RNA–Protein interactions for RNA: ENST00000636850.1

CHRNA7-220, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 916 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-220ENST00000636850 MTX1Q13505 466 aa25.63■■□□□ 1.69
CHRNA7-220ENST00000636850 CAVIN4Q5BKX8 364 aa25.63■■□□□ 1.69
CHRNA7-220ENST00000636850 ANGEL2Q5VTE6 544 aaKnown RBP25.63■■□□□ 1.69
CHRNA7-220ENST00000636850 ITPRIPQ8IWB1 547 aa25.63■■□□□ 1.69
CHRNA7-220ENST00000636850 SULF1Q8IWU6 871 aa25.63■■□□□ 1.69
CHRNA7-220ENST00000636850 ZNF408Q9H9D4 720 aa25.63■■□□□ 1.69
CHRNA7-220ENST00000636850 COPRSQ9NQ92 184 aa25.63■■□□□ 1.69
CHRNA7-220ENST00000636850 FAM205AQ6ZU69 1335 aa25.63■■□□□ 1.69
CHRNA7-220ENST00000636850 SASH1O94885 1247 aa25.62■■□□□ 1.69
CHRNA7-220ENST00000636850 IFIT1P09914 478 aaKnown RBP25.62■■□□□ 1.69
CHRNA7-220ENST00000636850 MMP14P50281 582 aa25.62■■□□□ 1.69
CHRNA7-220ENST00000636850 FKBP1AP62942 108 aaKnown RBP25.62■■□□□ 1.69
CHRNA7-220ENST00000636850 RASSF10A6NK89 507 aa25.61■■□□□ 1.69
CHRNA7-220ENST00000636850 SLC5A1P13866 664 aa25.61■■□□□ 1.69
CHRNA7-220ENST00000636850 FGFR2P21802 821 aa25.61■■□□□ 1.69
CHRNA7-220ENST00000636850 FBXO33Q7Z6M2 555 aa25.61■■□□□ 1.69
CHRNA7-220ENST00000636850 PITPNM2Q9BZ72 1349 aa25.61■■□□□ 1.69
CHRNA7-220ENST00000636850 IL15P40933 162 aaPredicted RBP25.6■■□□□ 1.69
CHRNA7-220ENST00000636850 NBPF9Q3BBW0 867 aa25.6■■□□□ 1.69
CHRNA7-220ENST00000636850 DLK2Q6UY11 383 aa25.6■■□□□ 1.69
CHRNA7-220ENST00000636850 CEP126Q9P2H0 1117 aa25.6■■□□□ 1.69
CHRNA7-220ENST00000636850 IQSEC3Q9UPP2 1182 aaPredicted RBP25.6■■□□□ 1.69
CHRNA7-220ENST00000636850 WNT10BO00744 389 aa25.59■■□□□ 1.69
CHRNA7-220ENST00000636850 ATP2B3Q16720 1220 aa25.59■■□□□ 1.69
CHRNA7-220ENST00000636850 MFSD14BQ5SR56 506 aa25.59■■□□□ 1.69
CHRNA7-220ENST00000636850 LPIN2Q92539 896 aa25.59■■□□□ 1.69
CHRNA7-220ENST00000636850 TLL2Q9Y6L7 1015 aa25.59■■□□□ 1.69
CHRNA7-220ENST00000636850 THSD7BQ9C0I4 1608 aa25.59■■□□□ 1.69
CHRNA7-220ENST00000636850 F8W031 263 aaPredicted RBP25.58■■□□□ 1.69
CHRNA7-220ENST00000636850 BCAMP50895 628 aa25.58■■□□□ 1.69
CHRNA7-220ENST00000636850 DEFB115Q30KQ5 88 aa25.58■■□□□ 1.69
CHRNA7-220ENST00000636850 RCAN3Q9UKA8 241 aa25.58■■□□□ 1.69
CHRNA7-220ENST00000636850 FRAT2O75474 233 aaPredicted RBP25.57■■□□□ 1.68
CHRNA7-220ENST00000636850 VEGFBP49765 207 aa25.57■■□□□ 1.68
CHRNA7-220ENST00000636850 CHAF1AQ13111 956 aaPredicted RBP25.56■■□□□ 1.68
CHRNA7-220ENST00000636850 PANK1Q8TE04 598 aa25.56■■□□□ 1.68
CHRNA7-220ENST00000636850 PNMA6EA0A0J9YXQ4 647 aa25.55■■□□□ 1.68
CHRNA7-220ENST00000636850 DLGAP5Q15398 846 aa25.55■■□□□ 1.68
CHRNA7-220ENST00000636850 PAXIP1Q6ZW49 1069 aaPredicted RBP25.55■■□□□ 1.68
CHRNA7-220ENST00000636850 SAPCD2Q86UD0 394 aa25.55■■□□□ 1.68
CHRNA7-220ENST00000636850 CDCA5Q96FF9 252 aa25.55■■□□□ 1.68
CHRNA7-220ENST00000636850 C1orf115Q9H7X2 142 aa25.55■■□□□ 1.68
CHRNA7-220ENST00000636850 PAPPA2Q9BXP8 1791 aa25.54■■□□□ 1.68
CHRNA7-220ENST00000636850 ZBED3Q96IU2 234 aaPredicted RBP25.54■■□□□ 1.68
CHRNA7-220ENST00000636850 SCAF8Q9UPN6 1271 aaKnown RBP25.54■■□□□ 1.68
CHRNA7-220ENST00000636850 MS4A1P11836 297 aa25.53■■□□□ 1.68
CHRNA7-220ENST00000636850 MTMR14Q8NCE2 650 aa25.53■■□□□ 1.68
CHRNA7-220ENST00000636850 TBC1D22AQ8WUA7 517 aa25.53■■□□□ 1.68
CHRNA7-220ENST00000636850 COL1A1P02452 1464 aaPredicted RBP25.53■■□□□ 1.68
CHRNA7-220ENST00000636850 ZBTB7BO15156 539 aaPredicted RBP25.52■■□□□ 1.68
CHRNA7-220ENST00000636850 CFAP100Q494V2 611 aa25.52■■□□□ 1.68
CHRNA7-220ENST00000636850 APOBEC3FQ8IUX4 373 aaKnown RBP25.52■■□□□ 1.68
CHRNA7-220ENST00000636850 GBA2Q9HCG7 927 aaPredicted RBP25.52■■□□□ 1.68
CHRNA7-220ENST00000636850 TTF2Q9UNY4 1162 aaKnown RBP25.52■■□□□ 1.68
CHRNA7-220ENST00000636850 ECE1P42892 770 aa25.51■■□□□ 1.67
CHRNA7-220ENST00000636850 CYP4F22Q6NT55 531 aa25.51■■□□□ 1.67
CHRNA7-220ENST00000636850 CAPNS2Q96L46 248 aa25.51■■□□□ 1.67
CHRNA7-220ENST00000636850 PCDHAC2Q9Y5I4 1007 aa25.51■■□□□ 1.67
CHRNA7-220ENST00000636850 WDR33Q9C0J8 1336 aaKnown RBP25.51■■□□□ 1.67
CHRNA7-220ENST00000636850 SPDYE2BA6NHP3 402 aa25.5■■□□□ 1.67
CHRNA7-220ENST00000636850 SPDYE6P0CI01 402 aa25.5■■□□□ 1.67
CHRNA7-220ENST00000636850 RBM5P52756 815 aaKnown RBP eCLIP25.5■■□□□ 1.67
CHRNA7-220ENST00000636850 TFCP2Q12800 502 aa25.5■■□□□ 1.67
CHRNA7-220ENST00000636850 GRM1Q13255 1194 aa25.5■■□□□ 1.67
CHRNA7-220ENST00000636850 C2orf69Q8N8R5 385 aa25.5■■□□□ 1.67
CHRNA7-220ENST00000636850 MYO1BO43795 1136 aa25.49■■□□□ 1.67
CHRNA7-220ENST00000636850 HSPA1AP0DMV8 641 aaKnown RBP25.49■■□□□ 1.67
CHRNA7-220ENST00000636850 HSPA1BP0DMV9 641 aaKnown RBP25.49■■□□□ 1.67
CHRNA7-220ENST00000636850 ADORA1P30542 326 aa25.49■■□□□ 1.67
CHRNA7-220ENST00000636850 HUNKP57058 714 aa25.49■■□□□ 1.67
CHRNA7-220ENST00000636850 POLA2Q14181 598 aa25.49■■□□□ 1.67
CHRNA7-220ENST00000636850 HHIPL1Q96JK4 782 aa25.49■■□□□ 1.67
CHRNA7-220ENST00000636850 GNL3LQ9NVN8 582 aaKnown RBP25.49■■□□□ 1.67
CHRNA7-220ENST00000636850 GRIK5Q16478 980 aa25.48■■□□□ 1.67
CHRNA7-220ENST00000636850 SERPINA10Q9UK55 444 aa25.48■■□□□ 1.67
CHRNA7-220ENST00000636850 AKAP2Q9Y2D5 859 aa25.48■■□□□ 1.67
CHRNA7-220ENST00000636850 A0A1B0GUL7 405 aa25.47■■□□□ 1.67
CHRNA7-220ENST00000636850 PHKA1P46020 1223 aa25.47■■□□□ 1.67
CHRNA7-220ENST00000636850 ATP8B2P98198 1209 aa25.47■■□□□ 1.67
CHRNA7-220ENST00000636850 G3BP1Q13283 466 aaKnown RBP eCLIP25.47■■□□□ 1.67
CHRNA7-220ENST00000636850 SSH3Q8TE77 659 aa25.47■■□□□ 1.67
CHRNA7-220ENST00000636850 PRMT6Q96LA8 375 aaPredicted RBP25.47■■□□□ 1.67
CHRNA7-220ENST00000636850 AOX1Q06278 1338 aa25.46■■□□□ 1.67
CHRNA7-220ENST00000636850 CLRN2A0PK11 232 aa25.46■■□□□ 1.67
CHRNA7-220ENST00000636850 MVPQ14764 893 aaKnown RBP25.46■■□□□ 1.67
CHRNA7-220ENST00000636850 PRAMEF18Q5VWM3 479 aa25.46■■□□□ 1.67
CHRNA7-220ENST00000636850 WDR66Q8TBY9 1149 aa25.46■■□□□ 1.67
CHRNA7-220ENST00000636850 SEMA3EO15041 775 aa25.45■■□□□ 1.66
CHRNA7-220ENST00000636850 CRKP46108 304 aa25.45■■□□□ 1.66
CHRNA7-220ENST00000636850 TIMM10P62072 90 aa25.45■■□□□ 1.66
CHRNA7-220ENST00000636850 SUGT1Q9Y2Z0 365 aa25.45■■□□□ 1.66
CHRNA7-220ENST00000636850 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.45■■□□□ 1.66
CHRNA7-220ENST00000636850 MAST3O60307 1309 aa25.44■■□□□ 1.66
CHRNA7-220ENST00000636850 MYH2Q9UKX2 1941 aa25.44■■□□□ 1.66
CHRNA7-220ENST00000636850 OS9Q13438 667 aaPredicted RBP25.44■■□□□ 1.66
CHRNA7-220ENST00000636850 CCDC102BQ68D86 513 aa25.44■■□□□ 1.66
CHRNA7-220ENST00000636850 CEP85Q6P2H3 762 aa25.44■■□□□ 1.66
CHRNA7-220ENST00000636850 VEZTQ9HBM0 779 aa25.44■■□□□ 1.66
CHRNA7-220ENST00000636850 COG6Q9Y2V7 657 aa25.44■■□□□ 1.66
CHRNA7-220ENST00000636850 NF2P35240 595 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms