RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 FBXO33Q7Z6M2 555 aa13.49□□□□□ -0.25
SCARB2-222ENST00000640634 COA1Q9GZY4 146 aa13.49□□□□□ -0.25
SCARB2-222ENST00000640634 NMRK2Q9NPI5 230 aa13.49□□□□□ -0.25
SCARB2-222ENST00000640634 DBNLQ9UJU6 430 aaKnown RBP13.49□□□□□ -0.25
SCARB2-222ENST00000640634 PSME4Q14997 1843 aa13.49□□□□□ -0.25
SCARB2-222ENST00000640634 EIF6P56537 245 aaKnown RBP13.48□□□□□ -0.25
SCARB2-222ENST00000640634 GTF2IP78347 998 aa13.48□□□□□ -0.25
SCARB2-222ENST00000640634 PI16Q6UXB8 463 aa13.48□□□□□ -0.25
SCARB2-222ENST00000640634 GLTPD2A6NH11 291 aa13.47□□□□□ -0.25
SCARB2-222ENST00000640634 IL1R1P14778 569 aa13.47□□□□□ -0.25
SCARB2-222ENST00000640634 HDAC1Q13547 482 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-222ENST00000640634 SCARF1Q14162 830 aa13.47□□□□□ -0.25
SCARB2-222ENST00000640634 CCDC102BQ68D86 513 aa13.47□□□□□ -0.25
SCARB2-222ENST00000640634 CIAPIN1Q6FI81 312 aa13.47□□□□□ -0.25
SCARB2-222ENST00000640634 AACSQ86V21 672 aa13.47□□□□□ -0.25
SCARB2-222ENST00000640634 CERS5Q8N5B7 392 aa13.47□□□□□ -0.25
SCARB2-222ENST00000640634 ZNF784Q8NCA9 323 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-222ENST00000640634 ZC3H4Q9UPT8 1303 aaKnown RBP13.47□□□□□ -0.25
SCARB2-222ENST00000640634 POTECB2RU33 542 aa13.47□□□□□ -0.25
SCARB2-222ENST00000640634 GMPSP49915 693 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-222ENST00000640634 SCNN1DP51172 638 aa13.47□□□□□ -0.25
SCARB2-222ENST00000640634 CHAF1AQ13111 956 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-222ENST00000640634 GRIK5Q16478 980 aa13.47□□□□□ -0.25
SCARB2-222ENST00000640634 DACT2Q5SW24 774 aa13.47□□□□□ -0.25
SCARB2-222ENST00000640634 PODNQ7Z5L7 613 aa13.47□□□□□ -0.25
SCARB2-222ENST00000640634 VPS37DQ86XT2 251 aa13.47□□□□□ -0.25
SCARB2-222ENST00000640634 TDRD7Q8NHU6 1098 aaKnown RBP13.47□□□□□ -0.25
SCARB2-222ENST00000640634 OTUD7AQ8TE49 926 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-222ENST00000640634 KIF1BPQ96EK5 621 aa13.47□□□□□ -0.25
SCARB2-222ENST00000640634 AKAP2Q9Y2D5 859 aa13.47□□□□□ -0.25
SCARB2-222ENST00000640634 CAVIN4Q5BKX8 364 aa13.46□□□□□ -0.25
SCARB2-222ENST00000640634 B4GALNT3Q6L9W6 998 aa13.46□□□□□ -0.25
SCARB2-222ENST00000640634 ERC1Q8IUD2 1116 aa13.46□□□□□ -0.25
SCARB2-222ENST00000640634 C16orf71Q8IYS4 520 aaPredicted RBP13.46□□□□□ -0.25
SCARB2-222ENST00000640634 GPC2Q8N158 579 aa13.46□□□□□ -0.25
SCARB2-222ENST00000640634 LRRCC1Q9C099 1032 aa13.46□□□□□ -0.25
SCARB2-222ENST00000640634 NDUFB9Q9Y6M9 179 aa13.46□□□□□ -0.25
SCARB2-222ENST00000640634 ADAMTSL1Q8N6G6 1762 aa13.46□□□□□ -0.25
SCARB2-222ENST00000640634 WDR90Q96KV7 1748 aa13.46□□□□□ -0.26
SCARB2-222ENST00000640634 MYH13Q9UKX3 1938 aa13.45□□□□□ -0.26
SCARB2-222ENST00000640634 USP17L3A6NCW0 530 aa13.45□□□□□ -0.26
SCARB2-222ENST00000640634 USP17L4A6NCW7 530 aa13.45□□□□□ -0.26
SCARB2-222ENST00000640634 RAB11FIP3O75154 756 aa13.45□□□□□ -0.26
SCARB2-222ENST00000640634 AAMPQ13685 434 aa13.45□□□□□ -0.26
SCARB2-222ENST00000640634 RASGRF1Q13972 1273 aa13.45□□□□□ -0.26
SCARB2-222ENST00000640634 HSP90AB4PQ58FF6 505 aa13.45□□□□□ -0.26
SCARB2-222ENST00000640634 TSHZ3Q63HK5 1081 aa13.45□□□□□ -0.26
SCARB2-222ENST00000640634 USP17L1Q7RTZ2 530 aa13.45□□□□□ -0.26
SCARB2-222ENST00000640634 RGS22Q8NE09 1264 aa13.45□□□□□ -0.26
SCARB2-222ENST00000640634 RRAGCQ9HB90 399 aa13.45□□□□□ -0.26
SCARB2-222ENST00000640634 GPR108Q9NPR9 543 aa13.45□□□□□ -0.26
SCARB2-222ENST00000640634 EGFRP00533 1210 aa13.44□□□□□ -0.26
SCARB2-222ENST00000640634 EPS15P42566 896 aa13.44□□□□□ -0.26
SCARB2-222ENST00000640634 TTLL5Q6EMB2 1281 aa13.44□□□□□ -0.26
SCARB2-222ENST00000640634 GTPBP6O43824 516 aaPredicted RBP13.44□□□□□ -0.26
SCARB2-222ENST00000640634 VIL1P09327 827 aaKnown RBP13.44□□□□□ -0.26
SCARB2-222ENST00000640634 POTEIP0CG38 1075 aa13.44□□□□□ -0.26
SCARB2-222ENST00000640634 POTEJP0CG39 1038 aa13.44□□□□□ -0.26
SCARB2-222ENST00000640634 GORABQ5T7V8 394 aa13.44□□□□□ -0.26
SCARB2-222ENST00000640634 DPY19L2Q6NUT2 758 aa13.44□□□□□ -0.26
SCARB2-222ENST00000640634 RSBN1LQ6PCB5 846 aaPredicted RBP13.44□□□□□ -0.26
SCARB2-222ENST00000640634 SNRKQ9NRH2 765 aa13.44□□□□□ -0.26
SCARB2-222ENST00000640634 F8W031 263 aaPredicted RBP13.43□□□□□ -0.26
SCARB2-222ENST00000640634 FRAT2O75474 233 aaPredicted RBP13.43□□□□□ -0.26
SCARB2-222ENST00000640634 MCAMP43121 646 aa13.43□□□□□ -0.26
SCARB2-222ENST00000640634 TNIP1Q15025 636 aa13.43□□□□□ -0.26
SCARB2-222ENST00000640634 ANKRD45Q5TZF3 282 aa13.43□□□□□ -0.26
SCARB2-222ENST00000640634 STRIP1Q5VSL9 837 aa13.43□□□□□ -0.26
SCARB2-222ENST00000640634 KIAA0825Q8IV33 1275 aa13.43□□□□□ -0.26
SCARB2-222ENST00000640634 SMC5Q8IY18 1101 aa13.43□□□□□ -0.26
SCARB2-222ENST00000640634 CLASRPQ8N2M8 674 aaKnown RBP13.43□□□□□ -0.26
SCARB2-222ENST00000640634 L3MBTL3Q96JM7 780 aaPredicted RBP13.43□□□□□ -0.26
SCARB2-222ENST00000640634 GMLQ99445 158 aa13.43□□□□□ -0.26
SCARB2-222ENST00000640634 RWDD1Q9H446 243 aaPredicted RBP13.43□□□□□ -0.26
SCARB2-222ENST00000640634 GPBP1L1Q9HC44 474 aaPredicted RBP13.43□□□□□ -0.26
SCARB2-222ENST00000640634 PCDHAC2Q9Y5I4 1007 aa13.43□□□□□ -0.26
SCARB2-222ENST00000640634 KDM2BQ8NHM5 1336 aa13.43□□□□□ -0.26
SCARB2-222ENST00000640634 NEFLP07196 543 aa13.42□□□□□ -0.26
SCARB2-222ENST00000640634 SAMD1Q6SPF0 538 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-222ENST00000640634 SKAP1Q86WV1 359 aa13.42□□□□□ -0.26
SCARB2-222ENST00000640634 GPRC5DQ9NZD1 345 aa13.42□□□□□ -0.26
SCARB2-222ENST00000640634 HMG20BQ9P0W2 317 aa13.42□□□□□ -0.26
SCARB2-222ENST00000640634 FAM205AQ6ZU69 1335 aa13.42□□□□□ -0.26
SCARB2-222ENST00000640634 AKAP11Q9UKA4 1901 aa13.42□□□□□ -0.26
SCARB2-222ENST00000640634 ARID4AP29374 1257 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-222ENST00000640634 MFSD14BQ5SR56 506 aa13.42□□□□□ -0.26
SCARB2-222ENST00000640634 TTC39AQ5SRH9 613 aa13.42□□□□□ -0.26
SCARB2-222ENST00000640634 TBC1D9Q6ZT07 1266 aa13.42□□□□□ -0.26
SCARB2-222ENST00000640634 MICALL2Q8IY33 904 aa13.42□□□□□ -0.26
SCARB2-222ENST00000640634 TRPM4Q8TD43 1214 aa13.42□□□□□ -0.26
SCARB2-222ENST00000640634 LNPKQ9C0E8 428 aa13.42□□□□□ -0.26
SCARB2-222ENST00000640634 AOX1Q06278 1338 aa13.41□□□□□ -0.26
SCARB2-222ENST00000640634 IFIT2P09913 472 aaKnown RBP13.41□□□□□ -0.26
SCARB2-222ENST00000640634 SAMD7Q7Z3H4 446 aa13.41□□□□□ -0.26
SCARB2-222ENST00000640634 GCC1Q96CN9 775 aa13.41□□□□□ -0.26
SCARB2-222ENST00000640634 CNOT7Q9UIV1 285 aaKnown RBP13.41□□□□□ -0.26
SCARB2-222ENST00000640634 ASTN2O75129 1339 aaPredicted RBP13.41□□□□□ -0.26
SCARB2-222ENST00000640634 KIF3CO14782 793 aa13.4□□□□□ -0.26
SCARB2-222ENST00000640634 PRDX5P30044 214 aa13.4□□□□□ -0.26
SCARB2-222ENST00000640634 TBC1D10BQ4KMP7 808 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms