RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 PPP1R1CQ8WVI7 109 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 IGLV3-9A0A075B6K5 115 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 C16orf97H3BN30 126 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 ARPC5O15511 151 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 DIRAS3O95661 229 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 SCTP09683 121 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 S100A11P31949 105 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 CCKARP32238 428 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 CFHR2P36980 270 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 RBMXP38159 391 aaKnown RBP12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 KCNJ3P48549 501 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 PIGPP57054 158 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 HERPUD1Q15011 391 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 MSMPQ1L6U9 139 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 PAN3Q58A45 887 aaKnown RBP12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 WDR82Q6UXN9 313 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 ZNF497Q6ZNH5 498 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 FAM185AQ8N0U4 392 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 LILRB4Q8NHJ6 448 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 PRR7Q8TB68 274 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 SEC22AQ96IW7 307 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 FAM210AQ96ND0 272 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 VRK1Q99986 396 aaPredicted RBP12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 CABLES2Q9BTV7 478 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 NAA60Q9H7X0 242 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 SEBOXQ9HB31 216 aaPredicted RBP12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 TMEM165Q9HC07 324 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 C1orf123Q9NWV4 160 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 PCDHB10Q9UN67 800 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 KCNIP3Q9Y2W7 256 aa12.11□□□□□ -0.47
RTFDC1-201ENST00000023939 TRBV6-7A0A0A0MS04 114 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 TEX13DA0A0J9YY54 714 aaPredicted RBP12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 C5orf51A6NDU8 294 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 NPIPB11E5RHQ5 1161 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 HSPB6O14558 160 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 IFNA7P01567 189 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 RND3P61587 244 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 IL15RAQ13261 267 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 ZNF345Q14585 488 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 ABCA11PQ4W5N1 156 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 PRR30Q53SZ7 412 aaPredicted RBP12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 C20orf204Q6ZNR8 217 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 TMUB2Q71RG4 321 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 SLC7A5P1Q8MH63 180 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 LRTM2Q8N967 370 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 CCDC71LQ8N9Z2 235 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 RELL2Q8NC24 303 aaPredicted RBP12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 TMEM171Q8WVE6 324 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 RTN4IP1Q8WWV3 396 aaPredicted RBP12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 TOMM40LQ969M1 308 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 SYT3Q9BQG1 590 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 SUCNR1Q9BXA5 334 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 MFFQ9GZY8 342 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 MSL2Q9HCI7 577 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 SLC2A9Q9NRM0 540 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 RASL12Q9NYN1 266 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 GLS2Q9UI32 602 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 FZR1Q9UM11 496 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 TNFSF18Q9UNG2 199 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 SPTBN2O15020 2390 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 ESPL1Q14674 2120 aa12.1□□□□□ -0.47
RTFDC1-201ENST00000023939 IGKV1-6A0A0C4DH72 117 aa12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 A0A0D9SG52 128 aa12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 FAM25EA8MYX2 175 aa12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 HAND1O96004 215 aa12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 CD40P25942 277 aa12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 PSMB6P28072 239 aa12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 FXYD4P59646 89 aa12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 HLA-DRB3P79483 266 aa12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 PCSK4Q6UW60 755 aa12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 ACP7Q6ZNF0 438 aa12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 ZNF546Q86UE3 836 aa12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 LDLRAD3Q86YD5 345 aa12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 NUP37Q8NFH4 326 aa12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 OR10Z1Q8NGY1 313 aa12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 C2orf50Q96LR7 162 aa12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 DMRTA2Q96SC8 542 aa12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 VKORC1Q9BQB6 163 aa12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 MBNL3Q9NUK0 354 aaKnown RBP12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 WIPI2Q9Y4P8 454 aa12.09□□□□□ -0.47
RTFDC1-201ENST00000023939 IFNL4K9M1U5 179 aa12.08□□□□□ -0.47
RTFDC1-201ENST00000023939 ADAP1O75689 374 aa12.08□□□□□ -0.47
RTFDC1-201ENST00000023939 OR2F2O95006 317 aa12.08□□□□□ -0.47
RTFDC1-201ENST00000023939 ZNF205O95201 554 aa12.08□□□□□ -0.47
RTFDC1-201ENST00000023939 KLF3P57682 345 aaPredicted RBP12.08□□□□□ -0.47
RTFDC1-201ENST00000023939 OR2F1Q13607 317 aa12.08□□□□□ -0.47
RTFDC1-201ENST00000023939 TMEM187Q14656 261 aa12.08□□□□□ -0.47
RTFDC1-201ENST00000023939 FAM90A1Q86YD7 464 aa12.08□□□□□ -0.47
RTFDC1-201ENST00000023939 PTPRQQ9UMZ3 2332 aa12.08□□□□□ -0.48
RTFDC1-201ENST00000023939 C13orf42A0A1B0GVH6 325 aa12.08□□□□□ -0.48
RTFDC1-201ENST00000023939 A6NLC8 198 aa12.08□□□□□ -0.48
RTFDC1-201ENST00000023939 C3orf80F5H4A9 247 aa12.08□□□□□ -0.48
RTFDC1-201ENST00000023939 SIRPB1O00241 398 aa12.08□□□□□ -0.48
RTFDC1-201ENST00000023939 LYL1P12980 280 aa12.08□□□□□ -0.48
RTFDC1-201ENST00000023939 HTR2BP41595 481 aa12.08□□□□□ -0.48
RTFDC1-201ENST00000023939 SMIM21Q3B7S5 101 aa12.08□□□□□ -0.48
RTFDC1-201ENST00000023939 PRAMEF6Q5VXH4 476 aa12.08□□□□□ -0.48
RTFDC1-201ENST00000023939 ZNF826PQ6ZT77 177 aa12.08□□□□□ -0.48
RTFDC1-201ENST00000023939 C22orf34Q6ZV56 151 aa12.08□□□□□ -0.48
RTFDC1-201ENST00000023939 KCNRGQ8N5I3 272 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms