RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.39■■□□□ 1.66
CLN8-213ENST00000637156 DPEP1P16444 411 aa25.38■■□□□ 1.65
CLN8-213ENST00000637156 TDRD7Q8NHU6 1098 aaKnown RBP25.38■■□□□ 1.65
CLN8-213ENST00000637156 COL1A1P02452 1464 aaPredicted RBP25.38■■□□□ 1.65
CLN8-213ENST00000637156 ADD2P35612 726 aa25.38■■□□□ 1.65
CLN8-213ENST00000637156 DPP8Q6V1X1 898 aaPredicted RBP25.38■■□□□ 1.65
CLN8-213ENST00000637156 TMX4Q9H1E5 349 aaPredicted RBP25.38■■□□□ 1.65
CLN8-213ENST00000637156 WWC3Q9ULE0 1092 aa25.38■■□□□ 1.65
CLN8-213ENST00000637156 UBE3CQ15386 1083 aa25.36■■□□□ 1.65
CLN8-213ENST00000637156 WASHC4Q2M389 1173 aa25.36■■□□□ 1.65
CLN8-213ENST00000637156 ZSCAN25Q6NSZ9 544 aa25.36■■□□□ 1.65
CLN8-213ENST00000637156 ZNF804AQ7Z570 1209 aa25.36■■□□□ 1.65
CLN8-213ENST00000637156 MAP4K1Q92918 833 aa25.36■■□□□ 1.65
CLN8-213ENST00000637156 PUS7LQ9H0K6 701 aaKnown RBP25.36■■□□□ 1.65
CLN8-213ENST00000637156 CD209Q9NNX6 404 aa25.36■■□□□ 1.65
CLN8-213ENST00000637156 ZNF219Q9P2Y4 722 aaPredicted RBP25.36■■□□□ 1.65
CLN8-213ENST00000637156 LRRC37AA6NMS7 1700 aa25.36■■□□□ 1.65
CLN8-213ENST00000637156 PDE6AP16499 860 aa25.36■■□□□ 1.65
CLN8-213ENST00000637156 HSPA4P34932 840 aa25.36■■□□□ 1.65
CLN8-213ENST00000637156 MAP3K12Q12852 859 aa25.36■■□□□ 1.65
CLN8-213ENST00000637156 TTLL6Q8N841 843 aa25.36■■□□□ 1.65
CLN8-213ENST00000637156 LRP2BPQ9P2M1 347 aa25.36■■□□□ 1.65
CLN8-213ENST00000637156 ABCF2Q9UG63 623 aa25.36■■□□□ 1.65
CLN8-213ENST00000637156 CCDC171Q6TFL3 1326 aa25.36■■□□□ 1.65
CLN8-213ENST00000637156 TCRBV5S4A2TA0A5A2 114 aa25.35■■□□□ 1.65
CLN8-213ENST00000637156 M0R2C6 588 aa25.35■■□□□ 1.65
CLN8-213ENST00000637156 PTGER2P43116 358 aa25.35■■□□□ 1.65
CLN8-213ENST00000637156 TGFB2P61812 414 aa25.35■■□□□ 1.65
CLN8-213ENST00000637156 APPBP2Q92624 585 aa25.35■■□□□ 1.65
CLN8-213ENST00000637156 IPO9Q96P70 1041 aaKnown RBP25.35■■□□□ 1.65
CLN8-213ENST00000637156 PALD1Q9ULE6 856 aa25.35■■□□□ 1.65
CLN8-213ENST00000637156 MAST3O60307 1309 aa25.35■■□□□ 1.65
CLN8-213ENST00000637156 PDS5AQ29RF7 1337 aaKnown RBP25.35■■□□□ 1.65
CLN8-213ENST00000637156 SLX4Q8IY92 1834 aa25.34■■□□□ 1.65
CLN8-213ENST00000637156 IL1R1P14778 569 aa25.34■■□□□ 1.65
CLN8-213ENST00000637156 ZNF532Q9HCE3 1301 aa25.34■■□□□ 1.65
CLN8-213ENST00000637156 RIMBP2O15034 1052 aa25.34■■□□□ 1.65
CLN8-213ENST00000637156 MAGEB6Q8N7X4 407 aa25.34■■□□□ 1.65
CLN8-213ENST00000637156 JAG2Q9Y219 1238 aa25.34■■□□□ 1.65
CLN8-213ENST00000637156 LTBP1Q14766 1721 aa25.34■■□□□ 1.65
CLN8-213ENST00000637156 CHAF1AQ13111 956 aaPredicted RBP25.33■■□□□ 1.65
CLN8-213ENST00000637156 ZC3H12CQ9C0D7 883 aaKnown RBP25.33■■□□□ 1.65
CLN8-213ENST00000637156 C21orf2O43822 256 aa25.32■■□□□ 1.64
CLN8-213ENST00000637156 NECTIN1Q15223 517 aa25.32■■□□□ 1.64
CLN8-213ENST00000637156 VPS53Q5VIR6 699 aa25.32■■□□□ 1.64
CLN8-213ENST00000637156 MCCP23508 829 aa25.31■■□□□ 1.64
CLN8-213ENST00000637156 RBM8AQ9Y5S9 174 aaKnown RBP25.31■■□□□ 1.64
CLN8-213ENST00000637156 DUOX1Q9NRD9 1551 aa25.31■■□□□ 1.64
CLN8-213ENST00000637156 RASEFQ8IZ41 740 aa25.3■■□□□ 1.64
CLN8-213ENST00000637156 RTFDC1Q9BY42 306 aaPredicted RBP25.3■■□□□ 1.64
CLN8-213ENST00000637156 MYO5AQ9Y4I1 1855 aaKnown RBP25.3■■□□□ 1.64
CLN8-213ENST00000637156 CC2D2BQ6DHV5 1058 aa25.3■■□□□ 1.64
CLN8-213ENST00000637156 ZNF384Q8TF68 577 aa25.3■■□□□ 1.64
CLN8-213ENST00000637156 RAI14Q9P0K7 980 aa25.3■■□□□ 1.64
CLN8-213ENST00000637156 PPP1R1BQ9UD71 204 aaPredicted RBP25.3■■□□□ 1.64
CLN8-213ENST00000637156 HSPD1P10809 573 aaKnown RBP25.29■■□□□ 1.64
CLN8-213ENST00000637156 ANAPC15P60006 121 aa25.29■■□□□ 1.64
CLN8-213ENST00000637156 IL17RAQ96F46 866 aa25.29■■□□□ 1.64
CLN8-213ENST00000637156 DDRGK1Q96HY6 314 aa25.29■■□□□ 1.64
CLN8-213ENST00000637156 WDR66Q8TBY9 1149 aa25.28■■□□□ 1.64
CLN8-213ENST00000637156 KCNB2Q92953 911 aa25.28■■□□□ 1.64
CLN8-213ENST00000637156 COA1Q9GZY4 146 aa25.28■■□□□ 1.64
CLN8-213ENST00000637156 PIM2Q9P1W9 311 aa25.28■■□□□ 1.64
CLN8-213ENST00000637156 SNED1Q8TER0 1413 aa25.28■■□□□ 1.64
CLN8-213ENST00000637156 GPAA1O43292 621 aa25.28■■□□□ 1.64
CLN8-213ENST00000637156 PRDX5P30044 214 aa25.28■■□□□ 1.64
CLN8-213ENST00000637156 ERICH6Q7L0X2 663 aa25.28■■□□□ 1.64
CLN8-213ENST00000637156 EYA3Q99504 573 aa25.28■■□□□ 1.64
CLN8-213ENST00000637156 CD2APQ9Y5K6 639 aa25.28■■□□□ 1.64
CLN8-213ENST00000637156 SRCAPQ6ZRS2 3230 aa25.27■■□□□ 1.64
CLN8-213ENST00000637156 SALL1Q9NSC2 1324 aa25.27■■□□□ 1.64
CLN8-213ENST00000637156 KIF13BQ9NQT8 1826 aa25.27■■□□□ 1.64
CLN8-213ENST00000637156 DOK7Q18PE1 504 aa25.27■■□□□ 1.64
CLN8-213ENST00000637156 ADGRA1Q86SQ6 560 aa25.27■■□□□ 1.64
CLN8-213ENST00000637156 DSCC1Q9BVC3 393 aa25.27■■□□□ 1.64
CLN8-213ENST00000637156 SNX14Q9Y5W7 946 aa25.27■■□□□ 1.64
CLN8-213ENST00000637156 FOXP2O15409 715 aa25.26■■□□□ 1.63
CLN8-213ENST00000637156 NSUN4Q96CB9 384 aaKnown RBP25.26■■□□□ 1.63
CLN8-213ENST00000637156 CACNA1SQ13698 1873 aa25.26■■□□□ 1.63
CLN8-213ENST00000637156 CYP7A1P22680 504 aa25.26■■□□□ 1.63
CLN8-213ENST00000637156 CREB3L3Q68CJ9 461 aa25.26■■□□□ 1.63
CLN8-213ENST00000637156 STRBPQ96SI9 672 aaKnown RBP25.26■■□□□ 1.63
CLN8-213ENST00000637156 MECOMQ03112 1051 aa25.25■■□□□ 1.63
CLN8-213ENST00000637156 RABEP1Q15276 862 aa25.25■■□□□ 1.63
CLN8-213ENST00000637156 SLC4A3P48751 1232 aa25.24■■□□□ 1.63
CLN8-213ENST00000637156 GRIK5Q16478 980 aa25.24■■□□□ 1.63
CLN8-213ENST00000637156 DOCK2Q92608 1830 aa25.24■■□□□ 1.63
CLN8-213ENST00000637156 SLC27A2O14975 620 aa25.23■■□□□ 1.63
CLN8-213ENST00000637156 NAA16Q6N069 864 aaPredicted RBP25.23■■□□□ 1.63
CLN8-213ENST00000637156 KLHL34Q8N239 644 aa25.23■■□□□ 1.63
CLN8-213ENST00000637156 ZGPATQ8N5A5 531 aaKnown RBP25.23■■□□□ 1.63
CLN8-213ENST00000637156 AIDAQ96BJ3 306 aa25.23■■□□□ 1.63
CLN8-213ENST00000637156 U3KPZ7 1027 aaPredicted RBP25.23■■□□□ 1.63
CLN8-213ENST00000637156 GRIPAP1Q4V328 841 aa25.23■■□□□ 1.63
CLN8-213ENST00000637156 SPTY2D1Q68D10 685 aaPredicted RBP25.23■■□□□ 1.63
CLN8-213ENST00000637156 RTKN2Q8IZC4 609 aa25.23■■□□□ 1.63
CLN8-213ENST00000637156 TBC1D2Q9BYX2 928 aa25.23■■□□□ 1.63
CLN8-213ENST00000637156 FAM205AQ6ZU69 1335 aa25.22■■□□□ 1.63
CLN8-213ENST00000637156 GTF2IP78347 998 aa25.22■■□□□ 1.63
CLN8-213ENST00000637156 CCDC93Q567U6 631 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms