RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 HDGFL1Q5TGJ6 251 aa9.49□□□□□ -0.89
PHGDH-225ENST00000641720 STRIP1Q5VSL9 837 aa9.49□□□□□ -0.89
PHGDH-225ENST00000641720 DUSP27Q5VZP5 1158 aa9.49□□□□□ -0.89
PHGDH-225ENST00000641720 TRMT2AQ8IZ69 625 aaKnown RBP9.49□□□□□ -0.89
PHGDH-225ENST00000641720 CERS5Q8N5B7 392 aa9.49□□□□□ -0.89
PHGDH-225ENST00000641720 CD99L2Q8TCZ2 262 aa9.49□□□□□ -0.89
PHGDH-225ENST00000641720 SHISA4Q96DD7 197 aa9.49□□□□□ -0.89
PHGDH-225ENST00000641720 MS4A4AQ96JQ5 239 aa9.49□□□□□ -0.89
PHGDH-225ENST00000641720 YTHDC1Q96MU7 727 aaKnown RBP9.49□□□□□ -0.89
PHGDH-225ENST00000641720 MYH16Q9H6N6 1097 aa9.49□□□□□ -0.89
PHGDH-225ENST00000641720 PHAXQ9H814 394 aaKnown RBP9.49□□□□□ -0.89
PHGDH-225ENST00000641720 MINPP1Q9UNW1 487 aa9.49□□□□□ -0.89
PHGDH-225ENST00000641720 PLXNB2O15031 1838 aa9.48□□□□□ -0.89
PHGDH-225ENST00000641720 MANSC4A6NHS7 340 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-225ENST00000641720 PDE8AO60658 829 aa9.48□□□□□ -0.89
PHGDH-225ENST00000641720 ALDH1A1P00352 501 aa9.48□□□□□ -0.89
PHGDH-225ENST00000641720 ATP2B4P23634 1241 aa9.48□□□□□ -0.89
PHGDH-225ENST00000641720 UBE2Q1Q7Z7E8 422 aa9.48□□□□□ -0.89
PHGDH-225ENST00000641720 MTMR14Q8NCE2 650 aa9.48□□□□□ -0.89
PHGDH-225ENST00000641720 JARID2Q92833 1246 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-225ENST00000641720 ANKIB1Q9P2G1 1089 aa9.48□□□□□ -0.89
PHGDH-225ENST00000641720 DBF4Q9UBU7 674 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-225ENST00000641720 MYO3BQ8WXR4 1341 aa9.48□□□□□ -0.89
PHGDH-225ENST00000641720 FRMPD3Q5JV73 1810 aa9.47□□□□□ -0.89
PHGDH-225ENST00000641720 IGKV5-2P06315 115 aa9.47□□□□□ -0.89
PHGDH-225ENST00000641720 CCT4P50991 539 aaKnown RBP9.47□□□□□ -0.89
PHGDH-225ENST00000641720 PRKG1Q13976 671 aa9.47□□□□□ -0.89
PHGDH-225ENST00000641720 TWISTNBQ3B726 338 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-225ENST00000641720 ARMC9Q7Z3E5 817 aa9.47□□□□□ -0.89
PHGDH-225ENST00000641720 APOBEC3FQ8IUX4 373 aaKnown RBP9.47□□□□□ -0.89
PHGDH-225ENST00000641720 CCDC191Q8NCU4 936 aa9.47□□□□□ -0.89
PHGDH-225ENST00000641720 TTLL11Q8NHH1 800 aa9.47□□□□□ -0.89
PHGDH-225ENST00000641720 ANGEL1Q9UNK9 670 aaKnown RBP9.47□□□□□ -0.89
PHGDH-225ENST00000641720 ZNF804BA4D1E1 1349 aa9.47□□□□□ -0.89
PHGDH-225ENST00000641720 DOCK2Q92608 1830 aa9.47□□□□□ -0.89
PHGDH-225ENST00000641720 UNCXA6NJT0 531 aa9.46□□□□□ -0.9
PHGDH-225ENST00000641720 H0YGN5 161 aa9.46□□□□□ -0.9
PHGDH-225ENST00000641720 USP2O75604 605 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-225ENST00000641720 MMP14P50281 582 aa9.46□□□□□ -0.9
PHGDH-225ENST00000641720 CASP7P55210 303 aa9.46□□□□□ -0.9
PHGDH-225ENST00000641720 CTSWP56202 376 aa9.46□□□□□ -0.9
PHGDH-225ENST00000641720 INHBEP58166 350 aa9.46□□□□□ -0.9
PHGDH-225ENST00000641720 CCDC152Q4G0S7 254 aa9.46□□□□□ -0.9
PHGDH-225ENST00000641720 CDAN1Q8IWY9 1227 aa9.46□□□□□ -0.9
PHGDH-225ENST00000641720 ERO1AQ96HE7 468 aa9.46□□□□□ -0.9
PHGDH-225ENST00000641720 CCDC85AQ96PX6 553 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-225ENST00000641720 DEFB129Q9H1M3 183 aa9.46□□□□□ -0.9
PHGDH-225ENST00000641720 GREM2Q9H772 168 aa9.46□□□□□ -0.9
PHGDH-225ENST00000641720 BSDC1Q9NW68 430 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-225ENST00000641720 HYPKQ9NX55 129 aa9.46□□□□□ -0.9
PHGDH-225ENST00000641720 PTCH2Q9Y6C5 1203 aa9.46□□□□□ -0.9
PHGDH-225ENST00000641720 CTGFP29279 349 aa9.45□□□□□ -0.9
PHGDH-225ENST00000641720 TTLL12Q14166 644 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-225ENST00000641720 KIAA0825Q8IV33 1275 aa9.45□□□□□ -0.9
PHGDH-225ENST00000641720 ANKRD18AQ8IVF6 992 aa9.45□□□□□ -0.9
PHGDH-225ENST00000641720 BRI3BPQ8WY22 251 aa9.45□□□□□ -0.9
PHGDH-225ENST00000641720 TEPSINQ96N21 525 aa9.45□□□□□ -0.9
PHGDH-225ENST00000641720 MYD88Q99836 296 aa9.45□□□□□ -0.9
PHGDH-225ENST00000641720 COA1Q9GZY4 146 aa9.45□□□□□ -0.9
PHGDH-225ENST00000641720 EFCC1Q9HA90 598 aa9.45□□□□□ -0.9
PHGDH-225ENST00000641720 VAMP4O75379 141 aa9.44□□□□□ -0.9
PHGDH-225ENST00000641720 NF2P35240 595 aa9.44□□□□□ -0.9
PHGDH-225ENST00000641720 SP3Q02447 781 aa9.44□□□□□ -0.9
PHGDH-225ENST00000641720 NBPF12Q5TAG4 269 aaPredicted RBP9.44□□□□□ -0.9
PHGDH-225ENST00000641720 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.44□□□□□ -0.9
PHGDH-225ENST00000641720 CNKSR2Q8WXI2 1034 aa9.44□□□□□ -0.9
PHGDH-225ENST00000641720 METTL22Q9BUU2 404 aaPredicted RBP9.44□□□□□ -0.9
PHGDH-225ENST00000641720 RBM27Q9P2N5 1060 aaKnown RBP9.44□□□□□ -0.9
PHGDH-225ENST00000641720 ADGRA2Q96PE1 1338 aa9.44□□□□□ -0.9
PHGDH-225ENST00000641720 ATAD5Q96QE3 1844 aa9.44□□□□□ -0.9
PHGDH-225ENST00000641720 TTC28Q96AY4 2481 aa9.44□□□□□ -0.9
PHGDH-225ENST00000641720 DDX60LQ5H9U9 1706 aaKnown RBP9.43□□□□□ -0.9
PHGDH-225ENST00000641720 SPDYE2BA6NHP3 402 aa9.43□□□□□ -0.9
PHGDH-225ENST00000641720 SNAP23O00161 211 aa9.43□□□□□ -0.9
PHGDH-225ENST00000641720 SPDYE6P0CI01 402 aa9.43□□□□□ -0.9
PHGDH-225ENST00000641720 C15orf52Q6ZUT6 534 aaKnown RBP9.43□□□□□ -0.9
PHGDH-225ENST00000641720 SLC10A4Q96EP9 437 aa9.43□□□□□ -0.9
PHGDH-225ENST00000641720 PRMT6Q96LA8 375 aaPredicted RBP9.43□□□□□ -0.9
PHGDH-225ENST00000641720 ARHGAP39Q9C0H5 1083 aa9.43□□□□□ -0.9
PHGDH-225ENST00000641720 CWC25Q9NXE8 425 aaPredicted RBP9.43□□□□□ -0.9
PHGDH-225ENST00000641720 PPP2R3BQ9Y5P8 575 aa9.43□□□□□ -0.9
PHGDH-225ENST00000641720 DOCK1Q14185 1865 aa9.42□□□□□ -0.9
PHGDH-225ENST00000641720 SOX1O00570 391 aaPredicted RBP9.42□□□□□ -0.9
PHGDH-225ENST00000641720 GTF2IP78347 998 aa9.42□□□□□ -0.9
PHGDH-225ENST00000641720 CCDC30Q5VVM6 783 aa9.42□□□□□ -0.9
PHGDH-225ENST00000641720 TTLL5Q6EMB2 1281 aa9.42□□□□□ -0.9
PHGDH-225ENST00000641720 CHRDL2Q6WN34 429 aa9.42□□□□□ -0.9
PHGDH-225ENST00000641720 FAM43AQ8N2R8 423 aa9.42□□□□□ -0.9
PHGDH-225ENST00000641720 OGFOD1Q8N543 542 aa9.42□□□□□ -0.9
PHGDH-225ENST00000641720 PLA2G12BQ9BX93 195 aa9.42□□□□□ -0.9
PHGDH-225ENST00000641720 CD209Q9NNX6 404 aa9.42□□□□□ -0.9
PHGDH-225ENST00000641720 LEMD3Q9Y2U8 911 aa9.42□□□□□ -0.9
PHGDH-225ENST00000641720 LOC285556D6RIA3 1793 aa9.42□□□□□ -0.9
PHGDH-225ENST00000641720 G3V3G9 751 aa9.41□□□□□ -0.9
PHGDH-225ENST00000641720 H7C1W4 665 aa9.41□□□□□ -0.9
PHGDH-225ENST00000641720 CSF1RP07333 972 aa9.41□□□□□ -0.9
PHGDH-225ENST00000641720 IL1R1P14778 569 aa9.41□□□□□ -0.9
PHGDH-225ENST00000641720 FKBP1AP62942 108 aaKnown RBP9.41□□□□□ -0.9
PHGDH-225ENST00000641720 DCAF8Q5TAQ9 597 aa9.41□□□□□ -0.9
PHGDH-225ENST00000641720 G2E3Q7L622 706 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms