RNA–Protein interactions for RNA: ENST00000640736.1

RTTN-221, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,132 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-221ENST00000640736 USP44Q9H0E7 712 aa17.35■□□□□ 0.37
RTTN-221ENST00000640736 HDAC9Q9UKV0 1011 aa17.35■□□□□ 0.37
RTTN-221ENST00000640736 JAG2Q9Y219 1238 aa17.35■□□□□ 0.37
RTTN-221ENST00000640736 PITPNM2Q9BZ72 1349 aa17.35■□□□□ 0.37
RTTN-221ENST00000640736 WNT10BO00744 389 aa17.34■□□□□ 0.37
RTTN-221ENST00000640736 CT47B1P0C2W7 299 aaPredicted RBP17.34■□□□□ 0.37
RTTN-221ENST00000640736 HSPA8P11142 646 aaKnown RBP17.34■□□□□ 0.37
RTTN-221ENST00000640736 IL1R1P14778 569 aa17.34■□□□□ 0.37
RTTN-221ENST00000640736 PRDM10Q9NQV6 1147 aa17.34■□□□□ 0.37
RTTN-221ENST00000640736 UBE4AQ14139 1066 aa17.33■□□□□ 0.36
RTTN-221ENST00000640736 RGMBQ6NW40 437 aa17.33■□□□□ 0.36
RTTN-221ENST00000640736 CERS5Q8N5B7 392 aa17.33■□□□□ 0.36
RTTN-221ENST00000640736 NOB1Q9ULX3 412 aaKnown RBP17.33■□□□□ 0.36
RTTN-221ENST00000640736 RIPOR2Q9Y4F9 1068 aa17.33■□□□□ 0.36
RTTN-221ENST00000640736 MROH5Q6ZUA9 1318 aa17.32■□□□□ 0.36
RTTN-221ENST00000640736 F8W031 263 aaPredicted RBP17.32■□□□□ 0.36
RTTN-221ENST00000640736 GYG1P46976 350 aa17.32■□□□□ 0.36
RTTN-221ENST00000640736 MMP14P50281 582 aa17.32■□□□□ 0.36
RTTN-221ENST00000640736 LRRC24Q50LG9 513 aa17.32■□□□□ 0.36
RTTN-221ENST00000640736 PRAMEF18Q5VWM3 479 aa17.32■□□□□ 0.36
RTTN-221ENST00000640736 KLHDC4Q8TBB5 520 aa17.32■□□□□ 0.36
RTTN-221ENST00000640736 TSKSQ9UJT2 592 aa17.32■□□□□ 0.36
RTTN-221ENST00000640736 ECM29Q5VYK3 1845 aa17.32■□□□□ 0.36
RTTN-221ENST00000640736 PAPPA2Q9BXP8 1791 aa17.31■□□□□ 0.36
RTTN-221ENST00000640736 ZNF157P51786 506 aaPredicted RBP17.31■□□□□ 0.36
RTTN-221ENST00000640736 NOGQ13253 232 aa17.31■□□□□ 0.36
RTTN-221ENST00000640736 METTL24Q5JXM2 366 aa17.31■□□□□ 0.36
RTTN-221ENST00000640736 ZIC5Q96T25 663 aa17.31■□□□□ 0.36
RTTN-221ENST00000640736 HIBADHP31937 336 aaKnown RBP17.3■□□□□ 0.36
RTTN-221ENST00000640736 MIER1Q8N108 512 aa17.3■□□□□ 0.36
RTTN-221ENST00000640736 API5Q9BZZ5 524 aaKnown RBP17.3■□□□□ 0.36
RTTN-221ENST00000640736 FAM155AB1AL88 458 aaPredicted RBP17.29■□□□□ 0.36
RTTN-221ENST00000640736 RARSP54136 660 aaKnown RBP17.29■□□□□ 0.36
RTTN-221ENST00000640736 BRPF1P55201 1214 aaPredicted RBP17.29■□□□□ 0.36
RTTN-221ENST00000640736 FKBP1AP62942 108 aaKnown RBP17.29■□□□□ 0.36
RTTN-221ENST00000640736 DLGAP5Q15398 846 aa17.29■□□□□ 0.36
RTTN-221ENST00000640736 DIEXFQ68CQ4 756 aaKnown RBP17.29■□□□□ 0.36
RTTN-221ENST00000640736 MOB2Q70IA6 237 aa17.29■□□□□ 0.36
RTTN-221ENST00000640736 TDRD7Q8NHU6 1098 aaKnown RBP17.29■□□□□ 0.36
RTTN-221ENST00000640736 CCDC102AQ96A19 550 aa17.29■□□□□ 0.36
RTTN-221ENST00000640736 ZBED3Q96IU2 234 aaPredicted RBP17.29■□□□□ 0.36
RTTN-221ENST00000640736 FAM84BQ96KN1 310 aaPredicted RBP17.29■□□□□ 0.36
RTTN-221ENST00000640736 PCDHAC2Q9Y5I4 1007 aa17.29■□□□□ 0.36
RTTN-221ENST00000640736 ARAP2Q8WZ64 1704 aa17.29■□□□□ 0.36
RTTN-221ENST00000640736 UBTFL1P0CB47 393 aaPredicted RBP17.28■□□□□ 0.36
RTTN-221ENST00000640736 TTLL12Q14166 644 aaPredicted RBP17.28■□□□□ 0.36
RTTN-221ENST00000640736 VPS37DQ86XT2 251 aa17.28■□□□□ 0.36
RTTN-221ENST00000640736 APOBEC3FQ8IUX4 373 aaKnown RBP17.28■□□□□ 0.36
RTTN-221ENST00000640736 AKAP11Q9UKA4 1901 aa17.27■□□□□ 0.36
RTTN-221ENST00000640736 FKBP1BP68106 108 aa17.27■□□□□ 0.36
RTTN-221ENST00000640736 CFAP100Q494V2 611 aa17.27■□□□□ 0.36
RTTN-221ENST00000640736 MFSD14BQ5SR56 506 aa17.27■□□□□ 0.36
RTTN-221ENST00000640736 IQSEC3Q9UPP2 1182 aaPredicted RBP17.27■□□□□ 0.36
RTTN-221ENST00000640736 FAM205AQ6ZU69 1335 aa17.26■□□□□ 0.35
RTTN-221ENST00000640736 CASP8AP2Q9UKL3 1982 aa17.26■□□□□ 0.35
RTTN-221ENST00000640736 MYH13Q9UKX3 1938 aa17.26■□□□□ 0.35
RTTN-221ENST00000640736 UBE2Q2LH0YL09 131 aa17.26■□□□□ 0.35
RTTN-221ENST00000640736 PDE8BO95263 885 aa17.26■□□□□ 0.35
RTTN-221ENST00000640736 SLC10A3P09131 477 aa17.26■□□□□ 0.35
RTTN-221ENST00000640736 NF2P35240 595 aa17.26■□□□□ 0.35
RTTN-221ENST00000640736 RFX5P48382 616 aaPredicted RBP17.26■□□□□ 0.35
RTTN-221ENST00000640736 RBM5P52756 815 aaKnown RBP eCLIP17.26■□□□□ 0.35
RTTN-221ENST00000640736 KIF23Q02241 960 aaPredicted RBP17.26■□□□□ 0.35
RTTN-221ENST00000640736 VGLL2Q8N8G2 317 aa17.26■□□□□ 0.35
RTTN-221ENST00000640736 KIF16BQ96L93 1317 aa17.25■□□□□ 0.35
RTTN-221ENST00000640736 CLRN2A0PK11 232 aa17.25■□□□□ 0.35
RTTN-221ENST00000640736 CA12O43570 354 aa17.25■□□□□ 0.35
RTTN-221ENST00000640736 MYO1BO43795 1136 aa17.25■□□□□ 0.35
RTTN-221ENST00000640736 CHAF1AQ13111 956 aaPredicted RBP17.25■□□□□ 0.35
RTTN-221ENST00000640736 CAVIN4Q5BKX8 364 aa17.25■□□□□ 0.35
RTTN-221ENST00000640736 FBXO33Q7Z6M2 555 aa17.25■□□□□ 0.35
RTTN-221ENST00000640736 RASAL3Q86YV0 1011 aa17.25■□□□□ 0.35
RTTN-221ENST00000640736 MTMR14Q8NCE2 650 aa17.25■□□□□ 0.35
RTTN-221ENST00000640736 LRRFIP2Q9Y608 721 aaKnown RBP17.25■□□□□ 0.35
RTTN-221ENST00000640736 AOX1Q06278 1338 aa17.24■□□□□ 0.35
RTTN-221ENST00000640736 SPDYE2BA6NHP3 402 aa17.24■□□□□ 0.35
RTTN-221ENST00000640736 EYA2O00167 538 aa17.24■□□□□ 0.35
RTTN-221ENST00000640736 FRAT2O75474 233 aaPredicted RBP17.24■□□□□ 0.35
RTTN-221ENST00000640736 SPDYE6P0CI01 402 aa17.24■□□□□ 0.35
RTTN-221ENST00000640736 HNRNPUQ00839 825 aaKnown RBP eCLIP17.24■□□□□ 0.35
RTTN-221ENST00000640736 PTPN12Q05209 780 aaKnown RBP17.24■□□□□ 0.35
RTTN-221ENST00000640736 PRKG1Q13976 671 aa17.24■□□□□ 0.35
RTTN-221ENST00000640736 PRMT6Q96LA8 375 aaPredicted RBP17.24■□□□□ 0.35
RTTN-221ENST00000640736 MEIS3Q99687 375 aa17.24■□□□□ 0.35
RTTN-221ENST00000640736 SIL1Q9H173 461 aa17.24■□□□□ 0.35
RTTN-221ENST00000640736 VEZTQ9HBM0 779 aa17.24■□□□□ 0.35
RTTN-221ENST00000640736 TTF2Q9UNY4 1162 aaKnown RBP17.24■□□□□ 0.35
RTTN-221ENST00000640736 PUM3Q15397 648 aaKnown RBP17.23■□□□□ 0.35
RTTN-221ENST00000640736 ARHGAP45Q92619 1136 aa17.23■□□□□ 0.35
RTTN-221ENST00000640736 DEFB129Q9H1M3 183 aa17.23■□□□□ 0.35
RTTN-221ENST00000640736 COL1A1P02452 1464 aaPredicted RBP17.23■□□□□ 0.35
RTTN-221ENST00000640736 BCAR3O75815 825 aa17.22■□□□□ 0.35
RTTN-221ENST00000640736 IFIT1P09914 478 aaKnown RBP17.22■□□□□ 0.35
RTTN-221ENST00000640736 BCAMP50895 628 aa17.22■□□□□ 0.35
RTTN-221ENST00000640736 FRAT1Q92837 279 aaPredicted RBP17.22■□□□□ 0.35
RTTN-221ENST00000640736 HDAC5Q9UQL6 1122 aa17.22■□□□□ 0.35
RTTN-221ENST00000640736 SLC5A1P13866 664 aa17.21■□□□□ 0.35
RTTN-221ENST00000640736 FGFR2P21802 821 aa17.21■□□□□ 0.35
RTTN-221ENST00000640736 GRIK5Q16478 980 aa17.21■□□□□ 0.35
RTTN-221ENST00000640736 ATG9AQ7Z3C6 839 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms