RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C ALG12P53730 551 aa3.92□□□□□ -1.78
UBX4YMR067C YDL086WQ07505 273 aa3.92□□□□□ -1.78
UBX4YMR067C VHS3Q08438 674 aa3.92□□□□□ -1.78
UBX4YMR067C NOP14Q99207 810 aaKnown RBP3.92□□□□□ -1.78
UBX4YMR067C FRS1P15624 595 aaKnown RBP3.91□□□□□ -1.78
UBX4YMR067C ORC2P32833 620 aa3.91□□□□□ -1.78
UBX4YMR067C APL3P38065 1025 aa3.91□□□□□ -1.78
UBX4YMR067C RET2P43621 546 aa3.91□□□□□ -1.78
UBX4YMR067C BFA1P47113 574 aa3.91□□□□□ -1.78
UBX4YMR067C RFX1P48743 811 aa3.91□□□□□ -1.78
UBX4YMR067C VBA4Q04602 768 aaKnown RBP3.91□□□□□ -1.78
UBX4YMR067C HOF1Q05080 669 aa3.91□□□□□ -1.78
UBX4YMR067C VPS36Q06696 566 aa3.91□□□□□ -1.78
UBX4YMR067C VPS34P22543 875 aa3.9□□□□□ -1.79
UBX4YMR067C PRP22P24384 1145 aaKnown RBP3.9□□□□□ -1.79
UBX4YMR067C IMG2P25642 146 aaPredicted RBP3.9□□□□□ -1.79
UBX4YMR067C SFP1P32432 683 aa3.9□□□□□ -1.79
UBX4YMR067C KSP1P38691 1029 aaKnown RBP3.9□□□□□ -1.79
UBX4YMR067C KHA1P40309 873 aa3.9□□□□□ -1.79
UBX4YMR067C YIL077CP40508 320 aa3.9□□□□□ -1.79
UBX4YMR067C SNM1P40993 198 aa3.9□□□□□ -1.79
UBX4YMR067C SDA1P53313 767 aaKnown RBP3.9□□□□□ -1.79
UBX4YMR067C SPC98P53540 846 aa3.9□□□□□ -1.79
UBX4YMR067C PPN1Q04119 674 aa3.9□□□□□ -1.79
UBX4YMR067C UTP14Q04500 899 aaKnown RBP3.9□□□□□ -1.79
UBX4YMR067C MRI1Q06489 411 aaKnown RBP3.9□□□□□ -1.79
UBX4YMR067C YFT2Q06676 274 aa3.9□□□□□ -1.79
UBX4YMR067C RPS9BP05755 195 aaKnown RBP3.89□□□□□ -1.79
UBX4YMR067C RPL8AP17076 256 aaKnown RBP3.89□□□□□ -1.79
UBX4YMR067C PPG1P32838 368 aa3.89□□□□□ -1.79
UBX4YMR067C COS111P38308 924 aa3.89□□□□□ -1.79
UBX4YMR067C RNH70P53331 553 aa3.89□□□□□ -1.79
UBX4YMR067C YMR210WQ03649 449 aa3.89□□□□□ -1.79
UBX4YMR067C SLK19Q08581 821 aaKnown RBP3.89□□□□□ -1.79
UBX4YMR067C RKI1Q12189 258 aa3.89□□□□□ -1.79
UBX4YMR067C MSS1P32559 526 aaPredicted RBP3.88□□□□□ -1.79
UBX4YMR067C YKU70P32807 602 aa3.88□□□□□ -1.79
UBX4YMR067C YMC2P38087 329 aa3.88□□□□□ -1.79
UBX4YMR067C TDA3P38758 523 aa3.88□□□□□ -1.79
UBX4YMR067C NMD2P38798 1089 aaKnown RBP3.88□□□□□ -1.79
UBX4YMR067C YHR097CP38809 366 aaKnown RBP3.88□□□□□ -1.79
UBX4YMR067C CKB2P38930 258 aa3.88□□□□□ -1.79
UBX4YMR067C PMT6P42934 759 aa3.88□□□□□ -1.79
UBX4YMR067C SPO1P53541 631 aa3.88□□□□□ -1.79
UBX4YMR067C UFO1Q04511 668 aa3.88□□□□□ -1.79
UBX4YMR067C THI7Q05998 598 aa3.88□□□□□ -1.79
UBX4YMR067C YLR407WQ06070 228 aa3.88□□□□□ -1.79
UBX4YMR067C PHO5P00635 467 aa3.87□□□□□ -1.79
UBX4YMR067C SWI6P09959 803 aa3.87□□□□□ -1.79
UBX4YMR067C HOM2P13663 365 aaKnown RBP3.87□□□□□ -1.79
UBX4YMR067C RPA135P22138 1203 aaKnown RBP3.87□□□□□ -1.79
UBX4YMR067C SAT4P25333 603 aaKnown RBP3.87□□□□□ -1.79
UBX4YMR067C MNN1P39106 762 aa3.87□□□□□ -1.79
UBX4YMR067C MIT1P40002 666 aa3.87□□□□□ -1.79
UBX4YMR067C PXA1P41909 870 aa3.87□□□□□ -1.79
UBX4YMR067C YDR179W-AQ03983 463 aa3.87□□□□□ -1.79
UBX4YMR067C IZH3Q07959 543 aa3.87□□□□□ -1.79
UBX4YMR067C LAM4P38800 1345 aa3.87□□□□□ -1.79
UBX4YMR067C IME1P21190 360 aa3.86□□□□□ -1.79
UBX4YMR067C UGP1P32861 499 aaKnown RBP3.86□□□□□ -1.79
UBX4YMR067C SNF12P53628 566 aa3.86□□□□□ -1.79
UBX4YMR067C DAK1P54838 584 aaKnown RBP3.86□□□□□ -1.79
UBX4YMR067C NGL2Q03264 515 aaKnown RBP3.86□□□□□ -1.79
UBX4YMR067C RCR2Q03446 210 aaKnown RBP3.86□□□□□ -1.79
UBX4YMR067C SEG1Q04279 960 aa3.86□□□□□ -1.79
UBX4YMR067C OSW1Q08692 278 aa3.86□□□□□ -1.79
UBX4YMR067C MDM20Q12387 796 aaKnown RBP3.86□□□□□ -1.79
UBX4YMR067C TPK2P06245 380 aa3.85□□□□□ -1.79
UBX4YMR067C PMC1P38929 1173 aaPredicted RBP3.85□□□□□ -1.79
UBX4YMR067C CCT5P40413 562 aaKnown RBP3.85□□□□□ -1.79
UBX4YMR067C YJR096WP47137 282 aa3.85□□□□□ -1.79
UBX4YMR067C NMA2P53204 395 aa3.85□□□□□ -1.79
UBX4YMR067C DIP5P53388 608 aa3.85□□□□□ -1.79
UBX4YMR067C FDC1Q03034 503 aa3.85□□□□□ -1.79
UBX4YMR067C NSE5Q03718 556 aa3.85□□□□□ -1.79
UBX4YMR067C HLR1Q04429 423 aa3.85□□□□□ -1.79
UBX4YMR067C AFT2Q08957 416 aa3.85□□□□□ -1.79
UBX4YMR067C STE12P13574 688 aa3.84□□□□□ -1.79
UBX4YMR067C MDM10P18409 493 aa3.84□□□□□ -1.79
UBX4YMR067C BUD8P41698 603 aa3.84□□□□□ -1.79
UBX4YMR067C GZF3P42944 551 aaKnown RBP3.84□□□□□ -1.79
UBX4YMR067C YGR153WP48238 217 aa3.84□□□□□ -1.79
UBX4YMR067C ASN1P49089 572 aaKnown RBP3.84□□□□□ -1.79
UBX4YMR067C CEF1Q03654 590 aaPredicted RBP3.84□□□□□ -1.79
UBX4YMR067C YPS7Q06325 596 aa3.84□□□□□ -1.79
UBX4YMR067C RPS17AP02407 136 aaKnown RBP3.83□□□□□ -1.8
UBX4YMR067C ADE5,7P07244 802 aaKnown RBP3.83□□□□□ -1.8
UBX4YMR067C RPS17BP14127 136 aaKnown RBP3.83□□□□□ -1.8
UBX4YMR067C PRP19P32523 503 aaKnown RBP3.83□□□□□ -1.8
UBX4YMR067C ELF1P36053 145 aa3.83□□□□□ -1.8
UBX4YMR067C LTP1P40347 161 aa3.83□□□□□ -1.8
UBX4YMR067C NOP15P53927 220 aaPredicted RBP3.83□□□□□ -1.8
UBX4YMR067C FMP30Q02883 468 aa3.83□□□□□ -1.8
UBX4YMR067C RIM13Q03792 727 aa3.83□□□□□ -1.8
UBX4YMR067C ULA1Q12059 462 aa3.83□□□□□ -1.8
UBX4YMR067C APM4Q99186 491 aa3.83□□□□□ -1.8
UBX4YMR067C ADR1P07248 1323 aa3.82□□□□□ -1.8
UBX4YMR067C THI6P41835 540 aa3.82□□□□□ -1.8
UBX4YMR067C IES1P43579 692 aa3.82□□□□□ -1.8
UBX4YMR067C ATG36P46983 293 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 1630.8 ms