RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SAPCD2Q86UD0 394 aa17.23■□□□□ 0.35
PNKP-228ENST00000637325 C2orf69Q8N8R5 385 aa17.23■□□□□ 0.35
PNKP-228ENST00000637325 AIDAQ96BJ3 306 aa17.23■□□□□ 0.35
PNKP-228ENST00000637325 FAM84BQ96KN1 310 aaPredicted RBP17.23■□□□□ 0.35
PNKP-228ENST00000637325 PITPNM2Q9BZ72 1349 aa17.22■□□□□ 0.35
PNKP-228ENST00000637325 WNT10BO00744 389 aa17.22■□□□□ 0.35
PNKP-228ENST00000637325 FRAT2O75474 233 aaPredicted RBP17.22■□□□□ 0.35
PNKP-228ENST00000637325 FKBP1AP62942 108 aaKnown RBP17.22■□□□□ 0.35
PNKP-228ENST00000637325 PTPN12Q05209 780 aaKnown RBP17.22■□□□□ 0.35
PNKP-228ENST00000637325 ZKSCAN2Q63HK3 967 aa17.22■□□□□ 0.35
PNKP-228ENST00000637325 TDRD7Q8NHU6 1098 aaKnown RBP17.22■□□□□ 0.35
PNKP-228ENST00000637325 CLUAP1Q96AJ1 413 aa17.22■□□□□ 0.35
PNKP-228ENST00000637325 CDCA5Q96FF9 252 aa17.22■□□□□ 0.35
PNKP-228ENST00000637325 GBA2Q9HCG7 927 aaPredicted RBP17.22■□□□□ 0.35
PNKP-228ENST00000637325 IFIT1P09914 478 aaKnown RBP17.21■□□□□ 0.35
PNKP-228ENST00000637325 HUNKP57058 714 aa17.21■□□□□ 0.35
PNKP-228ENST00000637325 PUM3Q15397 648 aaKnown RBP17.21■□□□□ 0.35
PNKP-228ENST00000637325 DLGAP5Q15398 846 aa17.21■□□□□ 0.35
PNKP-228ENST00000637325 CERS5Q8N5B7 392 aa17.21■□□□□ 0.35
PNKP-228ENST00000637325 SIL1Q9H173 461 aa17.21■□□□□ 0.35
PNKP-228ENST00000637325 FAM205AQ6ZU69 1335 aa17.21■□□□□ 0.34
PNKP-228ENST00000637325 SLC5A1P13866 664 aa17.2■□□□□ 0.34
PNKP-228ENST00000637325 MAP2K1Q02750 393 aaPredicted RBP17.2■□□□□ 0.34
PNKP-228ENST00000637325 FBXO33Q7Z6M2 555 aa17.2■□□□□ 0.34
PNKP-228ENST00000637325 VGLL2Q8N8G2 317 aa17.2■□□□□ 0.34
PNKP-228ENST00000637325 HHIPL1Q96JK4 782 aa17.2■□□□□ 0.34
PNKP-228ENST00000637325 FBXO3Q9UK99 471 aa17.2■□□□□ 0.34
PNKP-228ENST00000637325 SCAF8Q9UPN6 1271 aaKnown RBP17.2■□□□□ 0.34
PNKP-228ENST00000637325 TNNQ9UQP3 1299 aa17.2■□□□□ 0.34
PNKP-228ENST00000637325 RBM5P52756 815 aaKnown RBP eCLIP17.19■□□□□ 0.34
PNKP-228ENST00000637325 CHAF1AQ13111 956 aaPredicted RBP17.19■□□□□ 0.34
PNKP-228ENST00000637325 MFSD14BQ5SR56 506 aa17.19■□□□□ 0.34
PNKP-228ENST00000637325 CEP126Q9P2H0 1117 aa17.19■□□□□ 0.34
PNKP-228ENST00000637325 IQSEC3Q9UPP2 1182 aaPredicted RBP17.19■□□□□ 0.34
PNKP-228ENST00000637325 ARAP2Q8WZ64 1704 aa17.18■□□□□ 0.34
PNKP-228ENST00000637325 MYO1BO43795 1136 aa17.18■□□□□ 0.34
PNKP-228ENST00000637325 CIAO1O76071 339 aa17.18■□□□□ 0.34
PNKP-228ENST00000637325 GNAI2P04899 355 aa17.18■□□□□ 0.34
PNKP-228ENST00000637325 CFAP100Q494V2 611 aa17.18■□□□□ 0.34
PNKP-228ENST00000637325 APOBEC3FQ8IUX4 373 aaKnown RBP17.18■□□□□ 0.34
PNKP-228ENST00000637325 FTSJ3Q8IY81 847 aaKnown RBP17.18■□□□□ 0.34
PNKP-228ENST00000637325 BEGAINQ9BUH8 593 aa17.18■□□□□ 0.34
PNKP-228ENST00000637325 SRGAP3O43295 1099 aa17.17■□□□□ 0.34
PNKP-228ENST00000637325 AOC2O75106 756 aa17.17■□□□□ 0.34
PNKP-228ENST00000637325 FGFR2P21802 821 aa17.17■□□□□ 0.34
PNKP-228ENST00000637325 MAP2K2P36507 400 aa17.17■□□□□ 0.34
PNKP-228ENST00000637325 IL15P40933 162 aaPredicted RBP17.17■□□□□ 0.34
PNKP-228ENST00000637325 BCAMP50895 628 aa17.17■□□□□ 0.34
PNKP-228ENST00000637325 ATG9AQ7Z3C6 839 aa17.17■□□□□ 0.34
PNKP-228ENST00000637325 TMEM57Q8N5G2 664 aa17.17■□□□□ 0.34
PNKP-228ENST00000637325 LPIN2Q92539 896 aa17.17■□□□□ 0.34
PNKP-228ENST00000637325 WBP1LQ9NX94 342 aa17.17■□□□□ 0.34
PNKP-228ENST00000637325 TTF2Q9UNY4 1162 aaKnown RBP17.17■□□□□ 0.34
PNKP-228ENST00000637325 PA2G4Q9UQ80 394 aaKnown RBP17.17■□□□□ 0.34
PNKP-228ENST00000637325 AKAP11Q9UKA4 1901 aa17.17■□□□□ 0.34
PNKP-228ENST00000637325 FOXN1O15353 648 aa17.16■□□□□ 0.34
PNKP-228ENST00000637325 NF2P35240 595 aa17.16■□□□□ 0.34
PNKP-228ENST00000637325 TTLL12Q14166 644 aaPredicted RBP17.16■□□□□ 0.34
PNKP-228ENST00000637325 ATP2B3Q16720 1220 aa17.16■□□□□ 0.34
PNKP-228ENST00000637325 PRAMEF18Q5VWM3 479 aa17.16■□□□□ 0.34
PNKP-228ENST00000637325 RGMBQ6NW40 437 aa17.16■□□□□ 0.34
PNKP-228ENST00000637325 MTMR14Q8NCE2 650 aa17.16■□□□□ 0.34
PNKP-228ENST00000637325 TBC1D22AQ8WUA7 517 aa17.16■□□□□ 0.34
PNKP-228ENST00000637325 ZBED3Q96IU2 234 aaPredicted RBP17.16■□□□□ 0.34
PNKP-228ENST00000637325 COPRSQ9NQ92 184 aa17.16■□□□□ 0.34
PNKP-228ENST00000637325 PAPPA2Q9BXP8 1791 aa17.15■□□□□ 0.34
PNKP-228ENST00000637325 THSD7BQ9C0I4 1608 aa17.15■□□□□ 0.34
PNKP-228ENST00000637325 CTCFP49711 727 aaPredicted RBP17.15■□□□□ 0.34
PNKP-228ENST00000637325 ZNF157P51786 506 aaPredicted RBP17.15■□□□□ 0.34
PNKP-228ENST00000637325 DZIP1LQ8IYY4 767 aaKnown RBP17.15■□□□□ 0.34
PNKP-228ENST00000637325 FKBP1BP68106 108 aa17.14■□□□□ 0.33
PNKP-228ENST00000637325 COL13A1Q5TAT6 717 aaPredicted RBP17.14■□□□□ 0.33
PNKP-228ENST00000637325 CCDC102AQ96A19 550 aa17.14■□□□□ 0.33
PNKP-228ENST00000637325 VEZTQ9HBM0 779 aa17.14■□□□□ 0.33
PNKP-228ENST00000637325 PCDHAC2Q9Y5I4 1007 aa17.14■□□□□ 0.33
PNKP-228ENST00000637325 CLRN2A0PK11 232 aa17.13■□□□□ 0.33
PNKP-228ENST00000637325 SPDYE2BA6NHP3 402 aa17.13■□□□□ 0.33
PNKP-228ENST00000637325 SPDYE6P0CI01 402 aa17.13■□□□□ 0.33
PNKP-228ENST00000637325 NOGQ13253 232 aa17.13■□□□□ 0.33
PNKP-228ENST00000637325 MTX1Q13505 466 aa17.13■□□□□ 0.33
PNKP-228ENST00000637325 ITPRIPQ8IWB1 547 aa17.13■□□□□ 0.33
PNKP-228ENST00000637325 PRMT6Q96LA8 375 aaPredicted RBP17.13■□□□□ 0.33
PNKP-228ENST00000637325 GNL3LQ9NVN8 582 aaKnown RBP17.13■□□□□ 0.33
PNKP-228ENST00000637325 SERPINA10Q9UK55 444 aa17.13■□□□□ 0.33
PNKP-228ENST00000637325 AK9Q5TCS8 1911 aa17.12■□□□□ 0.33
PNKP-228ENST00000637325 DEFB129Q9H1M3 183 aa17.12■□□□□ 0.33
PNKP-228ENST00000637325 UBE2Q2LH0YL09 131 aa17.11■□□□□ 0.33
PNKP-228ENST00000637325 CRKP46108 304 aa17.11■□□□□ 0.33
PNKP-228ENST00000637325 G3BP1Q13283 466 aaKnown RBP eCLIP17.11■□□□□ 0.33
PNKP-228ENST00000637325 ARMC9Q7Z3E5 817 aa17.11■□□□□ 0.33
PNKP-228ENST00000637325 WDR66Q8TBY9 1149 aa17.11■□□□□ 0.33
PNKP-228ENST00000637325 AKAP2Q9Y2D5 859 aa17.11■□□□□ 0.33
PNKP-228ENST00000637325 COL1A1P02452 1464 aaPredicted RBP17.11■□□□□ 0.33
PNKP-228ENST00000637325 CASP8AP2Q9UKL3 1982 aa17.1■□□□□ 0.33
PNKP-228ENST00000637325 LBX1P52954 281 aa17.1■□□□□ 0.33
PNKP-228ENST00000637325 PRKG1Q13976 671 aa17.1■□□□□ 0.33
PNKP-228ENST00000637325 MOB2Q70IA6 237 aa17.1■□□□□ 0.33
PNKP-228ENST00000637325 SUGT1Q9Y2Z0 365 aa17.1■□□□□ 0.33
PNKP-228ENST00000637325 PPP2R3BQ9Y5P8 575 aa17.1■□□□□ 0.33
PNKP-228ENST00000637325 PNMA6EA0A0J9YXQ4 647 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms