL1Q14674 2120 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 DUXBA0A1W2PPF3 345 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 NUDT19A8MXV4 375 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 LGALS8O00214 317 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 SIRPB1O00241 398 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 HSD17B6O14756 317 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 ST8SIA3O43173 380 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 WDR1O75083 606 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 TUSC2O75896 110 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 JTBO76095 146 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 CDS2O95674 445 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 MBPP02686 304 aaPredicted RBP7.03□□□□□ -1.28
VAMP3-201ENST00000054666 GAPDHP04406 335 aaKnown RBP7.03□□□□□ -1.28
VAMP3-201ENST00000054666 GNRHRP30968 328 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 ZNF154Q13106 437 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 GNMTQ14749 295 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 HERPUD1Q15011 391 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 UQCC3Q6UW78 93 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 ZNF818PQ6ZRF7 136 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 GAPTQ8N292 157 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.03□□□□□ -1.28
VAMP3-201ENST00000054666 KLF14Q8TD94 323 aaPredicted RBP7.03□□□□□ -1.28
VAMP3-201ENST00000054666 MARC2Q969Z3 335 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 CABLES2Q9BTV7 478 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 BCL2L14Q9BZR8 327 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 TREM2Q9NZC2 230 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms