RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Olfr1477Q7TQQ7 315 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Slc16a13Q8CE94 428 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 C1ql2Q8CFR0 287 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Pomt1Q8R2R1 746 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Nfam1Q8R4V1 264 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Calhm2Q8VEC4 323 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Olfr497Q8VG08 314 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Tm4sf5Q91XF2 196 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Rtn4rQ99PI8 473 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Teddm3Q9CQH1 294 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Snu13Q9D0T1 128 aaKnown RBP13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 P2ry4Q9JJS7 361 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gm10269G3UWD7 123 aa13.19□□□□□ -0.3
Nup54-201ENSMUST00000038514 Rnf148G3X9R7 316 aa13.19□□□□□ -0.3
Nup54-201ENSMUST00000038514 Dusp1P28563 367 aa13.19□□□□□ -0.3
Nup54-201ENSMUST00000038514 Olfr125Q14AJ9 320 aa13.19□□□□□ -0.3
Nup54-201ENSMUST00000038514 Tex30Q3TUU5 225 aa13.19□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gm7534Q3UU21 679 aa13.19□□□□□ -0.3
Nup54-201ENSMUST00000038514 Ewsr1Q61545 655 aaKnown RBP13.19□□□□□ -0.3
Nup54-201ENSMUST00000038514 Fam117aQ7TNF9 451 aa13.19□□□□□ -0.3
Nup54-201ENSMUST00000038514 Actrt3Q8BXF8 369 aa13.19□□□□□ -0.3
Nup54-201ENSMUST00000038514 Fam169bQ8CHT6 337 aa13.19□□□□□ -0.3
Nup54-201ENSMUST00000038514 Znf768Q8R0T2 568 aa13.19□□□□□ -0.3
Nup54-201ENSMUST00000038514 Tmem234Q8R1E7 140 aa13.19□□□□□ -0.3
Nup54-201ENSMUST00000038514 Fcrl1Q8R4Y0 343 aa13.19□□□□□ -0.3
Nup54-201ENSMUST00000038514 Masp2Q91WP0 685 aa13.19□□□□□ -0.3
Nup54-201ENSMUST00000038514 Yif1aQ91XB7 293 aa13.19□□□□□ -0.3
Nup54-201ENSMUST00000038514 Brinp1Q920P3 760 aa13.19□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gjc3Q921C1 269 aa13.19□□□□□ -0.3
Nup54-201ENSMUST00000038514 Cpn1Q9JJN5 457 aa13.19□□□□□ -0.3
Nup54-201ENSMUST00000038514 Trav12n-2A0A075B626 113 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gm4858A0A0A6YWS7 318 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Igf2P09535 180 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Mrgprb2Q3KNA1 338 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Zdhhc8Q5Y5T5 762 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 BC061237Q6P8I2 184 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gpr135Q7TQP2 457 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Mfsd8Q8BH31 519 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Plppr5Q8BJ52 321 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Vmn1r235Q8R297 328 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Olfr133Q8VG94 312 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Olfr340Q8VGL0 312 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Il36bQ9D6Z6 183 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Alkbh4Q9D8F1 300 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Olfr930Q9EQ99 308 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Olfr957Q9EQB7 311 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Enpp5Q9EQG7 477 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Cln8Q9QUK3 288 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gm15130F6PYN5 206 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gm8020F6WLE9 229 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Fbxw25F7C9P2 466 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gm21783J3QM57 227 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Amy1P00687 511 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Igsf11P0C673 428 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Id4P41139 161 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Oprm1P42866 398 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Egr3P43300 387 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 A3galt2Q3V1N9 370 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Nkain2Q4PNJ2 208 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 NelfaQ8BG30 530 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Tm2d3Q8BJ83 261 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Cypt1Q8CH20 168 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Alg12Q8VDB2 486 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Rbm39Q8VH51 530 aaKnown RBP13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 MynnQ99MD8 610 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Ms4a4dQ99N05 225 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Tmem33Q9CR67 247 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Csnk1eQ9JMK2 416 aaKnown RBP13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Mapk7Q9WVS8 806 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 ChrdQ9Z0E2 948 aa13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Trip12G5E870 2025 aaKnown RBP13.18□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gm21488A0A087WR99 222 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Igkv6-25A0A140T8N7 115 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gm2026A2ART4 498 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gm15821A6X8J8 139 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gm9047B9EJX3 177 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gprin2D3Z1D7 455 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Meox2P32443 303 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gabrr1P56475 480 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Eif5aP63242 154 aaKnown RBP13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Bahd1Q497V6 772 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gm12258Q5NC63 627 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Zfp819Q80V81 607 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Rnf122Q8BP31 155 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Plekha1Q8BUL6 383 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Entpd8Q8K0L2 497 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Olfr1411Q8VFC4 323 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Olfr60Q8VGL4 311 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Lnx2Q91XL2 687 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 PecrQ99MZ7 303 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Lipt2Q9D009 231 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Asb5Q9D1A4 329 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 TinagQ9WUR0 475 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Mki67E9PVX6 3177 aaKnown RBP13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Ralgapa1Q6GYP7 2035 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 CymB7ZWD6 379 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Ccdc74aE9Q9U8 364 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Cd200O54901 278 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Saa2P05367 122 aa13.17□□□□□ -0.3
Nup54-201ENSMUST00000038514 Znf271P15620 580 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms