RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 MAP3K5Q99683 1374 aa16.7■□□□□ 0.26
HNRNPU-226ENST00000640218 CTAGE15A4D2H0 777 aa16.69■□□□□ 0.26
HNRNPU-226ENST00000640218 CTAGE8P0CG41 777 aa16.69■□□□□ 0.26
HNRNPU-226ENST00000640218 CTAGE6Q86UF2 777 aa16.69■□□□□ 0.26
HNRNPU-226ENST00000640218 CTAGE4Q8IX94 777 aa16.69■□□□□ 0.26
HNRNPU-226ENST00000640218 FLT4P35916 1363 aa16.69■□□□□ 0.26
HNRNPU-226ENST00000640218 FAM13AO94988 1023 aa16.69■□□□□ 0.26
HNRNPU-226ENST00000640218 URB2Q14146 1524 aaKnown RBP16.69■□□□□ 0.26
HNRNPU-226ENST00000640218 DPH6Q7L8W6 267 aa16.69■□□□□ 0.26
HNRNPU-226ENST00000640218 ZNF608Q9ULD9 1512 aaPredicted RBP16.69■□□□□ 0.26
HNRNPU-226ENST00000640218 STX17P56962 302 aa16.69■□□□□ 0.26
HNRNPU-226ENST00000640218 PRKG1Q13976 671 aa16.69■□□□□ 0.26
HNRNPU-226ENST00000640218 VAMP4O75379 141 aa16.69■□□□□ 0.26
HNRNPU-226ENST00000640218 PAIP2Q9BPZ3 127 aaKnown RBP16.69■□□□□ 0.26
HNRNPU-226ENST00000640218 WDR7Q9Y4E6 1490 aa16.69■□□□□ 0.26
HNRNPU-226ENST00000640218 FERP16591 822 aa16.69■□□□□ 0.26
HNRNPU-226ENST00000640218 PRIMPOLQ96LW4 560 aa16.69■□□□□ 0.26
HNRNPU-226ENST00000640218 IMPG2Q9BZV3 1241 aa16.69■□□□□ 0.26
HNRNPU-226ENST00000640218 ZBTB21Q9ULJ3 1066 aa16.69■□□□□ 0.26
HNRNPU-226ENST00000640218 MYCP01106 439 aaPredicted RBP16.68■□□□□ 0.26
HNRNPU-226ENST00000640218 PLIN2Q99541 437 aa16.68■□□□□ 0.26
HNRNPU-226ENST00000640218 TTC12Q9H892 705 aaPredicted RBP16.68■□□□□ 0.26
HNRNPU-226ENST00000640218 LDHBP07195 334 aaKnown RBP16.68■□□□□ 0.26
HNRNPU-226ENST00000640218 PLCG2P16885 1265 aa16.68■□□□□ 0.26
HNRNPU-226ENST00000640218 TACC1O75410 805 aa16.68■□□□□ 0.26
HNRNPU-226ENST00000640218 NOLC1Q14978 699 aaKnown RBP eCLIP16.68■□□□□ 0.26
HNRNPU-226ENST00000640218 SNX21Q969T3 373 aa16.68■□□□□ 0.26
HNRNPU-226ENST00000640218 ZKSCAN3Q9BRR0 538 aa16.68■□□□□ 0.26
HNRNPU-226ENST00000640218 ZMYND15Q9H091 742 aa16.68■□□□□ 0.26
HNRNPU-226ENST00000640218 PTPDC1A2A3K4 754 aa16.68■□□□□ 0.26
HNRNPU-226ENST00000640218 RUFY3Q7L099 469 aa16.68■□□□□ 0.26
HNRNPU-226ENST00000640218 DCTPP1Q9H773 170 aa16.68■□□□□ 0.26
HNRNPU-226ENST00000640218 AKNAD1Q5T1N1 836 aa16.68■□□□□ 0.26
HNRNPU-226ENST00000640218 RAPGEF6Q8TEU7 1601 aa16.67■□□□□ 0.26
HNRNPU-226ENST00000640218 UBXN1Q04323 297 aa16.67■□□□□ 0.26
HNRNPU-226ENST00000640218 TYRO3Q06418 890 aa16.67■□□□□ 0.26
HNRNPU-226ENST00000640218 RASAL2Q9UJF2 1139 aa16.67■□□□□ 0.26
HNRNPU-226ENST00000640218 A2MP01023 1474 aa16.67■□□□□ 0.26
HNRNPU-226ENST00000640218 PLCH2O75038 1416 aa16.67■□□□□ 0.26
HNRNPU-226ENST00000640218 EEF2P13639 858 aaKnown RBP16.67■□□□□ 0.26
HNRNPU-226ENST00000640218 ABCC1P33527 1531 aa16.67■□□□□ 0.26
HNRNPU-226ENST00000640218 TERF1P54274 439 aa16.67■□□□□ 0.26
HNRNPU-226ENST00000640218 ATP2C2O75185 946 aa16.67■□□□□ 0.26
HNRNPU-226ENST00000640218 DHX32Q7L7V1 743 aaKnown RBP16.67■□□□□ 0.26
HNRNPU-226ENST00000640218 DDX12PQ92771 950 aa16.67■□□□□ 0.26
HNRNPU-226ENST00000640218 ZFP91Q96JP5 570 aaPredicted RBP16.67■□□□□ 0.26
HNRNPU-226ENST00000640218 EYA1Q99502 592 aa16.66■□□□□ 0.26
HNRNPU-226ENST00000640218 SSX2IPQ9Y2D8 614 aa16.66■□□□□ 0.26
HNRNPU-226ENST00000640218 CTAGE9A4FU28 777 aa16.66■□□□□ 0.26
HNRNPU-226ENST00000640218 DTHD1Q6ZMT9 781 aa16.66■□□□□ 0.26
HNRNPU-226ENST00000640218 GSTA5Q7RTV2 222 aa16.66■□□□□ 0.26
HNRNPU-226ENST00000640218 ITSN2Q9NZM3 1697 aa16.66■□□□□ 0.26
HNRNPU-226ENST00000640218 DYNC1I1O14576 645 aa16.66■□□□□ 0.26
HNRNPU-226ENST00000640218 RLBP1P12271 317 aa16.66■□□□□ 0.26
HNRNPU-226ENST00000640218 SERPINA10Q9UK55 444 aa16.66■□□□□ 0.26
HNRNPU-226ENST00000640218 PRPHP41219 470 aa16.66■□□□□ 0.26
HNRNPU-226ENST00000640218 DCAF5Q96JK2 942 aa16.66■□□□□ 0.26
HNRNPU-226ENST00000640218 GRIPAP1Q4V328 841 aa16.66■□□□□ 0.26
HNRNPU-226ENST00000640218 PPM1EQ8WY54 764 aa16.66■□□□□ 0.26
HNRNPU-226ENST00000640218 PHACTR3Q96KR7 559 aa16.66■□□□□ 0.26
HNRNPU-226ENST00000640218 ANKRD2Q9GZV1 360 aa16.66■□□□□ 0.26
HNRNPU-226ENST00000640218 BICDL2A1A5D9 508 aa16.65■□□□□ 0.26
HNRNPU-226ENST00000640218 RNMTO43148 476 aaKnown RBP16.65■□□□□ 0.26
HNRNPU-226ENST00000640218 APBA3O96018 575 aa16.65■□□□□ 0.26
HNRNPU-226ENST00000640218 KIF5AQ12840 1032 aa16.65■□□□□ 0.26
HNRNPU-226ENST00000640218 NEK11Q8NG66 645 aa16.65■□□□□ 0.26
HNRNPU-226ENST00000640218 ARFGAP3Q9NP61 516 aa16.65■□□□□ 0.26
HNRNPU-226ENST00000640218 SYCP2Q9BX26 1530 aa16.65■□□□□ 0.26
HNRNPU-226ENST00000640218 GNA11P29992 359 aa16.65■□□□□ 0.26
HNRNPU-226ENST00000640218 MCM6Q14566 821 aa16.65■□□□□ 0.26
HNRNPU-226ENST00000640218 C8orf34Q49A92 452 aa16.65■□□□□ 0.26
HNRNPU-226ENST00000640218 IQCGQ9H095 443 aaKnown RBP16.65■□□□□ 0.26
HNRNPU-226ENST00000640218 POLR3AO14802 1390 aaPredicted RBP16.65■□□□□ 0.26
HNRNPU-226ENST00000640218 PRAG1Q86YV5 1406 aa16.65■□□□□ 0.26
HNRNPU-226ENST00000640218 PRIM1P49642 420 aaKnown RBP16.65■□□□□ 0.26
HNRNPU-226ENST00000640218 KRT83P78385 493 aa16.65■□□□□ 0.26
HNRNPU-226ENST00000640218 PLEKHM2Q8IWE5 1019 aa16.65■□□□□ 0.26
HNRNPU-226ENST00000640218 SAP30BPQ9UHR5 308 aaKnown RBP16.65■□□□□ 0.26
HNRNPU-226ENST00000640218 NPATQ14207 1427 aa16.64■□□□□ 0.26
HNRNPU-226ENST00000640218 GCP02774 474 aa16.64■□□□□ 0.26
HNRNPU-226ENST00000640218 CCDC42Q96M95 316 aa16.64■□□□□ 0.26
HNRNPU-226ENST00000640218 CHMLP26374 656 aa16.64■□□□□ 0.25
HNRNPU-226ENST00000640218 CCDC50Q8IVM0 306 aa16.64■□□□□ 0.25
HNRNPU-226ENST00000640218 LRRC45Q96CN5 670 aa16.64■□□□□ 0.25
HNRNPU-226ENST00000640218 CAPZA3Q96KX2 299 aa16.64■□□□□ 0.25
HNRNPU-226ENST00000640218 SP4Q02446 784 aa16.64■□□□□ 0.25
HNRNPU-226ENST00000640218 KCNA4P22459 653 aa16.64■□□□□ 0.25
HNRNPU-226ENST00000640218 NCBP1Q09161 790 aaKnown RBP16.64■□□□□ 0.25
HNRNPU-226ENST00000640218 HS2ST1Q7LGA3 356 aa16.64■□□□□ 0.25
HNRNPU-226ENST00000640218 LMBR1Q8WVP7 490 aa16.64■□□□□ 0.25
HNRNPU-226ENST00000640218 C6orf163Q5TEZ5 329 aa16.64■□□□□ 0.25
HNRNPU-226ENST00000640218 SOS1Q07889 1333 aaPredicted RBP16.64■□□□□ 0.25
HNRNPU-226ENST00000640218 KRT86O43790 486 aa16.64■□□□□ 0.25
HNRNPU-226ENST00000640218 ARL1P40616 181 aaPredicted RBP16.64■□□□□ 0.25
HNRNPU-226ENST00000640218 MBD4O95243 580 aa16.63■□□□□ 0.25
HNRNPU-226ENST00000640218 KARSQ15046 597 aaKnown RBP16.63■□□□□ 0.25
HNRNPU-226ENST00000640218 OTUD6BQ8N6M0 293 aa16.63■□□□□ 0.25
HNRNPU-226ENST00000640218 SREK1Q8WXA9 508 aaKnown RBP16.63■□□□□ 0.25
HNRNPU-226ENST00000640218 BRAPQ7Z569 592 aa16.63■□□□□ 0.25
HNRNPU-226ENST00000640218 B4DLN1 442 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms