RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 RASSF10A6NK89 507 aa18.72■□□□□ 0.59
PHGDH-231ENST00000641939 SRGAP3O43295 1099 aa18.72■□□□□ 0.59
PHGDH-231ENST00000641939 IFIT1P09914 478 aaKnown RBP18.72■□□□□ 0.59
PHGDH-231ENST00000641939 FGFR2P21802 821 aa18.72■□□□□ 0.59
PHGDH-231ENST00000641939 MTX1Q13505 466 aa18.72■□□□□ 0.59
PHGDH-231ENST00000641939 CAVIN4Q5BKX8 364 aa18.72■□□□□ 0.59
PHGDH-231ENST00000641939 ANGEL2Q5VTE6 544 aaKnown RBP18.72■□□□□ 0.59
PHGDH-231ENST00000641939 SULF1Q8IWU6 871 aa18.72■□□□□ 0.59
PHGDH-231ENST00000641939 PA2G4Q9UQ80 394 aaKnown RBP18.72■□□□□ 0.59
PHGDH-231ENST00000641939 JAG2Q9Y219 1238 aa18.72■□□□□ 0.59
PHGDH-231ENST00000641939 ADM5C9JUS6 153 aa18.71■□□□□ 0.59
PHGDH-231ENST00000641939 IL15P40933 162 aaPredicted RBP18.71■□□□□ 0.59
PHGDH-231ENST00000641939 DEFB115Q30KQ5 88 aa18.71■□□□□ 0.59
PHGDH-231ENST00000641939 NBPF9Q3BBW0 867 aa18.71■□□□□ 0.59
PHGDH-231ENST00000641939 LPIN2Q92539 896 aa18.71■□□□□ 0.59
PHGDH-231ENST00000641939 ZNF408Q9H9D4 720 aa18.71■□□□□ 0.59
PHGDH-231ENST00000641939 CEP126Q9P2H0 1117 aa18.71■□□□□ 0.59
PHGDH-231ENST00000641939 ECM29Q5VYK3 1845 aa18.71■□□□□ 0.59
PHGDH-231ENST00000641939 PITPNM2Q9BZ72 1349 aa18.71■□□□□ 0.59
PHGDH-231ENST00000641939 WNT10BO00744 389 aa18.7■□□□□ 0.58
PHGDH-231ENST00000641939 RLBP1P12271 317 aa18.7■□□□□ 0.58
PHGDH-231ENST00000641939 SLC5A1P13866 664 aa18.7■□□□□ 0.58
PHGDH-231ENST00000641939 DLK2Q6UY11 383 aa18.7■□□□□ 0.58
PHGDH-231ENST00000641939 ITPRIPQ8IWB1 547 aa18.7■□□□□ 0.58
PHGDH-231ENST00000641939 TLL2Q9Y6L7 1015 aa18.7■□□□□ 0.58
PHGDH-231ENST00000641939 F8W031 263 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-231ENST00000641939 VEGFBP49765 207 aa18.69■□□□□ 0.58
PHGDH-231ENST00000641939 BCAMP50895 628 aa18.69■□□□□ 0.58
PHGDH-231ENST00000641939 MFSD14BQ5SR56 506 aa18.69■□□□□ 0.58
PHGDH-231ENST00000641939 FRAT2O75474 233 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-231ENST00000641939 SAPCD2Q86UD0 394 aa18.68■□□□□ 0.58
PHGDH-231ENST00000641939 IQSEC3Q9UPP2 1182 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-231ENST00000641939 DLGAP5Q15398 846 aa18.67■□□□□ 0.58
PHGDH-231ENST00000641939 ATP2B3Q16720 1220 aa18.67■□□□□ 0.58
PHGDH-231ENST00000641939 MTMR14Q8NCE2 650 aa18.67■□□□□ 0.58
PHGDH-231ENST00000641939 ZBED3Q96IU2 234 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-231ENST00000641939 PNMA6EA0A0J9YXQ4 647 aa18.66■□□□□ 0.58
PHGDH-231ENST00000641939 ZBTB7BO15156 539 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-231ENST00000641939 MS4A1P11836 297 aa18.66■□□□□ 0.58
PHGDH-231ENST00000641939 CHAF1AQ13111 956 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-231ENST00000641939 PAXIP1Q6ZW49 1069 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-231ENST00000641939 PANK1Q8TE04 598 aa18.66■□□□□ 0.58
PHGDH-231ENST00000641939 TBC1D22AQ8WUA7 517 aa18.66■□□□□ 0.58
PHGDH-231ENST00000641939 CDCA5Q96FF9 252 aa18.66■□□□□ 0.58
PHGDH-231ENST00000641939 RCAN3Q9UKA8 241 aa18.66■□□□□ 0.58
PHGDH-231ENST00000641939 WDR33Q9C0J8 1336 aaKnown RBP18.66■□□□□ 0.58
PHGDH-231ENST00000641939 CFAP100Q494V2 611 aa18.65■□□□□ 0.58
PHGDH-231ENST00000641939 GBA2Q9HCG7 927 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-231ENST00000641939 ECE1P42892 770 aa18.64■□□□□ 0.57
PHGDH-231ENST00000641939 IFFO2Q5TF58 517 aa18.64■□□□□ 0.57
PHGDH-231ENST00000641939 APOBEC3FQ8IUX4 373 aaKnown RBP18.64■□□□□ 0.57
PHGDH-231ENST00000641939 C2orf69Q8N8R5 385 aa18.64■□□□□ 0.57
PHGDH-231ENST00000641939 HHIPL1Q96JK4 782 aa18.64■□□□□ 0.57
PHGDH-231ENST00000641939 CAPNS2Q96L46 248 aa18.64■□□□□ 0.57
PHGDH-231ENST00000641939 C1orf115Q9H7X2 142 aa18.64■□□□□ 0.57
PHGDH-231ENST00000641939 TTF2Q9UNY4 1162 aaKnown RBP18.64■□□□□ 0.57
PHGDH-231ENST00000641939 SCAF8Q9UPN6 1271 aaKnown RBP18.64■□□□□ 0.57
PHGDH-231ENST00000641939 SPDYE2BA6NHP3 402 aa18.63■□□□□ 0.57
PHGDH-231ENST00000641939 SPDYE6P0CI01 402 aa18.63■□□□□ 0.57
PHGDH-231ENST00000641939 RBM5P52756 815 aaKnown RBP eCLIP18.63■□□□□ 0.57
PHGDH-231ENST00000641939 ATP8B2P98198 1209 aa18.63■□□□□ 0.57
PHGDH-231ENST00000641939 CYP4F22Q6NT55 531 aa18.63■□□□□ 0.57
PHGDH-231ENST00000641939 PCDHAC2Q9Y5I4 1007 aa18.63■□□□□ 0.57
PHGDH-231ENST00000641939 THSD7BQ9C0I4 1608 aa18.63■□□□□ 0.57
PHGDH-231ENST00000641939 MYO1BO43795 1136 aa18.62■□□□□ 0.57
PHGDH-231ENST00000641939 HSPA1AP0DMV8 641 aaKnown RBP18.62■□□□□ 0.57
PHGDH-231ENST00000641939 HSPA1BP0DMV9 641 aaKnown RBP18.62■□□□□ 0.57
PHGDH-231ENST00000641939 HUNKP57058 714 aa18.62■□□□□ 0.57
PHGDH-231ENST00000641939 TFCP2Q12800 502 aa18.62■□□□□ 0.57
PHGDH-231ENST00000641939 GRM1Q13255 1194 aa18.62■□□□□ 0.57
PHGDH-231ENST00000641939 G3BP1Q13283 466 aaKnown RBP eCLIP18.62■□□□□ 0.571e-6■■□□□ 13.6
PHGDH-231ENST00000641939 POLA2Q14181 598 aa18.62■□□□□ 0.57
PHGDH-231ENST00000641939 SSH3Q8TE77 659 aa18.62■□□□□ 0.57
PHGDH-231ENST00000641939 GNL3LQ9NVN8 582 aaKnown RBP18.62■□□□□ 0.57
PHGDH-231ENST00000641939 SERPINA10Q9UK55 444 aa18.62■□□□□ 0.57
PHGDH-231ENST00000641939 AKAP2Q9Y2D5 859 aa18.62■□□□□ 0.57
PHGDH-231ENST00000641939 PAPPA2Q9BXP8 1791 aa18.62■□□□□ 0.57
PHGDH-231ENST00000641939 GRIK5Q16478 980 aa18.61■□□□□ 0.57
PHGDH-231ENST00000641939 PRMT6Q96LA8 375 aaPredicted RBP18.61■□□□□ 0.57
PHGDH-231ENST00000641939 SUGT1Q9Y2Z0 365 aa18.61■□□□□ 0.57
PHGDH-231ENST00000641939 ADORA1P30542 326 aa18.6■□□□□ 0.57
PHGDH-231ENST00000641939 PHKA1P46020 1223 aa18.6■□□□□ 0.57
PHGDH-231ENST00000641939 TIMM10P62072 90 aa18.6■□□□□ 0.57
PHGDH-231ENST00000641939 WDR66Q8TBY9 1149 aa18.6■□□□□ 0.57
PHGDH-231ENST00000641939 COL1A1P02452 1464 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-231ENST00000641939 A0A1B0GUL7 405 aa18.59■□□□□ 0.57
PHGDH-231ENST00000641939 CLRN2A0PK11 232 aa18.59■□□□□ 0.57
PHGDH-231ENST00000641939 CRKP46108 304 aa18.59■□□□□ 0.57
PHGDH-231ENST00000641939 FKBP1BP68106 108 aa18.59■□□□□ 0.57
PHGDH-231ENST00000641939 HDLBPQ00341 1268 aaKnown RBP18.59■□□□□ 0.57
PHGDH-231ENST00000641939 MVPQ14764 893 aaKnown RBP18.59■□□□□ 0.57
PHGDH-231ENST00000641939 PRAMEF18Q5VWM3 479 aa18.59■□□□□ 0.57
PHGDH-231ENST00000641939 CCDC102BQ68D86 513 aa18.59■□□□□ 0.57
PHGDH-231ENST00000641939 MAST3O60307 1309 aa18.58■□□□□ 0.57
PHGDH-231ENST00000641939 SEMA3EO15041 775 aa18.58■□□□□ 0.56
PHGDH-231ENST00000641939 ZBTB22O15209 634 aa18.58■□□□□ 0.56
PHGDH-231ENST00000641939 NF2P35240 595 aa18.58■□□□□ 0.56
PHGDH-231ENST00000641939 TEKT1Q969V4 418 aa18.58■□□□□ 0.56
PHGDH-231ENST00000641939 XAGE2Q96GT9 111 aa18.58■□□□□ 0.56
PHGDH-231ENST00000641939 DEFB129Q9H1M3 183 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms