RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 PNMA6EA0A0J9YXQ4 647 aa9.85□□□□□ -0.83
SCARB2-220ENST00000640076 ATP8B2P98198 1209 aa9.85□□□□□ -0.83
SCARB2-220ENST00000640076 MTX1Q13505 466 aa9.85□□□□□ -0.83
SCARB2-220ENST00000640076 TSNAXIP1Q2TAA8 658 aa9.85□□□□□ -0.83
SCARB2-220ENST00000640076 EPHA10Q5JZY3 1008 aa9.85□□□□□ -0.83
SCARB2-220ENST00000640076 TMEM121BQ9BXQ6 578 aaPredicted RBP9.85□□□□□ -0.83
SCARB2-220ENST00000640076 PRDM16Q9HAZ2 1276 aa9.85□□□□□ -0.83
SCARB2-220ENST00000640076 TRMT112Q9UI30 125 aaKnown RBP9.85□□□□□ -0.83
SCARB2-220ENST00000640076 TRPC6Q9Y210 931 aa9.85□□□□□ -0.83
SCARB2-220ENST00000640076 CDHR2Q9BYE9 1310 aa9.85□□□□□ -0.83
SCARB2-220ENST00000640076 NTSR2O95665 410 aa9.84□□□□□ -0.83
SCARB2-220ENST00000640076 CTDSPL2Q05D32 466 aa9.84□□□□□ -0.83
SCARB2-220ENST00000640076 RABL6Q3YEC7 729 aaPredicted RBP9.84□□□□□ -0.83
SCARB2-220ENST00000640076 PPP1R42Q7Z4L9 355 aa9.84□□□□□ -0.83
SCARB2-220ENST00000640076 SYNE4Q8N205 404 aa9.84□□□□□ -0.83
SCARB2-220ENST00000640076 UTP14AQ9BVJ6 771 aaKnown RBP9.84□□□□□ -0.83
SCARB2-220ENST00000640076 SH3TC1Q8TE82 1336 aa9.84□□□□□ -0.83
SCARB2-220ENST00000640076 HMMRO75330 724 aa9.84□□□□□ -0.83
SCARB2-220ENST00000640076 FOXO4P98177 505 aa9.84□□□□□ -0.83
SCARB2-220ENST00000640076 BICDL1Q6ZP65 573 aa9.84□□□□□ -0.83
SCARB2-220ENST00000640076 SSH3Q8TE77 659 aa9.84□□□□□ -0.83
SCARB2-220ENST00000640076 SETDB2Q96T68 719 aa9.84□□□□□ -0.83
SCARB2-220ENST00000640076 FAM177BA6PVY3 158 aa9.83□□□□□ -0.84
SCARB2-220ENST00000640076 SRGAP3O43295 1099 aa9.83□□□□□ -0.84
SCARB2-220ENST00000640076 NFIXQ14938 502 aa9.83□□□□□ -0.84
SCARB2-220ENST00000640076 SMC5Q8IY18 1101 aa9.83□□□□□ -0.84
SCARB2-220ENST00000640076 PLA2G12BQ9BX93 195 aa9.83□□□□□ -0.84
SCARB2-220ENST00000640076 MYH3P11055 1940 aa9.83□□□□□ -0.84
SCARB2-220ENST00000640076 CARMIL3Q8ND23 1372 aa9.83□□□□□ -0.84
SCARB2-220ENST00000640076 IRS4O14654 1257 aaPredicted RBP9.83□□□□□ -0.84
SCARB2-220ENST00000640076 CLP1Q92989 425 aaKnown RBP9.83□□□□□ -0.84
SCARB2-220ENST00000640076 LAMB2P55268 1798 aa9.82□□□□□ -0.84
SCARB2-220ENST00000640076 DDX60Q8IY21 1712 aaKnown RBP9.82□□□□□ -0.84
SCARB2-220ENST00000640076 TM4SF1P30408 202 aa9.82□□□□□ -0.84
SCARB2-220ENST00000640076 LMBR1LQ6UX01 489 aa9.82□□□□□ -0.84
SCARB2-220ENST00000640076 TTC13Q8NBP0 860 aa9.82□□□□□ -0.84
SCARB2-220ENST00000640076 NYXQ9GZU5 481 aa9.82□□□□□ -0.84
SCARB2-220ENST00000640076 DCTPP1Q9H773 170 aa9.82□□□□□ -0.84
SCARB2-220ENST00000640076 PDE8AO60658 829 aa9.81□□□□□ -0.84
SCARB2-220ENST00000640076 NBPF5PQ86XG9 351 aaPredicted RBP9.81□□□□□ -0.84
SCARB2-220ENST00000640076 NLGN1Q8N2Q7 840 aa9.81□□□□□ -0.84
SCARB2-220ENST00000640076 SLAIN1Q8ND83 568 aa9.81□□□□□ -0.84
SCARB2-220ENST00000640076 GCC1Q96CN9 775 aa9.81□□□□□ -0.84
SCARB2-220ENST00000640076 CSF1RP07333 972 aa9.81□□□□□ -0.84
SCARB2-220ENST00000640076 HCLS1P14317 486 aaPredicted RBP9.81□□□□□ -0.84
SCARB2-220ENST00000640076 CTSWP56202 376 aa9.81□□□□□ -0.84
SCARB2-220ENST00000640076 ERFEQ4G0M1 354 aa9.81□□□□□ -0.84
SCARB2-220ENST00000640076 TPTE2Q6XPS3 522 aa9.81□□□□□ -0.84
SCARB2-220ENST00000640076 ILDR2Q71H61 639 aa9.81□□□□□ -0.84
SCARB2-220ENST00000640076 ABCC12Q96J65 1359 aa9.81□□□□□ -0.84
SCARB2-220ENST00000640076 FAM196BA6NMK8 535 aa9.8□□□□□ -0.84
SCARB2-220ENST00000640076 GTF2E1P29083 439 aaPredicted RBP9.8□□□□□ -0.84
SCARB2-220ENST00000640076 RFX5P48382 616 aaPredicted RBP9.8□□□□□ -0.84
SCARB2-220ENST00000640076 DDR1Q08345 913 aa9.8□□□□□ -0.84
SCARB2-220ENST00000640076 SLC10A5Q5PT55 438 aa9.8□□□□□ -0.84
SCARB2-220ENST00000640076 TTLL11Q8NHH1 800 aa9.8□□□□□ -0.84
SCARB2-220ENST00000640076 RBM46Q8TBY0 533 aaKnown RBP9.8□□□□□ -0.84
SCARB2-220ENST00000640076 MICAL1Q8TDZ2 1067 aa9.8□□□□□ -0.84
SCARB2-220ENST00000640076 PIK3R5Q8WYR1 880 aa9.8□□□□□ -0.84
SCARB2-220ENST00000640076 TMA7Q9Y2S6 64 aaKnown RBP9.8□□□□□ -0.84
SCARB2-220ENST00000640076 PCDHGA10Q9Y5H3 936 aa9.8□□□□□ -0.84
SCARB2-220ENST00000640076 POLRMTO00411 1230 aaKnown RBP9.79□□□□□ -0.84
SCARB2-220ENST00000640076 CNBD1Q8NA66 436 aa9.79□□□□□ -0.84
SCARB2-220ENST00000640076 LRRN4Q8WUT4 740 aa9.79□□□□□ -0.84
SCARB2-220ENST00000640076 BACH2Q9BYV9 841 aa9.79□□□□□ -0.84
SCARB2-220ENST00000640076 LNPKQ9C0E8 428 aa9.79□□□□□ -0.84
SCARB2-220ENST00000640076 PDGFDQ9GZP0 370 aaPredicted RBP9.79□□□□□ -0.84
SCARB2-220ENST00000640076 EXOC6BQ9Y2D4 811 aa9.79□□□□□ -0.84
SCARB2-220ENST00000640076 NOP58Q9Y2X3 529 aaKnown RBP9.79□□□□□ -0.84
SCARB2-220ENST00000640076 CHMP3Q9Y3E7 222 aa9.79□□□□□ -0.84
SCARB2-220ENST00000640076 SURF6O75683 361 aaKnown RBP9.79□□□□□ -0.84
SCARB2-220ENST00000640076 SERPINB2P05120 415 aa9.79□□□□□ -0.84
SCARB2-220ENST00000640076 NUCB1Q02818 461 aa9.79□□□□□ -0.84
SCARB2-220ENST00000640076 PTPN12Q05209 780 aaKnown RBP9.79□□□□□ -0.84
SCARB2-220ENST00000640076 MSL1Q68DK7 614 aa9.79□□□□□ -0.84
SCARB2-220ENST00000640076 SULF1Q8IWU6 871 aa9.79□□□□□ -0.84
SCARB2-220ENST00000640076 EPS8L1Q8TE68 723 aa9.79□□□□□ -0.84
SCARB2-220ENST00000640076 COPRSQ9NQ92 184 aa9.79□□□□□ -0.84
SCARB2-220ENST00000640076 CUEDC1Q9NWM3 386 aaPredicted RBP9.79□□□□□ -0.84
SCARB2-220ENST00000640076 PDZRN3Q9UPQ7 1066 aa9.79□□□□□ -0.84
SCARB2-220ENST00000640076 PA2G4Q9UQ80 394 aaKnown RBP9.79□□□□□ -0.84
SCARB2-220ENST00000640076 CASZ1Q86V15 1759 aa9.78□□□□□ -0.84
SCARB2-220ENST00000640076 NRXN2Q9P2S2 1712 aa9.78□□□□□ -0.84
SCARB2-220ENST00000640076 MMP10P09238 476 aa9.78□□□□□ -0.84
SCARB2-220ENST00000640076 PRKAR2AP13861 404 aaKnown RBP9.78□□□□□ -0.84
SCARB2-220ENST00000640076 ATP2B4P23634 1241 aa9.78□□□□□ -0.84
SCARB2-220ENST00000640076 HDLBPQ00341 1268 aaKnown RBP9.78□□□□□ -0.84
SCARB2-220ENST00000640076 CCDC57Q2TAC2 916 aa9.78□□□□□ -0.84
SCARB2-220ENST00000640076 PRR5LQ6MZQ0 368 aa9.78□□□□□ -0.84
SCARB2-220ENST00000640076 C3orf67Q6ZVT6 689 aa9.78□□□□□ -0.84
SCARB2-220ENST00000640076 KLHDC4Q8TBB5 520 aa9.78□□□□□ -0.84
SCARB2-220ENST00000640076 CCDC85AQ96PX6 553 aaPredicted RBP9.78□□□□□ -0.84
SCARB2-220ENST00000640076 DNAJC2Q99543 621 aaKnown RBP9.78□□□□□ -0.84
SCARB2-220ENST00000640076 GREM2Q9H772 168 aa9.78□□□□□ -0.84
SCARB2-220ENST00000640076 RBM27Q9P2N5 1060 aaKnown RBP9.78□□□□□ -0.84
SCARB2-220ENST00000640076 RIC1Q4ADV7 1423 aa9.78□□□□□ -0.84
SCARB2-220ENST00000640076 RTL9Q8NET4 1388 aa9.78□□□□□ -0.84
SCARB2-220ENST00000640076 NPHP1O15259 732 aa9.77□□□□□ -0.84
SCARB2-220ENST00000640076 IFIT5Q13325 482 aaKnown RBP9.77□□□□□ -0.84
SCARB2-220ENST00000640076 SF3B3Q15393 1217 aaKnown RBP9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms