RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 AdaP03958 352 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Hist1h2bmP10854 126 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Rab5cP35278 216 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Gramd2aQ3V3G7 320 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Hist1h2bhQ64478 126 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Hist2h2bbQ64525 126 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Hist1h2bcQ6ZWY9 126 aaKnown RBP14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Slc35d3Q8BGF8 422 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 GldnQ8BMF8 549 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Mr1Q8HWB0 341 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Cd226Q8K4F0 333 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Dok5Q91ZM9 306 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Cbln3Q9JHG0 197 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Rcl1Q9JJT0 373 aaKnown RBP14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Susd5G3UW60 619 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Syt3O35681 587 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 P2ry1P49650 373 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Eif5aP63242 154 aaKnown RBP14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 ShbgP97497 403 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Gm21093Q6GQS8 569 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Cstl1Q80Y72 140 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Q8BN57 294 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Olfr827Q8VEV5 322 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Olfr133Q8VG94 312 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 S100a16Q9D708 124 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Srp19Q9D7A6 144 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Fbln5Q9WVH9 448 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Col5a1O88207 1838 aa14.85□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Gm5407E9Q7Q1 248 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Znf271P15620 580 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 TspoP50637 169 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Hist1h3bP84228 136 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Gm7534Q3UU21 679 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Sox19Q62249 55 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Stoml3Q6PE84 287 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Slc17a5Q8BN82 495 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Elfn1Q8C8T7 828 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Syngr3Q8R191 229 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Brinp1Q920P3 760 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 DohhQ99LN9 302 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Herpud2Q9JJC9 404 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Cx3cr1Q9Z0D9 354 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 FggyA2AJL3 552 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Vmn1r175K7N6T9 304 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 HbzP06467 142 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Atp4bP50992 294 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 AccslQ3UX83 580 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Arg1Q61176 323 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Cfap161Q6P8Y0 303 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Olfr527Q7TRT9 305 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Adhfe1Q8R0N6 465 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Olfr510Q8VEW6 314 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Olfr825Q8VFU7 320 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Cabin1G3X8Q1 2187 aaKnown RBP14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Cyb561d1A2AE42 229 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Samt1A2BED8 237 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Gm15140A2BEE3 237 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Gm21761J3QK00 171 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 P06336 421 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 MgmtP26187 211 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Rab3cP62823 227 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Sult4a1P63046 284 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 UcnP81615 122 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Aqp11Q8BHH1 271 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Hs3st3a1Q8BKN6 393 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Zim1Q8C393 579 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 SpartQ8R1X6 671 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Vmn1r28Q8R2C9 302 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Olfr1378Q8VGH0 315 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Q9D1F3 157 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 OcstampQ9D611 498 aa14.84□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Gm13547A2ARC0 163 aa14.83□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Olfr125Q14AJ9 320 aa14.83□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Olfr988Q7TRA1 309 aa14.83□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Wdyhv1Q80WB5 209 aa14.83□□□□□ -0.03
Ctcf-201ENSMUST00000005841 9930022D16RikQ8BG27 128 aa14.83□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Acsm5Q8BGA8 578 aa14.83□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Commd2Q8BXC6 199 aa14.83□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Supt7lQ9CZV5 412 aa14.83□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Rnase6Q9D244 153 aa14.83□□□□□ -0.03
Ctcf-201ENSMUST00000005841 Dpep3Q9DA79 493 aa14.83□□□□□ -0.03
Ctcf-201ENSMUST00000005841 RabggtbP53612 339 aa14.83□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Gm826Q3UQ74 109 aa14.83□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Nkain3Q3URJ8 181 aa14.83□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Eddm3bQ8K0E4 149 aa14.83□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Exosc2Q8VBV3 293 aaKnown RBP14.83□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Calhm2Q8VEC4 323 aa14.83□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Siglec5Q920G3 569 aa14.83□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Ubqln4Q99NB8 596 aa14.83□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Cuzd1P70412 606 aa14.83□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Sys1Q78S06 156 aa14.83□□□□□ -0.04
Ctcf-201ENSMUST00000005841 2610318N02RikQ80VT5 305 aa14.83□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Fam53bQ8BGR5 422 aa14.83□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Cacul1Q8R0X2 377 aa14.83□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Tm6sf2Q8R1J1 378 aa14.83□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Alg12Q8VDB2 486 aa14.83□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Uqcc1Q9CWU6 295 aa14.83□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Kti12Q9D1R2 351 aa14.83□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Q9D9C7 252 aa14.83□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Prss1Q9Z1R9 246 aa14.83□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms