RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Aspscr1Q8VBT9 550 aa19.62■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Olfr734Q8VFT4 313 aa19.62■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Mrpl13Q9D1P0 178 aaKnown RBP19.62■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Rpl7l1Q9D8M4 246 aaKnown RBP19.62■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Olfr721-ps1A0A140T8T9 324 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Wisp3D3Z5L9 354 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Gm21981D3Z6Q6 369 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Sh2b3O09039 548 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Alox12bO70582 701 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 TgfaP48030 159 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Gm1527Q3V0P3 650 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Klf3Q60980 344 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Sult1c1Q80VR3 304 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 NelfaQ8BG30 530 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 PcgF3Q8BTQ0 241 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 SrrdQ8K2M3 249 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Mitd1Q8VDV8 249 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 1700029P11RikQ9CQ68 150 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 GlceQ9EPS3 618 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Vmn1r41Q9EQ44 310 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Stard10Q9JMD3 291 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Ubl3Q9Z2M6 117 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Olfr1130A0A1L1SQT2 314 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 D7Ertd443eD2J0Y4 644 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Gm5901D3YVJ1 333 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Vmn1r174E9PYW5 313 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Gm21783J3QM57 227 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Gm17026K7N6Z0 213 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Pnliprp2P17892 482 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Pou2f1P25425 770 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 H2-T22Q31615 379 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 St8sia4Q64692 359 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 NarflQ7TMW6 476 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Prss33Q80WM7 277 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Mgat4aQ812G0 535 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 SccpdhQ8R127 429 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Vmn1r8Q8R2C2 303 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Gpn1Q8VCE2 372 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Itfg2Q91WI7 443 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Sntg1Q925E1 517 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Nubp2Q9R061 275 aa19.61■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Olfr1255A2AUA4 310 aa19.6■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Btbd35f28A2CFD5 498 aa19.6■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Ca2P00920 260 aaKnown RBP19.6■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Hoxb2P0C1T1 354 aa19.6■□□□□ 0.73
Scn1b-201ENSMUST00000098548 ApelaP0DMC4 54 aa19.6■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Apoc1P34928 88 aa19.6■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Rras2P62071 204 aa19.6■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Fbxw16Q497Z0 464 aa19.6■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Pld6Q5SWZ9 221 aa19.6■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Cacul1Q8R0X2 377 aa19.6■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Duoxa1Q8VE49 341 aa19.6■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Olfr1110Q8VG38 312 aa19.6■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Q9CQT6 229 aa19.6■□□□□ 0.73
Scn1b-201ENSMUST00000098548 2410137M14RikQ9CWF0 162 aa19.6■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Bap18Q9DCT6 171 aa19.6■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Rp2Q9EPK2 347 aa19.6■□□□□ 0.73
Scn1b-201ENSMUST00000098548 P2ry14Q9ESG6 338 aa19.6■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Gpr31F8VQN3 319 aa19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Zmat3O54836 290 aaKnown RBP19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 P01655 112 aa19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Apobec4Q497M3 374 aa19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Dact2Q7TN08 757 aa19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 MastlQ8C0P0 865 aa19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Vmn1r19Q8R2C7 308 aa19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Tmem144Q8VEH0 348 aa19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Olfr1309Q8VF83 320 aa19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Olfr837Q8VFJ4 312 aa19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Olfr815Q8VFU0 316 aa19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 TipinQ91WA1 278 aa19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Uxs1Q91XL3 420 aa19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Bcl7bQ921K9 202 aa19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Slc33a1Q99J27 550 aa19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 SlirpQ9D8T7 112 aaKnown RBP19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Cldnd2Q9D9H2 167 aa19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Elp4Q9ER73 422 aa19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Htr6Q9R1C8 440 aa19.59■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Flg2Q2VIS4 2362 aa19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Pcdhgb8A0A140LI48 931 aa19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Gm10439A2AJU2 433 aaKnown RBP19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Olfr1214A2ATG3 311 aa19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Plscr5J3QM92 274 aa19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Smim18J3QNP2 93 aa19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Zfp13P10754 512 aa19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Hist1h1cP15864 212 aa19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 B3gat2P59270 324 aa19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Taf9bQ6NZA9 249 aa19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Olfr1126Q7TR49 314 aa19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Olfr1061Q7TR72 313 aa19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Olfr890Q7TRD9 314 aa19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Clvs2Q8BG92 327 aa19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Cnot4Q8BT14 575 aaKnown RBP19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Exosc6Q8BTW3 273 aa19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Pga5Q9D106 387 aa19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 1700025F22RikQ9D9Y7 111 aa19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 PthQ9Z0L6 115 aa19.58■□□□□ 0.73
Scn1b-201ENSMUST00000098548 Esp16A8R0U9 85 aa19.57■□□□□ 0.72
Scn1b-201ENSMUST00000098548 Gm9493F6SVV1 192 aaKnown RBP19.57■□□□□ 0.72
Scn1b-201ENSMUST00000098548 H2-Ab1P01921 265 aa19.57■□□□□ 0.72
Scn1b-201ENSMUST00000098548 HhexP43120 271 aa19.57■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 84.3 ms