RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 PRKG1Q13976 671 aa23.16■■□□□ 1.3
CTSD-209ENST00000637158 MAP3K11Q16584 847 aa23.16■■□□□ 1.3
CTSD-209ENST00000637158 SUPT20HL1Q3ZLR7 823 aa23.16■■□□□ 1.3
CTSD-209ENST00000637158 SPRYD7Q5W111 196 aa23.16■■□□□ 1.3
CTSD-209ENST00000637158 SLC10A4Q96EP9 437 aa23.16■■□□□ 1.3
CTSD-209ENST00000637158 CHMP3Q9Y3E7 222 aa23.16■■□□□ 1.3
CTSD-209ENST00000637158 PDE4DIPQ5VU43 2346 aa23.15■■□□□ 1.3
CTSD-209ENST00000637158 MANSC4A6NHS7 340 aaPredicted RBP23.15■■□□□ 1.3
CTSD-209ENST00000637158 FKTNO75072 461 aa23.15■■□□□ 1.3
CTSD-209ENST00000637158 FOXO4P98177 505 aa23.15■■□□□ 1.3
CTSD-209ENST00000637158 CCDC57Q2TAC2 916 aa23.15■■□□□ 1.3
CTSD-209ENST00000637158 IRS2Q9Y4H2 1338 aa23.14■■□□□ 1.3
CTSD-209ENST00000637158 ZBTB48P10074 688 aaPredicted RBP23.14■■□□□ 1.29
CTSD-209ENST00000637158 TAF7LQ5H9L4 462 aa23.14■■□□□ 1.29
CTSD-209ENST00000637158 BEND3Q5T5X7 828 aa23.14■■□□□ 1.29
CTSD-209ENST00000637158 FBXO46Q6PJ61 603 aaPredicted RBP23.14■■□□□ 1.29
CTSD-209ENST00000637158 HELBQ8NG08 1087 aaPredicted RBP23.14■■□□□ 1.29
CTSD-209ENST00000637158 EXOSC9Q06265 439 aaKnown RBP23.13■■□□□ 1.29
CTSD-209ENST00000637158 LDHAL6AQ6ZMR3 332 aa23.13■■□□□ 1.29
CTSD-209ENST00000637158 CERS5Q8N5B7 392 aa23.13■■□□□ 1.29
CTSD-209ENST00000637158 MRS2Q9HD23 443 aa23.13■■□□□ 1.29
CTSD-209ENST00000637158 CFAP100Q494V2 611 aa23.12■■□□□ 1.29
CTSD-209ENST00000637158 LMBR1LQ6UX01 489 aa23.12■■□□□ 1.29
CTSD-209ENST00000637158 SPDYE2BA6NHP3 402 aa23.11■■□□□ 1.29
CTSD-209ENST00000637158 SNAP23O00161 211 aa23.11■■□□□ 1.29
CTSD-209ENST00000637158 GRM8O00222 908 aa23.11■■□□□ 1.29
CTSD-209ENST00000637158 SPDYE6P0CI01 402 aa23.11■■□□□ 1.29
CTSD-209ENST00000637158 CNNM1Q9NRU3 951 aa23.11■■□□□ 1.29
CTSD-209ENST00000637158 F8W031 263 aaPredicted RBP23.1■■□□□ 1.29
CTSD-209ENST00000637158 C9orf78Q9NZ63 289 aaPredicted RBP23.1■■□□□ 1.29
CTSD-209ENST00000637158 F6X3S4 739 aa23.09■■□□□ 1.29
CTSD-209ENST00000637158 IREB2P48200 963 aaKnown RBP23.09■■□□□ 1.29
CTSD-209ENST00000637158 RBM5P52756 815 aaKnown RBP eCLIP23.09■■□□□ 1.29
CTSD-209ENST00000637158 TNFAIP1Q13829 316 aa23.09■■□□□ 1.29
CTSD-209ENST00000637158 OTUD7BQ6GQQ9 843 aa23.09■■□□□ 1.29
CTSD-209ENST00000637158 IFNL1Q8IU54 200 aa23.09■■□□□ 1.29
CTSD-209ENST00000637158 PRMT6Q96LA8 375 aaPredicted RBP23.09■■□□□ 1.29
CTSD-209ENST00000637158 VEZTQ9HBM0 779 aa23.09■■□□□ 1.29
CTSD-209ENST00000637158 PCDH10Q9P2E7 1040 aa23.09■■□□□ 1.29
CTSD-209ENST00000637158 SALL2Q9Y467 1007 aaPredicted RBP23.09■■□□□ 1.29
CTSD-209ENST00000637158 PLIN1O60240 522 aa23.08■■□□□ 1.29
CTSD-209ENST00000637158 ALDH1L1O75891 902 aa23.08■■□□□ 1.29
CTSD-209ENST00000637158 UBE4AQ14139 1066 aa23.08■■□□□ 1.29
CTSD-209ENST00000637158 PRPF38BQ5VTL8 546 aaKnown RBP23.08■■□□□ 1.29
CTSD-209ENST00000637158 CLRN2A0PK11 232 aa23.07■■□□□ 1.28
CTSD-209ENST00000637158 ANP32CO43423 234 aa23.07■■□□□ 1.28
CTSD-209ENST00000637158 WNK4Q96J92 1243 aa23.07■■□□□ 1.28
CTSD-209ENST00000637158 FAM205AQ6ZU69 1335 aa23.07■■□□□ 1.28
CTSD-209ENST00000637158 ANKRD13AQ8IZ07 590 aa23.06■■□□□ 1.28
CTSD-209ENST00000637158 ZNF594Q96JF6 807 aaPredicted RBP23.06■■□□□ 1.28
CTSD-209ENST00000637158 SERPINA10Q9UK55 444 aa23.06■■□□□ 1.28
CTSD-209ENST00000637158 FZD1Q9UP38 647 aa23.06■■□□□ 1.28
CTSD-209ENST00000637158 RASA3Q14644 834 aa23.05■■□□□ 1.28
CTSD-209ENST00000637158 EPHA10Q5JZY3 1008 aa23.05■■□□□ 1.28
CTSD-209ENST00000637158 SRCIN1Q9C0H9 1055 aa23.05■■□□□ 1.28
CTSD-209ENST00000637158 R3HDMLQ9H3Y0 253 aa23.05■■□□□ 1.28
CTSD-209ENST00000637158 PCDHAC2Q9Y5I4 1007 aa23.05■■□□□ 1.28
CTSD-209ENST00000637158 ECM29Q5VYK3 1845 aa23.04■■□□□ 1.28
CTSD-209ENST00000637158 HIBADHP31937 336 aaKnown RBP23.04■■□□□ 1.28
CTSD-209ENST00000637158 MFSD14BQ5SR56 506 aa23.04■■□□□ 1.28
CTSD-209ENST00000637158 NBPF12Q5TAG4 269 aaPredicted RBP23.04■■□□□ 1.28
CTSD-209ENST00000637158 INTS3Q68E01 1043 aaKnown RBP23.04■■□□□ 1.28
CTSD-209ENST00000637158 TDRD7Q8NHU6 1098 aaKnown RBP23.04■■□□□ 1.28
CTSD-209ENST00000637158 CLMNQ96JQ2 1002 aa23.04■■□□□ 1.28
CTSD-209ENST00000637158 SSC5DA1L4H1 1573 aa23.03■■□□□ 1.28
CTSD-209ENST00000637158 USP2O75604 605 aaPredicted RBP23.03■■□□□ 1.28
CTSD-209ENST00000637158 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.03■■□□□ 1.28
CTSD-209ENST00000637158 TTF2Q9UNY4 1162 aaKnown RBP23.03■■□□□ 1.28
CTSD-209ENST00000637158 JAG2Q9Y219 1238 aa23.03■■□□□ 1.28
CTSD-209ENST00000637158 SLC4A10Q6U841 1118 aa23.02■■□□□ 1.28
CTSD-209ENST00000637158 ERO1AQ96HE7 468 aa23.02■■□□□ 1.28
CTSD-209ENST00000637158 TRIM17Q9Y577 477 aa23.02■■□□□ 1.28
CTSD-209ENST00000637158 MROH5Q6ZUA9 1318 aa23.02■■□□□ 1.28
CTSD-209ENST00000637158 IGF2BP3O00425 579 aaKnown RBP eCLIP23.01■■□□□ 1.27
CTSD-209ENST00000637158 TNNI2P48788 182 aa23.01■■□□□ 1.27
CTSD-209ENST00000637158 SPDYE2Q495Y8 402 aa23.01■■□□□ 1.27
CTSD-209ENST00000637158 ZNF70Q9UC06 446 aaPredicted RBP23.01■■□□□ 1.27
CTSD-209ENST00000637158 A0A1B0GUL6 1792 aa23■■□□□ 1.27
CTSD-209ENST00000637158 TESPA1A2RU30 521 aaPredicted RBP23■■□□□ 1.27
CTSD-209ENST00000637158 VPS37DQ86XT2 251 aa23■■□□□ 1.27
CTSD-209ENST00000637158 FAM84BQ96KN1 310 aaPredicted RBP23■■□□□ 1.27
CTSD-209ENST00000637158 SPINK5Q9NQ38 1064 aaPredicted RBP23■■□□□ 1.27
CTSD-209ENST00000637158 GYG1P46976 350 aa22.99■■□□□ 1.27
CTSD-209ENST00000637158 OTOP1Q7RTM1 612 aa22.99■■□□□ 1.27
CTSD-209ENST00000637158 DZIP1LQ8IYY4 767 aaKnown RBP22.99■■□□□ 1.27
CTSD-209ENST00000637158 HTTP42858 3142 aa22.98■■□□□ 1.27
CTSD-209ENST00000637158 CAVIN4Q5BKX8 364 aa22.98■■□□□ 1.27
CTSD-209ENST00000637158 TBC1D22AQ8WUA7 517 aa22.98■■□□□ 1.27
CTSD-209ENST00000637158 TDRD3Q9H7E2 651 aaKnown RBP22.98■■□□□ 1.27
CTSD-209ENST00000637158 RIPOR2Q9Y4F9 1068 aa22.98■■□□□ 1.27
CTSD-209ENST00000637158 HDLBPQ00341 1268 aaKnown RBP22.97■■□□□ 1.27
CTSD-209ENST00000637158 CRHR2Q13324 411 aa22.97■■□□□ 1.27
CTSD-209ENST00000637158 ARHGEF6Q15052 776 aa22.97■■□□□ 1.27
CTSD-209ENST00000637158 OPTNQ96CV9 577 aa22.97■■□□□ 1.27
CTSD-209ENST00000637158 SUCLG2Q96I99 432 aa22.97■■□□□ 1.27
CTSD-209ENST00000637158 UTYO14607 1347 aa22.97■■□□□ 1.27
CTSD-209ENST00000637158 AOX1Q06278 1338 aa22.97■■□□□ 1.27
CTSD-209ENST00000637158 CENPFP49454 3210 aa22.97■■□□□ 1.27
CTSD-209ENST00000637158 CRKP46108 304 aa22.96■■□□□ 1.27
CTSD-209ENST00000637158 SP3Q02447 781 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms