RNA–Protein interactions for RNA: ENST00000636420.1

PCCA-212, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-212ENST00000636420 RNF25Q96BH1 459 aaPredicted RBP9.48□□□□□ -0.89
PCCA-212ENST00000636420 IFT57Q9NWB7 429 aa9.48□□□□□ -0.89
PCCA-212ENST00000636420 ZHX1Q9UKY1 873 aaPredicted RBP9.48□□□□□ -0.89
PCCA-212ENST00000636420 HEG1Q9ULI3 1381 aa9.47□□□□□ -0.89
PCCA-212ENST00000636420 TRPA1O75762 1119 aa9.47□□□□□ -0.89
PCCA-212ENST00000636420 IL13P35225 146 aa9.47□□□□□ -0.89
PCCA-212ENST00000636420 NUBP1P53384 320 aa9.47□□□□□ -0.89
PCCA-212ENST00000636420 KIF23Q02241 960 aaPredicted RBP9.47□□□□□ -0.89
PCCA-212ENST00000636420 CRY2Q49AN0 593 aa9.47□□□□□ -0.89
PCCA-212ENST00000636420 NBPF5PQ86XG9 351 aaPredicted RBP9.47□□□□□ -0.89
PCCA-212ENST00000636420 SIRT2Q8IXJ6 389 aa9.47□□□□□ -0.89
PCCA-212ENST00000636420 OTUD5Q96G74 571 aa9.47□□□□□ -0.89
PCCA-212ENST00000636420 CGNQ9P2M7 1197 aaKnown RBP9.47□□□□□ -0.89
PCCA-212ENST00000636420 ZNF330Q9Y3S2 320 aaPredicted RBP9.47□□□□□ -0.89
PCCA-212ENST00000636420 RPAP1Q9BWH6 1393 aaPredicted RBP9.46□□□□□ -0.9
PCCA-212ENST00000636420 KDM4AO75164 1064 aa9.46□□□□□ -0.9
PCCA-212ENST00000636420 ZNF853P0CG23 659 aa9.46□□□□□ -0.9
PCCA-212ENST00000636420 MCCP23508 829 aa9.46□□□□□ -0.9
PCCA-212ENST00000636420 GTF2E1P29083 439 aaPredicted RBP9.46□□□□□ -0.9
PCCA-212ENST00000636420 HUNKP57058 714 aa9.46□□□□□ -0.9
PCCA-212ENST00000636420 GNAI1P63096 354 aa9.46□□□□□ -0.9
PCCA-212ENST00000636420 LMOD3Q0VAK6 560 aa9.46□□□□□ -0.9
PCCA-212ENST00000636420 ATP2B3Q16720 1220 aa9.46□□□□□ -0.9
PCCA-212ENST00000636420 SLFNL1Q499Z3 407 aa9.46□□□□□ -0.9
PCCA-212ENST00000636420 DNTTIP2Q5QJE6 756 aaKnown RBP9.46□□□□□ -0.9
PCCA-212ENST00000636420 ANKRD44Q8N8A2 993 aa9.46□□□□□ -0.9
PCCA-212ENST00000636420 TRPM4Q8TD43 1214 aa9.46□□□□□ -0.9
PCCA-212ENST00000636420 ZNF408Q9H9D4 720 aa9.46□□□□□ -0.9
PCCA-212ENST00000636420 RBM27Q9P2N5 1060 aaKnown RBP9.46□□□□□ -0.9
PCCA-212ENST00000636420 ABCC12Q96J65 1359 aa9.45□□□□□ -0.9
PCCA-212ENST00000636420 SMTNL1A8MU46 457 aa9.45□□□□□ -0.9
PCCA-212ENST00000636420 NPHP1O15259 732 aa9.45□□□□□ -0.9
PCCA-212ENST00000636420 VAMP4O75379 141 aa9.45□□□□□ -0.9
PCCA-212ENST00000636420 MX1P20591 662 aa9.45□□□□□ -0.9
PCCA-212ENST00000636420 RGMBQ6NW40 437 aa9.45□□□□□ -0.9
PCCA-212ENST00000636420 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.45□□□□□ -0.9
PCCA-212ENST00000636420 DZIP3Q86Y13 1208 aaKnown RBP9.45□□□□□ -0.9
PCCA-212ENST00000636420 LARGE2Q8N3Y3 721 aa9.45□□□□□ -0.9
PCCA-212ENST00000636420 IPO4Q8TEX9 1081 aaKnown RBP9.45□□□□□ -0.9
PCCA-212ENST00000636420 MS4A3Q96HJ5 214 aa9.45□□□□□ -0.9
PCCA-212ENST00000636420 CSRNP1Q96S65 589 aa9.45□□□□□ -0.9
PCCA-212ENST00000636420 PAXBP1Q9Y5B6 917 aa9.45□□□□□ -0.9
PCCA-212ENST00000636420 ATP6V1DQ9Y5K8 247 aa9.45□□□□□ -0.9
PCCA-212ENST00000636420 MORC2Q9Y6X9 1032 aaPredicted RBP9.45□□□□□ -0.9
PCCA-212ENST00000636420 AOX1Q06278 1338 aa9.44□□□□□ -0.9
PCCA-212ENST00000636420 AK9Q5TCS8 1911 aa9.44□□□□□ -0.9
PCCA-212ENST00000636420 SHTN1A0MZ66 631 aa9.44□□□□□ -0.9
PCCA-212ENST00000636420 ALDH1B1P30837 517 aa9.44□□□□□ -0.9
PCCA-212ENST00000636420 GMPSP49915 693 aaPredicted RBP9.44□□□□□ -0.9
PCCA-212ENST00000636420 UBE2HP62256 183 aa9.44□□□□□ -0.9
PCCA-212ENST00000636420 CXCL9Q07325 125 aa9.44□□□□□ -0.9
PCCA-212ENST00000636420 PDE4CQ08493 712 aa9.44□□□□□ -0.9
PCCA-212ENST00000636420 PKP1Q13835 747 aa9.44□□□□□ -0.9
PCCA-212ENST00000636420 MTHFSDQ2M296 383 aaKnown RBP9.44□□□□□ -0.9
PCCA-212ENST00000636420 CC2D2BQ6DHV5 1058 aa9.44□□□□□ -0.9
PCCA-212ENST00000636420 CLEC4GQ6UXB4 293 aa9.44□□□□□ -0.9
PCCA-212ENST00000636420 ZC3H15Q8WU90 426 aaKnown RBP9.44□□□□□ -0.9
PCCA-212ENST00000636420 TMX3Q96JJ7 454 aa9.44□□□□□ -0.9
PCCA-212ENST00000636420 FUCA2Q9BTY2 467 aa9.44□□□□□ -0.9
PCCA-212ENST00000636420 DDX41Q9UJV9 622 aaKnown RBP9.44□□□□□ -0.9
PCCA-212ENST00000636420 RIC1Q4ADV7 1423 aa9.44□□□□□ -0.9
PCCA-212ENST00000636420 ADCY5O95622 1261 aa9.43□□□□□ -0.9
PCCA-212ENST00000636420 CAVIN2O95810 425 aa9.43□□□□□ -0.9
PCCA-212ENST00000636420 PIP4K2AP48426 406 aaPredicted RBP9.43□□□□□ -0.9
PCCA-212ENST00000636420 RNF20Q5VTR2 975 aa9.43□□□□□ -0.9
PCCA-212ENST00000636420 ZNF790Q6PG37 636 aa9.43□□□□□ -0.9
PCCA-212ENST00000636420 CDC37L1Q7L3B6 337 aa9.43□□□□□ -0.9
PCCA-212ENST00000636420 USP48Q86UV5 1035 aa9.43□□□□□ -0.9
PCCA-212ENST00000636420 ZGPATQ8N5A5 531 aaKnown RBP9.43□□□□□ -0.9
PCCA-212ENST00000636420 TEX13AQ9BXU3 409 aaPredicted RBP9.43□□□□□ -0.9
PCCA-212ENST00000636420 FAM53CQ9NYF3 392 aa9.43□□□□□ -0.9
PCCA-212ENST00000636420 SIPA1L3O60292 1781 aaPredicted RBP9.43□□□□□ -0.9
PCCA-212ENST00000636420 CCDC171Q6TFL3 1326 aa9.43□□□□□ -0.9
PCCA-212ENST00000636420 A0A0U1RQG5 324 aaPredicted RBP9.42□□□□□ -0.9
PCCA-212ENST00000636420 SLC10A3P09131 477 aa9.42□□□□□ -0.9
PCCA-212ENST00000636420 SDSP20132 328 aa9.42□□□□□ -0.9
PCCA-212ENST00000636420 HOXA10P31260 410 aaPredicted RBP9.42□□□□□ -0.9
PCCA-212ENST00000636420 CBX1P83916 185 aa9.42□□□□□ -0.9
PCCA-212ENST00000636420 NFE2L2Q16236 605 aa9.42□□□□□ -0.9
PCCA-212ENST00000636420 TPTE2Q6XPS3 522 aa9.42□□□□□ -0.9
PCCA-212ENST00000636420 KCND1Q9NSA2 647 aa9.42□□□□□ -0.9
PCCA-212ENST00000636420 TMEM51Q9NW97 253 aa9.42□□□□□ -0.9
PCCA-212ENST00000636420 CTNNA3Q9UI47 895 aa9.42□□□□□ -0.9
PCCA-212ENST00000636420 CUL9Q8IWT3 2517 aa9.42□□□□□ -0.9
PCCA-212ENST00000636420 RIOK3O14730 519 aaKnown RBP9.41□□□□□ -0.9
PCCA-212ENST00000636420 KCNQ3O43525 872 aa9.41□□□□□ -0.9
PCCA-212ENST00000636420 NEMFO60524 1076 aa9.41□□□□□ -0.9
PCCA-212ENST00000636420 DIAPH1O60610 1272 aaKnown RBP9.41□□□□□ -0.9
PCCA-212ENST00000636420 HMMRO75330 724 aa9.41□□□□□ -0.9
PCCA-212ENST00000636420 PKN2Q16513 984 aaKnown RBP9.41□□□□□ -0.9
PCCA-212ENST00000636420 AOC3Q16853 763 aa9.41□□□□□ -0.9
PCCA-212ENST00000636420 DCAF8Q5TAQ9 597 aa9.41□□□□□ -0.9
PCCA-212ENST00000636420 NIM1KQ8IY84 436 aa9.41□□□□□ -0.9
PCCA-212ENST00000636420 TTC5Q8N0Z6 440 aa9.41□□□□□ -0.9
PCCA-212ENST00000636420 IL17REQ8NFR9 667 aa9.41□□□□□ -0.9
PCCA-212ENST00000636420 CCDC102AQ96A19 550 aa9.41□□□□□ -0.9
PCCA-212ENST00000636420 CALCOCO1Q9P1Z2 691 aa9.41□□□□□ -0.9
PCCA-212ENST00000636420 NSFL1CQ9UNZ2 370 aaKnown RBP9.41□□□□□ -0.9
PCCA-212ENST00000636420 NIP7Q9Y221 180 aaKnown RBP eCLIP9.41□□□□□ -0.9
PCCA-212ENST00000636420 USP16Q9Y5T5 823 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms