RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 APOBEC3FQ8IUX4 373 aaKnown RBP23.75■■□□□ 1.39
CLN6-221ENST00000637494 RIPOR2Q9Y4F9 1068 aa23.75■■□□□ 1.39
CLN6-221ENST00000637494 KIF16BQ96L93 1317 aa23.75■■□□□ 1.39
CLN6-221ENST00000637494 ZNF646O15015 1829 aaPredicted RBP23.75■■□□□ 1.39
CLN6-221ENST00000637494 CA12O43570 354 aa23.74■■□□□ 1.39
CLN6-221ENST00000637494 SASH1O94885 1247 aa23.74■■□□□ 1.39
CLN6-221ENST00000637494 ZNF157P51786 506 aaPredicted RBP23.74■■□□□ 1.39
CLN6-221ENST00000637494 MYO1BO43795 1136 aa23.73■■□□□ 1.39
CLN6-221ENST00000637494 HSPA8P11142 646 aaKnown RBP23.73■■□□□ 1.39
CLN6-221ENST00000637494 CAVIN4Q5BKX8 364 aa23.73■■□□□ 1.39
CLN6-221ENST00000637494 F8W031 263 aaPredicted RBP23.72■■□□□ 1.39
CLN6-221ENST00000637494 GYG1P46976 350 aa23.72■■□□□ 1.39
CLN6-221ENST00000637494 RARSP54136 660 aaKnown RBP23.72■■□□□ 1.39
CLN6-221ENST00000637494 FRAT2O75474 233 aaPredicted RBP23.71■■□□□ 1.39
CLN6-221ENST00000637494 TTLL12Q14166 644 aaPredicted RBP23.71■■□□□ 1.39
CLN6-221ENST00000637494 LRRC24Q50LG9 513 aa23.71■■□□□ 1.39
CLN6-221ENST00000637494 CERS5Q8N5B7 392 aa23.71■■□□□ 1.39
CLN6-221ENST00000637494 FAM205AQ6ZU69 1335 aa23.7■■□□□ 1.38
CLN6-221ENST00000637494 IPO8O15397 1037 aaKnown RBP23.7■■□□□ 1.38
CLN6-221ENST00000637494 PDE8BO95263 885 aa23.7■■□□□ 1.38
CLN6-221ENST00000637494 RBM5P52756 815 aaKnown RBP eCLIP23.7■■□□□ 1.38
CLN6-221ENST00000637494 TDRD7Q8NHU6 1098 aaKnown RBP23.7■■□□□ 1.38
CLN6-221ENST00000637494 ARHGAP45Q92619 1136 aa23.7■■□□□ 1.38
CLN6-221ENST00000637494 FAM84BQ96KN1 310 aaPredicted RBP23.7■■□□□ 1.38
CLN6-221ENST00000637494 JAG2Q9Y219 1238 aa23.7■■□□□ 1.38
CLN6-221ENST00000637494 MIER1Q8N108 512 aa23.69■■□□□ 1.38
CLN6-221ENST00000637494 MTMR14Q8NCE2 650 aa23.69■■□□□ 1.38
CLN6-221ENST00000637494 SCAF8Q9UPN6 1271 aaKnown RBP23.69■■□□□ 1.38
CLN6-221ENST00000637494 PAPPA2Q9BXP8 1791 aa23.69■■□□□ 1.38
CLN6-221ENST00000637494 IFIT1P09914 478 aaKnown RBP23.68■■□□□ 1.38
CLN6-221ENST00000637494 CFAP100Q494V2 611 aa23.68■■□□□ 1.38
CLN6-221ENST00000637494 MFSD14BQ5SR56 506 aa23.68■■□□□ 1.38
CLN6-221ENST00000637494 KLHDC4Q8TBB5 520 aa23.68■■□□□ 1.38
CLN6-221ENST00000637494 ZBED3Q96IU2 234 aaPredicted RBP23.68■■□□□ 1.38
CLN6-221ENST00000637494 EYA2O00167 538 aa23.67■■□□□ 1.38
CLN6-221ENST00000637494 HNRNPUQ00839 825 aaKnown RBP eCLIP23.67■■□□□ 1.38
CLN6-221ENST00000637494 PUM3Q15397 648 aaKnown RBP23.67■■□□□ 1.38
CLN6-221ENST00000637494 PRAMEF18Q5VWM3 479 aa23.67■■□□□ 1.38
CLN6-221ENST00000637494 FAM155AB1AL88 458 aaPredicted RBP23.66■■□□□ 1.38
CLN6-221ENST00000637494 CAPN15O75808 1086 aa23.66■■□□□ 1.38
CLN6-221ENST00000637494 SLC10A3P09131 477 aa23.66■■□□□ 1.38
CLN6-221ENST00000637494 ARMC9Q7Z3E5 817 aa23.66■■□□□ 1.38
CLN6-221ENST00000637494 FBXO3Q9UK99 471 aa23.66■■□□□ 1.38
CLN6-221ENST00000637494 COL1A1P02452 1464 aaPredicted RBP23.66■■□□□ 1.38
CLN6-221ENST00000637494 GNAI3P08754 354 aa23.65■■□□□ 1.38
CLN6-221ENST00000637494 KIF23Q02241 960 aaPredicted RBP23.65■■□□□ 1.38
CLN6-221ENST00000637494 FBXO33Q7Z6M2 555 aa23.65■■□□□ 1.38
CLN6-221ENST00000637494 REM2Q8IYK8 340 aaPredicted RBP23.65■■□□□ 1.38
CLN6-221ENST00000637494 VGLL2Q8N8G2 317 aa23.65■■□□□ 1.38
CLN6-221ENST00000637494 TBC1D22AQ8WUA7 517 aa23.65■■□□□ 1.38
CLN6-221ENST00000637494 TTF2Q9UNY4 1162 aaKnown RBP23.65■■□□□ 1.38
CLN6-221ENST00000637494 PPP2R3BQ9Y5P8 575 aa23.65■■□□□ 1.38
CLN6-221ENST00000637494 SPDYE2BA6NHP3 402 aa23.64■■□□□ 1.37
CLN6-221ENST00000637494 SPDYE6P0CI01 402 aa23.64■■□□□ 1.37
CLN6-221ENST00000637494 SLC5A1P13866 664 aa23.64■■□□□ 1.37
CLN6-221ENST00000637494 PTPN12Q05209 780 aaKnown RBP23.64■■□□□ 1.37
CLN6-221ENST00000637494 CHAF1AQ13111 956 aaPredicted RBP23.64■■□□□ 1.37
CLN6-221ENST00000637494 FRAT1Q92837 279 aaPredicted RBP23.64■■□□□ 1.37
CLN6-221ENST00000637494 DEFB129Q9H1M3 183 aa23.64■■□□□ 1.37
CLN6-221ENST00000637494 SERPINA10Q9UK55 444 aa23.64■■□□□ 1.37
CLN6-221ENST00000637494 LRRFIP2Q9Y608 721 aaKnown RBP23.64■■□□□ 1.37
CLN6-221ENST00000637494 UBE2Q2LH0YL09 131 aa23.63■■□□□ 1.37
CLN6-221ENST00000637494 RFX5P48382 616 aaPredicted RBP23.63■■□□□ 1.37
CLN6-221ENST00000637494 INTS3Q68E01 1043 aaKnown RBP23.63■■□□□ 1.37
CLN6-221ENST00000637494 VEZTQ9HBM0 779 aa23.63■■□□□ 1.37
CLN6-221ENST00000637494 TSKSQ9UJT2 592 aa23.63■■□□□ 1.37
CLN6-221ENST00000637494 IQSEC3Q9UPP2 1182 aaPredicted RBP23.63■■□□□ 1.37
CLN6-221ENST00000637494 TNFAIP1Q13829 316 aa23.62■■□□□ 1.37
CLN6-221ENST00000637494 RASAL3Q86YV0 1011 aa23.62■■□□□ 1.37
CLN6-221ENST00000637494 LPIN2Q92539 896 aa23.62■■□□□ 1.37
CLN6-221ENST00000637494 ZIC5Q96T25 663 aa23.62■■□□□ 1.37
CLN6-221ENST00000637494 SIL1Q9H173 461 aa23.62■■□□□ 1.37
CLN6-221ENST00000637494 CEP126Q9P2H0 1117 aa23.62■■□□□ 1.37
CLN6-221ENST00000637494 CLRN2A0PK11 232 aa23.61■■□□□ 1.37
CLN6-221ENST00000637494 CIAO1O76071 339 aa23.61■■□□□ 1.37
CLN6-221ENST00000637494 SUPT20HL1Q3ZLR7 823 aa23.61■■□□□ 1.37
CLN6-221ENST00000637494 MOB2Q70IA6 237 aa23.61■■□□□ 1.37
CLN6-221ENST00000637494 PRMT6Q96LA8 375 aaPredicted RBP23.61■■□□□ 1.37
CLN6-221ENST00000637494 MEIS3Q99687 375 aa23.61■■□□□ 1.37
CLN6-221ENST00000637494 ECM29Q5VYK3 1845 aa23.61■■□□□ 1.37
CLN6-221ENST00000637494 BCAMP50895 628 aa23.6■■□□□ 1.37
CLN6-221ENST00000637494 PRKG1Q13976 671 aa23.6■■□□□ 1.37
CLN6-221ENST00000637494 ATF7IPQ6VMQ6 1270 aa23.6■■□□□ 1.37
CLN6-221ENST00000637494 SAGE1Q9NXZ1 904 aa23.6■■□□□ 1.37
CLN6-221ENST00000637494 PPP1R12BO60237 982 aaPredicted RBP23.59■■□□□ 1.37
CLN6-221ENST00000637494 FGFR2P21802 821 aa23.59■■□□□ 1.37
CLN6-221ENST00000637494 IL15P40933 162 aaPredicted RBP23.59■■□□□ 1.37
CLN6-221ENST00000637494 PCDHAC2Q9Y5I4 1007 aa23.59■■□□□ 1.37
CLN6-221ENST00000637494 ARAP2Q8WZ64 1704 aa23.59■■□□□ 1.37
CLN6-221ENST00000637494 MAST3O60307 1309 aa23.59■■□□□ 1.37
CLN6-221ENST00000637494 BCAR3O75815 825 aa23.58■■□□□ 1.37
CLN6-221ENST00000637494 ATP2B3Q16720 1220 aa23.58■■□□□ 1.37
CLN6-221ENST00000637494 ATG9AQ7Z3C6 839 aa23.58■■□□□ 1.37
CLN6-221ENST00000637494 GNL3LQ9NVN8 582 aaKnown RBP23.58■■□□□ 1.37
CLN6-221ENST00000637494 ANGEL1Q9UNK9 670 aaKnown RBP23.58■■□□□ 1.37
CLN6-221ENST00000637494 TRIM27P14373 513 aa23.57■■□□□ 1.36
CLN6-221ENST00000637494 CRKP46108 304 aa23.57■■□□□ 1.36
CLN6-221ENST00000637494 TNNI2P48788 182 aa23.57■■□□□ 1.36
CLN6-221ENST00000637494 HDLBPQ00341 1268 aaKnown RBP23.57■■□□□ 1.36
CLN6-221ENST00000637494 DZIP1LQ8IYY4 767 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms