RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 GPRC5DQ9NZD1 345 aa11.3□□□□□ -0.6
CACNA1A-239ENST00000637297 ZBTB47Q9UFB7 747 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-239ENST00000637297 JAG2Q9Y219 1238 aa11.3□□□□□ -0.6
CACNA1A-239ENST00000637297 PCDHB15Q9Y5E8 787 aa11.3□□□□□ -0.6
CACNA1A-239ENST00000637297 MYO3BQ8WXR4 1341 aa11.3□□□□□ -0.6
CACNA1A-239ENST00000637297 POTECB2RU33 542 aa11.29□□□□□ -0.6
CACNA1A-239ENST00000637297 KIF3CO14782 793 aa11.29□□□□□ -0.6
CACNA1A-239ENST00000637297 ADORA1P30542 326 aa11.29□□□□□ -0.6
CACNA1A-239ENST00000637297 EPS15P42566 896 aa11.29□□□□□ -0.6
CACNA1A-239ENST00000637297 SCNN1DP51172 638 aa11.29□□□□□ -0.6
CACNA1A-239ENST00000637297 TNNI3KQ59H18 835 aa11.29□□□□□ -0.6
CACNA1A-239ENST00000637297 CCDC158Q5M9N0 1113 aa11.29□□□□□ -0.6
CACNA1A-239ENST00000637297 DACT2Q5SW24 774 aa11.29□□□□□ -0.6
CACNA1A-239ENST00000637297 RBM26Q5T8P6 1007 aaKnown RBP11.29□□□□□ -0.6
CACNA1A-239ENST00000637297 CCDC102BQ68D86 513 aa11.29□□□□□ -0.6
CACNA1A-239ENST00000637297 MICALL2Q8IY33 904 aa11.29□□□□□ -0.6
CACNA1A-239ENST00000637297 TAF1DQ9H5J8 278 aaPredicted RBP11.29□□□□□ -0.6
CACNA1A-239ENST00000637297 ADARB2Q9NS39 739 aaKnown RBP11.29□□□□□ -0.6
CACNA1A-239ENST00000637297 HDAC9Q9UKV0 1011 aa11.29□□□□□ -0.6
CACNA1A-239ENST00000637297 FPGT-TNNI3KV9GXZ4 949 aa11.29□□□□□ -0.6
CACNA1A-239ENST00000637297 IFIT2P09913 472 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-239ENST00000637297 USP17L8P0C7I0 530 aa11.28□□□□□ -0.6
CACNA1A-239ENST00000637297 MFSD14BQ5SR56 506 aa11.28□□□□□ -0.6
CACNA1A-239ENST00000637297 TTC39AQ5SRH9 613 aa11.28□□□□□ -0.6
CACNA1A-239ENST00000637297 AACSQ86V21 672 aa11.28□□□□□ -0.6
CACNA1A-239ENST00000637297 TBC1D22AQ8WUA7 517 aa11.28□□□□□ -0.6
CACNA1A-239ENST00000637297 LRRCC1Q9C099 1032 aa11.28□□□□□ -0.6
CACNA1A-239ENST00000637297 CCDC8Q9H0W5 538 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-239ENST00000637297 RWDD1Q9H446 243 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-239ENST00000637297 DCTPP1Q9H773 170 aa11.28□□□□□ -0.6
CACNA1A-239ENST00000637297 IL1RAPL2Q9NP60 686 aa11.28□□□□□ -0.6
CACNA1A-239ENST00000637297 DENND2AQ9ULE3 1009 aa11.28□□□□□ -0.6
CACNA1A-239ENST00000637297 ARAP2Q8WZ64 1704 aa11.28□□□□□ -0.6
CACNA1A-239ENST00000637297 ZNF609O15014 1411 aa11.27□□□□□ -0.6
CACNA1A-239ENST00000637297 POLR2AP24928 1970 aaKnown RBP11.27□□□□□ -0.61
CACNA1A-239ENST00000637297 F8W031 263 aaPredicted RBP11.27□□□□□ -0.61
CACNA1A-239ENST00000637297 SEMA3EO15041 775 aa11.27□□□□□ -0.61
CACNA1A-239ENST00000637297 TOMM70O94826 608 aa11.27□□□□□ -0.61
CACNA1A-239ENST00000637297 UQCRFS1P1P0C7P4 283 aa11.27□□□□□ -0.61
CACNA1A-239ENST00000637297 PHKA1P46020 1223 aa11.27□□□□□ -0.61
CACNA1A-239ENST00000637297 FKBP1AP62942 108 aaKnown RBP11.27□□□□□ -0.61
CACNA1A-239ENST00000637297 USP50Q70EL3 339 aaPredicted RBP11.27□□□□□ -0.61
CACNA1A-239ENST00000637297 KIAA0825Q8IV33 1275 aa11.27□□□□□ -0.61
CACNA1A-239ENST00000637297 WDR66Q8TBY9 1149 aa11.27□□□□□ -0.61
CACNA1A-239ENST00000637297 MXD3Q9BW11 206 aa11.27□□□□□ -0.61
CACNA1A-239ENST00000637297 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.27□□□□□ -0.61
CACNA1A-239ENST00000637297 FAM205AQ6ZU69 1335 aa11.27□□□□□ -0.61
CACNA1A-239ENST00000637297 MMP14P50281 582 aa11.26□□□□□ -0.61
CACNA1A-239ENST00000637297 RBM5P52756 815 aaKnown RBP eCLIP11.26□□□□□ -0.61
CACNA1A-239ENST00000637297 TBC1D10BQ4KMP7 808 aaPredicted RBP11.26□□□□□ -0.61
CACNA1A-239ENST00000637297 SAMD7Q7Z3H4 446 aa11.26□□□□□ -0.61
CACNA1A-239ENST00000637297 ZGPATQ8N5A5 531 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-239ENST00000637297 EAF2Q96CJ1 260 aaPredicted RBP11.26□□□□□ -0.61
CACNA1A-239ENST00000637297 DBNDD2Q9BQY9 259 aa11.26□□□□□ -0.61
CACNA1A-239ENST00000637297 SHTN1A0MZ66 631 aa11.25□□□□□ -0.61
CACNA1A-239ENST00000637297 HDAC1Q13547 482 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-239ENST00000637297 KIF4BQ2VIQ3 1234 aa11.25□□□□□ -0.61
CACNA1A-239ENST00000637297 LDHDQ86WU2 507 aa11.25□□□□□ -0.61
CACNA1A-239ENST00000637297 SMC1BQ8NDV3 1235 aa11.25□□□□□ -0.61
CACNA1A-239ENST00000637297 RBM46Q8TBY0 533 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-239ENST00000637297 GCC1Q96CN9 775 aa11.25□□□□□ -0.61
CACNA1A-239ENST00000637297 GMLQ99445 158 aa11.25□□□□□ -0.61
CACNA1A-239ENST00000637297 MYOZ2Q9NPC6 264 aa11.25□□□□□ -0.61
CACNA1A-239ENST00000637297 TTF2Q9UNY4 1162 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-239ENST00000637297 ZNF646O15015 1829 aaPredicted RBP11.24□□□□□ -0.61
CACNA1A-239ENST00000637297 SMARCA5O60264 1052 aaPredicted RBP11.24□□□□□ -0.61
CACNA1A-239ENST00000637297 SPTY2D1Q68D10 685 aaPredicted RBP11.24□□□□□ -0.61
CACNA1A-239ENST00000637297 CHADLQ6NUI6 762 aa11.24□□□□□ -0.61
CACNA1A-239ENST00000637297 CERS5Q8N5B7 392 aa11.24□□□□□ -0.61
CACNA1A-239ENST00000637297 SPATA5Q8NB90 893 aa11.24□□□□□ -0.61
CACNA1A-239ENST00000637297 ABCF2Q9UG63 623 aa11.24□□□□□ -0.61
CACNA1A-239ENST00000637297 DBNLQ9UJU6 430 aaKnown RBP11.24□□□□□ -0.61
CACNA1A-239ENST00000637297 MAST3O60307 1309 aa11.24□□□□□ -0.61
CACNA1A-239ENST00000637297 MYO1BO43795 1136 aa11.23□□□□□ -0.61
CACNA1A-239ENST00000637297 LDHBP07195 334 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-239ENST00000637297 POTEIP0CG38 1075 aa11.23□□□□□ -0.61
CACNA1A-239ENST00000637297 POTEJP0CG39 1038 aa11.23□□□□□ -0.61
CACNA1A-239ENST00000637297 ARID4AP29374 1257 aaPredicted RBP11.23□□□□□ -0.61
CACNA1A-239ENST00000637297 ZNF280AP59817 542 aaPredicted RBP11.23□□□□□ -0.61
CACNA1A-239ENST00000637297 RASGRF1Q13972 1273 aa11.23□□□□□ -0.61
CACNA1A-239ENST00000637297 DLGAP5Q15398 846 aa11.23□□□□□ -0.61
CACNA1A-239ENST00000637297 ANKRD45Q5TZF3 282 aa11.23□□□□□ -0.61
CACNA1A-239ENST00000637297 TRPM4Q8TD43 1214 aa11.23□□□□□ -0.61
CACNA1A-239ENST00000637297 ZC3H15Q8WU90 426 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-239ENST00000637297 DCPSQ96C86 337 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-239ENST00000637297 GPATCH3Q96I76 525 aa11.23□□□□□ -0.61
CACNA1A-239ENST00000637297 TLR7Q9NYK1 1049 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-239ENST00000637297 SUGT1Q9Y2Z0 365 aa11.23□□□□□ -0.61
CACNA1A-239ENST00000637297 MCAMP43121 646 aa11.22□□□□□ -0.61
CACNA1A-239ENST00000637297 FSTL1Q12841 308 aa11.22□□□□□ -0.61
CACNA1A-239ENST00000637297 SCARF1Q14162 830 aa11.22□□□□□ -0.61
CACNA1A-239ENST00000637297 CFAP100Q494V2 611 aa11.22□□□□□ -0.61
CACNA1A-239ENST00000637297 MAP1SQ66K74 1059 aaPredicted RBP11.22□□□□□ -0.61
CACNA1A-239ENST00000637297 ERICH6Q7L0X2 663 aa11.22□□□□□ -0.61
CACNA1A-239ENST00000637297 SNRKQ9NRH2 765 aa11.22□□□□□ -0.61
CACNA1A-239ENST00000637297 HMG20BQ9P0W2 317 aa11.22□□□□□ -0.61
CACNA1A-239ENST00000637297 LRP2BPQ9P2M1 347 aa11.22□□□□□ -0.61
CACNA1A-239ENST00000637297 MYH2Q9UKX2 1941 aa11.22□□□□□ -0.61
CACNA1A-239ENST00000637297 AKAP11Q9UKA4 1901 aa11.21□□□□□ -0.61
CACNA1A-239ENST00000637297 PDS5AQ29RF7 1337 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms