RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 CRHR2Q13324 411 aa19.24■□□□□ 0.67
SRRM4-204ENST00000641899 CD99L2Q8TCZ2 262 aa19.24■□□□□ 0.67
SRRM4-204ENST00000641899 PLA2G12BQ9BX93 195 aa19.24■□□□□ 0.67
SRRM4-204ENST00000641899 VEZTQ9HBM0 779 aa19.24■□□□□ 0.67
SRRM4-204ENST00000641899 ANKRD18BA2A2Z9 1011 aa19.23■□□□□ 0.67
SRRM4-204ENST00000641899 APAF1O14727 1248 aa19.23■□□□□ 0.67
SRRM4-204ENST00000641899 RBM5P52756 815 aaKnown RBP eCLIP19.23■□□□□ 0.67
SRRM4-204ENST00000641899 CHRNDQ07001 517 aa19.23■□□□□ 0.67
SRRM4-204ENST00000641899 CWF19L2Q2TBE0 894 aaKnown RBP19.23■□□□□ 0.67
SRRM4-204ENST00000641899 CLMNQ96JQ2 1002 aa19.23■□□□□ 0.67
SRRM4-204ENST00000641899 SPDYE2BA6NHP3 402 aa19.22■□□□□ 0.67
SRRM4-204ENST00000641899 SPDYE6P0CI01 402 aa19.22■□□□□ 0.67
SRRM4-204ENST00000641899 CFAP100Q494V2 611 aa19.22■□□□□ 0.67
SRRM4-204ENST00000641899 CLRN2A0PK11 232 aa19.21■□□□□ 0.67
SRRM4-204ENST00000641899 F8W031 263 aaPredicted RBP19.21■□□□□ 0.67
SRRM4-204ENST00000641899 SLC4A8Q2Y0W8 1093 aa19.21■□□□□ 0.67
SRRM4-204ENST00000641899 SLC9C1Q4G0N8 1177 aa19.21■□□□□ 0.67
SRRM4-204ENST00000641899 C15orf52Q6ZUT6 534 aaKnown RBP19.21■□□□□ 0.67
SRRM4-204ENST00000641899 ZFYVE28Q9HCC9 887 aa19.21■□□□□ 0.67
SRRM4-204ENST00000641899 TESPA1A2RU30 521 aaPredicted RBP19.2■□□□□ 0.66
SRRM4-204ENST00000641899 EN2P19622 333 aaPredicted RBP19.2■□□□□ 0.66
SRRM4-204ENST00000641899 KLRK1P26718 216 aa19.2■□□□□ 0.66
SRRM4-204ENST00000641899 IFIT5Q13325 482 aaKnown RBP19.2■□□□□ 0.66
SRRM4-204ENST00000641899 GCKRQ14397 625 aa19.2■□□□□ 0.66
SRRM4-204ENST00000641899 RASA3Q14644 834 aa19.2■□□□□ 0.66
SRRM4-204ENST00000641899 FZD1Q9UP38 647 aa19.2■□□□□ 0.66
SRRM4-204ENST00000641899 CSF1RP07333 972 aa19.19■□□□□ 0.66
SRRM4-204ENST00000641899 IL1R1P14778 569 aa19.19■□□□□ 0.66
SRRM4-204ENST00000641899 KIF22Q14807 665 aa19.19■□□□□ 0.66
SRRM4-204ENST00000641899 NBPF12Q5TAG4 269 aaPredicted RBP19.19■□□□□ 0.66
SRRM4-204ENST00000641899 SLC4A2P04920 1241 aa19.18■□□□□ 0.66
SRRM4-204ENST00000641899 TNNI2P48788 182 aa19.18■□□□□ 0.66
SRRM4-204ENST00000641899 GTF2A2P52657 109 aa19.18■□□□□ 0.66
SRRM4-204ENST00000641899 DDX10Q13206 875 aaKnown RBP19.18■□□□□ 0.66
SRRM4-204ENST00000641899 OPTNQ96CV9 577 aa19.18■□□□□ 0.66
SRRM4-204ENST00000641899 PRMT6Q96LA8 375 aaPredicted RBP19.18■□□□□ 0.66
SRRM4-204ENST00000641899 CSADQ9Y600 493 aa19.18■□□□□ 0.66
SRRM4-204ENST00000641899 USP2O75604 605 aaPredicted RBP19.17■□□□□ 0.66
SRRM4-204ENST00000641899 TAF1CQ15572 869 aaPredicted RBP19.17■□□□□ 0.66
SRRM4-204ENST00000641899 TAF7LQ5H9L4 462 aa19.17■□□□□ 0.66
SRRM4-204ENST00000641899 CERS5Q8N5B7 392 aa19.17■□□□□ 0.66
SRRM4-204ENST00000641899 LINS1Q8NG48 757 aa19.17■□□□□ 0.66
SRRM4-204ENST00000641899 ZNF333Q96JL9 665 aa19.17■□□□□ 0.66
SRRM4-204ENST00000641899 FXR1P51114 621 aaKnown RBP eCLIP19.16■□□□□ 0.66
SRRM4-204ENST00000641899 FKBP5Q13451 457 aaPredicted RBP19.16■□□□□ 0.66
SRRM4-204ENST00000641899 TWISTNBQ3B726 338 aaPredicted RBP19.16■□□□□ 0.66
SRRM4-204ENST00000641899 TSPYL6Q8N831 410 aa19.16■□□□□ 0.66
SRRM4-204ENST00000641899 ELP3Q9H9T3 547 aa19.16■□□□□ 0.66
SRRM4-204ENST00000641899 CHMP3Q9Y3E7 222 aa19.16■□□□□ 0.66
SRRM4-204ENST00000641899 TAF5LO75529 589 aa19.15■□□□□ 0.66
SRRM4-204ENST00000641899 GNRH1P01148 92 aa19.15■□□□□ 0.66
SRRM4-204ENST00000641899 DNAAF4Q8WXU2 420 aa19.15■□□□□ 0.66
SRRM4-204ENST00000641899 HOOK2Q96ED9 719 aa19.15■□□□□ 0.66
SRRM4-204ENST00000641899 SERPINA10Q9UK55 444 aa19.15■□□□□ 0.66
SRRM4-204ENST00000641899 SSC5DA1L4H1 1573 aa19.15■□□□□ 0.66
SRRM4-204ENST00000641899 CCL15-CCL14A0A0B4J2E2 113 aa19.14■□□□□ 0.65
SRRM4-204ENST00000641899 PRMT2P55345 433 aa19.14■□□□□ 0.65
SRRM4-204ENST00000641899 FLIIQ13045 1269 aa19.14■□□□□ 0.65
SRRM4-204ENST00000641899 CCL15Q16663 113 aa19.14■□□□□ 0.65
SRRM4-204ENST00000641899 CCDC57Q2TAC2 916 aa19.14■□□□□ 0.65
SRRM4-204ENST00000641899 PTPN18Q99952 460 aa19.14■□□□□ 0.65
SRRM4-204ENST00000641899 GJA5P36382 358 aa19.13■□□□□ 0.65
SRRM4-204ENST00000641899 MAP3K9P80192 1104 aa19.13■□□□□ 0.65
SRRM4-204ENST00000641899 SPDYE2Q495Y8 402 aa19.13■□□□□ 0.65
SRRM4-204ENST00000641899 HELBQ8NG08 1087 aaPredicted RBP19.13■□□□□ 0.65
SRRM4-204ENST00000641899 ZCCHC17Q9NP64 241 aaKnown RBP19.13■□□□□ 0.65
SRRM4-204ENST00000641899 CNNM1Q9NRU3 951 aa19.13■□□□□ 0.65
SRRM4-204ENST00000641899 MFSD14BQ5SR56 506 aa19.12■□□□□ 0.65
SRRM4-204ENST00000641899 LDHAL6AQ6ZMR3 332 aa19.12■□□□□ 0.65
SRRM4-204ENST00000641899 MS4A4AQ96JQ5 239 aa19.12■□□□□ 0.65
SRRM4-204ENST00000641899 ZNF70Q9UC06 446 aaPredicted RBP19.12■□□□□ 0.65
SRRM4-204ENST00000641899 TTF2Q9UNY4 1162 aaKnown RBP19.12■□□□□ 0.65
SRRM4-204ENST00000641899 COLQQ9Y215 455 aaPredicted RBP19.12■□□□□ 0.65
SRRM4-204ENST00000641899 PTCH2Q9Y6C5 1203 aa19.12■□□□□ 0.65
SRRM4-204ENST00000641899 FAM205AQ6ZU69 1335 aa19.11■□□□□ 0.65
SRRM4-204ENST00000641899 CETPP11597 493 aa19.11■□□□□ 0.65
SRRM4-204ENST00000641899 CASP7P55210 303 aa19.11■□□□□ 0.65
SRRM4-204ENST00000641899 TSR2Q969E8 191 aaKnown RBP19.11■□□□□ 0.65
SRRM4-204ENST00000641899 PCDHAC2Q9Y5I4 1007 aa19.11■□□□□ 0.65
SRRM4-204ENST00000641899 PLIN1O60240 522 aa19.1■□□□□ 0.65
SRRM4-204ENST00000641899 VGLL4Q14135 290 aa19.1■□□□□ 0.65
SRRM4-204ENST00000641899 G2E3Q7L622 706 aa19.1■□□□□ 0.65
SRRM4-204ENST00000641899 BRI3BPQ8WY22 251 aa19.1■□□□□ 0.65
SRRM4-204ENST00000641899 OTUD5Q96G74 571 aa19.1■□□□□ 0.65
SRRM4-204ENST00000641899 TMOD2Q9NZR1 351 aa19.1■□□□□ 0.65
SRRM4-204ENST00000641899 MYH3P11055 1940 aa19.1■□□□□ 0.65
SRRM4-204ENST00000641899 IRS2Q9Y4H2 1338 aa19.09■□□□□ 0.65
SRRM4-204ENST00000641899 SNAP23O00161 211 aa19.09■□□□□ 0.65
SRRM4-204ENST00000641899 HOXD10P28358 340 aa19.09■□□□□ 0.65
SRRM4-204ENST00000641899 HIBADHP31937 336 aaKnown RBP19.09■□□□□ 0.65
SRRM4-204ENST00000641899 CCDC27Q2M243 656 aa19.09■□□□□ 0.65
SRRM4-204ENST00000641899 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.09■□□□□ 0.65
SRRM4-204ENST00000641899 VPS37DQ86XT2 251 aa19.09■□□□□ 0.65
SRRM4-204ENST00000641899 DZIP1LQ8IYY4 767 aaKnown RBP19.09■□□□□ 0.65
SRRM4-204ENST00000641899 NKX2-3Q8TAU0 364 aa19.09■□□□□ 0.65
SRRM4-204ENST00000641899 TDRD3Q9H7E2 651 aaKnown RBP19.09■□□□□ 0.65
SRRM4-204ENST00000641899 PRKRIP1Q9H875 184 aaPredicted RBP19.09■□□□□ 0.65
SRRM4-204ENST00000641899 JAG2Q9Y219 1238 aa19.09■□□□□ 0.65
SRRM4-204ENST00000641899 TCP10L2B9ZVM9 353 aa19.08■□□□□ 0.64
SRRM4-204ENST00000641899 TLR2O60603 784 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms